Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Daldinia_20eschscholtzii_20[genbank_20GCA_5F000751375.1_202014-09- 06] 1,944 sequences; 35,539,942 total letters Query= NC_015284.1 Length=183806 Score E Sequences producing significant alignments: (Bits) Value seq1409 109 6e-19 >seq1409 Length=14526 Score = 109 bits (120), Expect = 6e-19 Identities = 195/285 (68%), Gaps = 0/285 (0%) Strand=Plus/Minus Query 158406 AGGTGAGTGGGGATTTGACATTGCTGTAGGTAGTATGCAAAGGTTTGGTATTCCTATGGG 158465 ||| || ||||| |||||| || | || || |||||| ||||| | || ||||| Sbjct 3194 AGGAGAATGGGGTGCTGACATCGCCTTCGGAAGCGCGCAAAGATTTGGCGTACCAATGGG 3135 Query 158466 ATACGGAGGTCCTCATGCTGCATTCTTTGCAACAACAGACAAGTATAAGAGAAAGATACC 158525 || |||||||| |||||||| ||||| || || ||| | ||||| ||||| || Sbjct 3134 ATTTGGAGGTCCGCATGCTGCCTTCTTCGCCGTTCAGGAGAAGCACAAGAGGAAGATGCC 3075 Query 158526 TGGCAGAATTGTAGGTCAGTCAGTAGATAGCGAAGGTAATAAAGCATACAGATTAGCACT 158585 ||| | | | || || ||| | || || || ||| | ||||| || Sbjct 3074 TGGACGGCTGATTGGCTTATCCAAGGATCGACTGGGCGGGAAGGCTTACCGGTTAGCCCT 3015 Query 158586 ACAGACTAGAGAGCAGCATATCAGAAGAGACAAAGCAACCAGTAACATCTGCACAGCACA 158645 ||||| |||| || ||||| ||||||| || || || ||||| | |||||| | || Sbjct 3014 GCAGACGCGAGAACAACATATTCGAAGAGAGAAGGCGACTAGTAATGTGTGCACATCCCA 2955 Query 158646 AGCACTGCTGGCTAATATGTCTGGGTTCTATGCAGCATATCATGG 158690 |||||||||||| |||||| || |||| ||| |||||||| Sbjct 2954 AGCACTGCTGGCCAATATGAATGCCCTCTACGCAATCTATCATGG 2910 Score = 87.8 bits (96), Expect = 2e-12 Identities = 153/220 (70%), Gaps = 2/220 (1%) Strand=Plus/Minus Query 157885 GGTCAAGGATACTATGGAAC-CATCACACCCCCAGTCATACAGCGAAACGTTCTTGAGAA 157943 |||||||| ||||||||||| ||| || || | || || || || ||||| || ||||| Sbjct 3745 GGTCAAGGTTACTATGGAACGCAT-ACCCCGGCTGTTATTCAACGGAACGTCCTGGAGAA 3687 Query 157944 TCCTAGTTGGTACACATCTTACACTCCCTATCAAGCTGAGATATCTCAGGGAAGATTGGA 158003 || ||||| || ||||| || || || | || || ||||| | ||||| Sbjct 3686 CCCCGCCTGGTATACCAGCTACACCCCTTACCAGCCAGAAATTAGCCAGGGCCGCTTGGA 3627 Query 158004 AGCTTTATTCAATTACCAAACGCTCATCACAGAACTCACAGGACTACCGATAGCAAACGC 158063 | | | | || | |||||| | | || || || || ||||| |||||||| ||||| Sbjct 3626 ATCCCTTGTTAACTTCCAAACTGTGGTTACGGACCTAACGGGACTTCCGATAGCTAACGC 3567 Query 158064 ATCTCTATTAGATGAAGCAACTGCAGCAGCAGAAGCAATG 158103 ||| || || |||| ||||| || || ||||||||| Sbjct 3566 CAGTCTTTTGGACGAAGGCACTGCCGCCGCCGAAGCAATG 3527 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588036910355840