Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Daldinia_20eschscholtzii_20[genbank_20GCA_5F000751375.1_202014-09-
06] 1,944 sequences; 35,539,942 total letters
Query= NC_015284.1
Length=183806
Score E
Sequences producing significant alignments: (Bits) Value
seq1409 109 6e-19
>seq1409
Length=14526
Score = 109 bits (120), Expect = 6e-19
Identities = 195/285 (68%), Gaps = 0/285 (0%)
Strand=Plus/Minus
Query 158406 AGGTGAGTGGGGATTTGACATTGCTGTAGGTAGTATGCAAAGGTTTGGTATTCCTATGGG 158465
||| || ||||| |||||| || | || || |||||| ||||| | || |||||
Sbjct 3194 AGGAGAATGGGGTGCTGACATCGCCTTCGGAAGCGCGCAAAGATTTGGCGTACCAATGGG 3135
Query 158466 ATACGGAGGTCCTCATGCTGCATTCTTTGCAACAACAGACAAGTATAAGAGAAAGATACC 158525
|| |||||||| |||||||| ||||| || || ||| | ||||| ||||| ||
Sbjct 3134 ATTTGGAGGTCCGCATGCTGCCTTCTTCGCCGTTCAGGAGAAGCACAAGAGGAAGATGCC 3075
Query 158526 TGGCAGAATTGTAGGTCAGTCAGTAGATAGCGAAGGTAATAAAGCATACAGATTAGCACT 158585
||| | | | || || ||| | || || || ||| | ||||| ||
Sbjct 3074 TGGACGGCTGATTGGCTTATCCAAGGATCGACTGGGCGGGAAGGCTTACCGGTTAGCCCT 3015
Query 158586 ACAGACTAGAGAGCAGCATATCAGAAGAGACAAAGCAACCAGTAACATCTGCACAGCACA 158645
||||| |||| || ||||| ||||||| || || || ||||| | |||||| | ||
Sbjct 3014 GCAGACGCGAGAACAACATATTCGAAGAGAGAAGGCGACTAGTAATGTGTGCACATCCCA 2955
Query 158646 AGCACTGCTGGCTAATATGTCTGGGTTCTATGCAGCATATCATGG 158690
|||||||||||| |||||| || |||| ||| ||||||||
Sbjct 2954 AGCACTGCTGGCCAATATGAATGCCCTCTACGCAATCTATCATGG 2910
Score = 87.8 bits (96), Expect = 2e-12
Identities = 153/220 (70%), Gaps = 2/220 (1%)
Strand=Plus/Minus
Query 157885 GGTCAAGGATACTATGGAAC-CATCACACCCCCAGTCATACAGCGAAACGTTCTTGAGAA 157943
|||||||| ||||||||||| ||| || || | || || || || ||||| || |||||
Sbjct 3745 GGTCAAGGTTACTATGGAACGCAT-ACCCCGGCTGTTATTCAACGGAACGTCCTGGAGAA 3687
Query 157944 TCCTAGTTGGTACACATCTTACACTCCCTATCAAGCTGAGATATCTCAGGGAAGATTGGA 158003
|| ||||| || ||||| || || || | || || ||||| | |||||
Sbjct 3686 CCCCGCCTGGTATACCAGCTACACCCCTTACCAGCCAGAAATTAGCCAGGGCCGCTTGGA 3627
Query 158004 AGCTTTATTCAATTACCAAACGCTCATCACAGAACTCACAGGACTACCGATAGCAAACGC 158063
| | | | || | |||||| | | || || || || ||||| |||||||| |||||
Sbjct 3626 ATCCCTTGTTAACTTCCAAACTGTGGTTACGGACCTAACGGGACTTCCGATAGCTAACGC 3567
Query 158064 ATCTCTATTAGATGAAGCAACTGCAGCAGCAGAAGCAATG 158103
||| || || |||| ||||| || || |||||||||
Sbjct 3566 CAGTCTTTTGGACGAAGGCACTGCCGCCGCCGAAGCAATG 3527
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 588036910355840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |