Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Daldinia_20eschscholtzii_20[genbank_20GCA_5F000751375.1_202014-09- 06] 1,944 sequences; 35,539,942 total letters Query= NC_015960.1 Length=175699 Score E Sequences producing significant alignments: (Bits) Value seq274 102 9e-17 >seq274 Length=11782 Score = 102 bits (112), Expect = 9e-17 Identities = 211/314 (67%), Gaps = 0/314 (0%) Strand=Plus/Plus Query 48126 TCAAATTCATCCCCATACACATTATCTAACCCAGGACATTCATTAGGACACATCAATGAC 48185 ||||||||||| || || |||| | | || || || ||| |||| ||||| | | | Sbjct 3013 TCAAATTCATCACCGTAGACATCGGCAAGACCCGGGCACTCACTAGGGCACATGAGGGTC 3072 Query 48186 CAATCCTCATCATTTTTTACTCTAGTCATAAATATATCTGGTATCCAAAGAGCTATAAAT 48245 || || | | || | || | |||| || | || || ||||| ||||| | || Sbjct 3073 CACTCGCCGTTCTTCTCAACACGCTTCATGAAAAGGTCAGGAATCCAGAGAGCGAGGAAA 3132 Query 48246 AAATCCCTAGTTCTTAGTTCTTCATTGCCACTATTCCTTTTAAGTTCAAGAAAGTCCATT 48305 | ||| | || | | |||||| || ||| ||| | ||| ||||| || || | Sbjct 3133 AGATCGCGAGCACGGACTTCTTCTTTACCATGGTTCTTGCGAAGGTCAAGGAACTCGAAG 3192 Query 48306 ATATCAGCATGCCATGGTTCTAAATATATTGCCATTACACCTGGTCGTTTATTACCTCCT 48365 | ||| ||||| ||||| | |||||| || | |||| || | || ||||| || Sbjct 3193 ACATCCTGGTGCCAGGGTTCGAGATATATAGCAAAGGCACCGGGCCTCTTGTTACCACCC 3252 Query 48366 TGATCTATATATCTGGCAGTATTGTTATAAACTCTTAACATTGGGACAATACCATTTGAT 48425 || || | |||||||| || ||||| |||||| ||||| || || |||||||| || Sbjct 3253 TGGTCAACGTATCTGGCGGTGTTGTTGAAAACTCGCAACATGGGCACGATACCATTAGAG 3312 Query 48426 ATACCATTGGTTCC 48439 ||||||| || || Sbjct 3313 GTACCATTCGTACC 3326 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 562095140756160