Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Daldinia_20eschscholtzii_20[genbank_20GCA_5F000751375.1_202014-09-
06] 1,944 sequences; 35,539,942 total letters
Query= NC_015398.1
Length=101487
Score E
Sequences producing significant alignments: (Bits) Value
seq600 109 4e-19
seq1817 87.8 1e-12
seq315 84.2 1e-11
>seq600
Length=9993
Score = 109 bits (120), Expect = 4e-19
Identities = 146/201 (73%), Gaps = 8/201 (4%)
Strand=Plus/Plus
Query 34785 GTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCG 34844
||||| || ||||| ||||| ||||| || ||| |||| |||| || ||||| || ||
Sbjct 644 GTGCTCTCCTTCTGGATGTTGTAGTCGGAGAGGGTTCGACCATCTTCGAGCTGCTTGCCC 703
Query 34845 GCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTG 34904
|| || |||| ||| || ||||| | || | ||||||||||| ||||||| |||
Sbjct 704 GCGAAGATTAATCGCTGTTGGTCGGGGGGGATTCCCTCCTTGTCCTGAATCTTCGACTTG 763
Query 34905 ACGGATGCTATCGAT----TCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAG 34960
|| || ||||||| || | | ||| || || | ||| || || || ||||||||
Sbjct 764 AC--AT--TATCGATGGTGTCGCTAGACTCCACCTCAAGGGTGATAGTCTTACCCGTGAG 819
Query 34961 AGTCTTCACAAAGATCTGCAT 34981
||||| || || ||||||||
Sbjct 820 GGTCTTGACGAAAATCTGCAT 840
>seq1817
Length=26529
Score = 87.8 bits (96), Expect = 1e-12
Identities = 139/197 (71%), Gaps = 8/197 (4%)
Strand=Plus/Minus
Query 34790 TTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAA 34849
||| ||||| ||||| ||||| || |||| | || |||||||| || || |||||
Sbjct 16772 TTCCTTCTGGATGTTGTAGTCGCTGAGAGTTCGGCCGTCTTCCAGCTGCTTACCCGCAAA 16713
Query 34850 TATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGA 34909
|| ||||| || || || | || | ||||||||||| ||||| || || |
Sbjct 16712 GATAAGTCGCTGTTGATCGGGGGGAATACCCTCCTTGTCCTGGATCTTGCTCTTCAC--A 16655
Query 34910 TGCTATCGAT----TCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCT 34965
| ||||||| || | |||||| || | ||| ||||| || || || | |||||
Sbjct 16654 T--TATCGATGGTGTCTGACGACTCAACCTCTAAGGTGATGGTCTTGCCGGTCAAAGTCT 16597
Query 34966 TCACAAAGATCTGCATA 34982
|||||||||||||||||
Sbjct 16596 TCACAAAGATCTGCATA 16580
Score = 86.0 bits (94), Expect = 4e-12
Identities = 130/183 (71%), Gaps = 8/183 (4%)
Strand=Plus/Minus
Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850
|| ||||||||||| ||||| || ||| |||| |||| || ||||| || ||||| ||
Sbjct 16543 TCCTTCTGAATGTTGTAGTCGGATAGGGTTCGGCCATCCTCAAGCTGCTTGCCGGCGAAA 16484
Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910
|| | ||| || ||||| | || | ||||||||||| |||||| || ||
Sbjct 16483 ATCAATCGCTGTTGGTCGGGAGGGATACCCTCCTTGTCTTGGATCTTCGACTTAAC---- 16428
Query 34911 GCTATCGAT--TCACCG--GCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTT 34966
| | ||||| | ||| | ||| || |||| ||| ||||| ||||| || || |||||
Sbjct 16427 GTTGTCGATAGTGTCCGAAGACTCCACCTCGAGGGTGATGGTCTTTCCGGTAAGGGTCTT 16368
Query 34967 CAC 34969
||
Sbjct 16367 GAC 16365
Score = 82.4 bits (90), Expect = 5e-11
Identities = 135/195 (69%), Gaps = 0/195 (0%)
Strand=Plus/Minus
Query 34790 TTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAA 34849
||| ||||| ||||| ||||| || | || |||| || || || ||||| || ||
Sbjct 16253 TTCCTTCTGGATGTTGTAGTCGCTCAGAGTGCGACCATCCTCAAGTTGCTTTCCAGCGAA 16194
Query 34850 TATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGA 34909
|| | ||| |||||||| | || | || ||||| || |||||| |||||||
Sbjct 16193 AATCAATCGCTGCTGGTCAGGAGGAATGCCTTCCTTATCCTGAATCTTGGATTTGACGTT 16134
Query 34910 TGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCAC 34969
| || | || || ||| || || | ||| ||||| || || ||||| ||||| ||
Sbjct 16133 GTCGATGGTGTCGGAGGACTCCACCTCAAGGGTGATGGTCTTGCCAGTGAGGGTCTTGAC 16074
Query 34970 AAAGATCTGCATATT 34984
||||||||||| ||
Sbjct 16073 GAAGATCTGCATGTT 16059
>seq315
Length=5603
Score = 84.2 bits (92), Expect = 1e-11
Identities = 132/187 (71%), Gaps = 8/187 (4%)
Strand=Plus/Plus
Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850
|| ||||| ||||| ||||| || ||| |||| | || || ||||| |||||||| ||
Sbjct 1111 TCCTTCTGGATGTTGTAGTCGGAGAGGGTTCGGCCGTCCTCGAGCTGCTTTCCGGCGAAG 1170
Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910
|| || || || ||||| | || | ||||||||||| ||||| ||||| ||
Sbjct 1171 ATCAGGCGCTGTTGGTCGGGGGGGATACCCTCCTTGTCCTGGATCTTGGACTTGAC--AT 1228
Query 34911 GCTATCGAT----TCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTT 34966
| ||||| || | ||| || |||| ||| ||||| || ||||| || |||||
Sbjct 1229 --TGTCGATGGTGTCGGAAGACTCCACCTCGAGGGTGATGGTCTTGCCCGTCAGGGTCTT 1286
Query 34967 CACAAAG 34973
||| |||
Sbjct 1287 CACGAAG 1293
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 324625908618432
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |