Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Daldinia_20eschscholtzii_20[genbank_20GCA_5F000751375.1_202014-09-
06] 1,944 sequences; 35,539,942 total letters
Query= NC_015960.1
Length=175699
Score E
Sequences producing significant alignments: (Bits) Value
seq274 102 9e-17
>seq274
Length=11782
Score = 102 bits (112), Expect = 9e-17
Identities = 211/314 (67%), Gaps = 0/314 (0%)
Strand=Plus/Plus
Query 48126 TCAAATTCATCCCCATACACATTATCTAACCCAGGACATTCATTAGGACACATCAATGAC 48185
||||||||||| || || |||| | | || || || ||| |||| ||||| | | |
Sbjct 3013 TCAAATTCATCACCGTAGACATCGGCAAGACCCGGGCACTCACTAGGGCACATGAGGGTC 3072
Query 48186 CAATCCTCATCATTTTTTACTCTAGTCATAAATATATCTGGTATCCAAAGAGCTATAAAT 48245
|| || | | || | || | |||| || | || || ||||| ||||| | ||
Sbjct 3073 CACTCGCCGTTCTTCTCAACACGCTTCATGAAAAGGTCAGGAATCCAGAGAGCGAGGAAA 3132
Query 48246 AAATCCCTAGTTCTTAGTTCTTCATTGCCACTATTCCTTTTAAGTTCAAGAAAGTCCATT 48305
| ||| | || | | |||||| || ||| ||| | ||| ||||| || || |
Sbjct 3133 AGATCGCGAGCACGGACTTCTTCTTTACCATGGTTCTTGCGAAGGTCAAGGAACTCGAAG 3192
Query 48306 ATATCAGCATGCCATGGTTCTAAATATATTGCCATTACACCTGGTCGTTTATTACCTCCT 48365
| ||| ||||| ||||| | |||||| || | |||| || | || ||||| ||
Sbjct 3193 ACATCCTGGTGCCAGGGTTCGAGATATATAGCAAAGGCACCGGGCCTCTTGTTACCACCC 3252
Query 48366 TGATCTATATATCTGGCAGTATTGTTATAAACTCTTAACATTGGGACAATACCATTTGAT 48425
|| || | |||||||| || ||||| |||||| ||||| || || |||||||| ||
Sbjct 3253 TGGTCAACGTATCTGGCGGTGTTGTTGAAAACTCGCAACATGGGCACGATACCATTAGAG 3312
Query 48426 ATACCATTGGTTCC 48439
||||||| || ||
Sbjct 3313 GTACCATTCGTACC 3326
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 562095140756160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |