Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Daldinia_20eschscholtzii_20[genbank_20GCA_5F000751375.1_202014-09-
06] 1,944 sequences; 35,539,942 total letters
Query= NC_016072.1
Length=1259197
Score E
Sequences producing significant alignments: (Bits) Value
seq1592 114 1e-19
seq33 105 5e-17
seq1834 87.8 1e-11
seq1817 86.0 5e-11
>seq1592
Length=100478
Score = 114 bits (126), Expect = 1e-19
Identities = 326/490 (67%), Gaps = 12/490 (2%)
Strand=Plus/Plus
Query 550053 TTGAAATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCACGG 550112
||||||| ||||||||||| || |||||| |||| || || || | || | |||||||
Sbjct 66501 TTGAAATCATTGCCAATGACCAGGGTAACCGAACCACACCCTCCTTCGTGGCCTTCACGG 66560
Query 550113 AAACTGAACATTTAGTTGGTGATGCAGCAAAATATCAAGCCACTGGTAATCCTACCAATA 550172
| || || | | || |||||||||| ||||| | || | | || || ||| || |
Sbjct 66561 ACACGGAGCGTCTAATTGGTGATGCCGCAAAGAACCAGGTCGCTATGAACCCTCAGAACA 66620
Query 550173 CTATTTTTGATGCTAAACGTTTAATTGGAAG-AAGTTTTAATGATTCGACTGTTCAGGCA 550231
| | || || ||||| ||| | ||||| | ||||| | | || | ||||||||
Sbjct 66621 CCGTCTTCGACGCTAAGCGTCTGATTGGTCGCAAGTTCTCA-GACCCTGAGGTTCAGGCC 66679
Query 550232 GATATGAAGCATTGGCCTTTCCAAATTGTTAATGTTTCTGGAAAACCTTATATTGAAG-C 550290
||||||||||| | || ||| | | || | ||| || ||| | |||| | |
Sbjct 66680 GATATGAAGCACTTCCCCTTCAAGGTCATTGACAAGAATGGCAAGCCTATTGTTGAGGTC 66739
Query 550291 TACTCATGAAGGATCTG-TTAAACAATTTTCACCAGAACAAATTTCATCTATGGTTTTAA 550349
| | |||| | | || || || | || ||| |||| || |||||||| | |
Sbjct 66740 GAGT--ACAAGGGTGAGACCAAGCAGTTCACCCCCGAAGAAATCTCCTCTATGGTCCTCA 66797
Query 550350 TGAAAATGAAACAAACAGC-CAGTGCT--TTTGTTGGTCAAGAAGTTACGGATGCAGTAA 550406
|| ||| | || || ||| || ||| ||| || || | | || || |
Sbjct 66798 CCAAGATGCGTGAGACCGCTGAGTCCTACCTTGGTGG-CA--CCGTCAACAACGCTGTCA 66854
Query 550407 TAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGGACGTA 550466
| |||||||| || || || || ||||| || ||||||||||| || || || || | |
Sbjct 66855 TCACTGTACCTGCCTACTTCAACGACTCTCAGCGTCAAGCTACCAAGGACGCCGGTCTCA 66914
Query 550467 TTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGCATATG 550526
||||||| || || || || || || ||||| || || || || ||||| | || || |
Sbjct 66915 TTGCTGGCCTAAACGTCCTCCGAATCATCAACGAGCCCACAGCCGCTGCCATCGCCTACG 66974
Query 550527 GACTTGATAA 550536
| ||||| ||
Sbjct 66975 GTCTTGACAA 66984
>seq33
Length=41058
Score = 105 bits (116), Expect = 5e-17
Identities = 111/146 (76%), Gaps = 0/146 (0%)
Strand=Plus/Minus
Query 550391 GTTACGGATGCAGTAATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACT 550450
|||| | |||| || | || || || || || || || ||||| || |||||||||||
Sbjct 18145 GTTAAGAATGCTGTCGTTACCGTGCCCGCCTACTTCAACGACTCCCAGCGTCAAGCTACC 18086
Query 550451 AAAGATGCTGGACGTATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCT 550510
|| || ||||| | || ||||| ||||| ||||| ||| || |||| ||||||||||||
Sbjct 18085 AAGGACGCTGGCCAGATCGCTGGTCTTAACGTTCTCCGTGTTGTCAACGAACCTACTGCT 18026
Query 550511 GCTGCACTTGCATATGGACTTGATAA 550536
||||| | || || || ||||| ||
Sbjct 18025 GCTGCCTTGGCTTACGGTCTTGAGAA 18000
>seq1834
Length=7267
Score = 87.8 bits (96), Expect = 1e-11
Identities = 123/173 (71%), Gaps = 0/173 (0%)
Strand=Plus/Minus
Query 550004 GATTTAGGAACCACATATAGTTGTGTTGGTGTTTGGCAAAATGGTAAAGTTGAAATTATT 550063
|| || |||||||||||| ||| |||||||| |||| | || || ||||||||| |
Sbjct 7045 GACTTGGGAACCACATATTCTTGCGTTGGTGTAATGCAACAAGGCAAGGTTGAAATTCTA 6986
Query 550064 GCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCACGGAAACTGAACAT 550123
| ||| || ||||| ||| ||| |||||| || || ||| | ||||| || || |
Sbjct 6985 GTCAACGACCAAGGAAACCGAATTACTCCTTCATACGTTGCCTTCACAGACGAAGAGCGA 6926
Query 550124 TTAGTTGGTGATGCAGCAAAATATCAAGCCACTGGTAATCCTACCAATACTAT 550176
|| ||||| || || || ||| | || || || ||||| | ||||| ||
Sbjct 6925 TTGGTTGGAGACGCCGCCAAACAACAGGCAGCTTCCAATCCCAGAAATACCAT 6873
>seq1817
Length=26529
Score = 86.0 bits (94), Expect = 5e-11
Identities = 154/220 (70%), Gaps = 4/220 (2%)
Strand=Plus/Minus
Query 563257 AGACGGAGTACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCT-AGAGTTCT 563315
||||| || || || || ||||| ||| || || ||||| || ||| ||||| |
Sbjct 16279 AGACGAAGGACGAGGTGGAGGGTGGATTCCTTCTGGATGTTGTAGTC-GCTCAGAGTGCG 16221
Query 563316 TGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTC 563375
||| |||||||| ||||| || ||||| | || ||||| ||||||||||| |||||
Sbjct 16220 ACCATCCTCAAGTTGCTTTCCAGCGAAAATCAATCGCTGCTGGTCAGGAGGAATGCCTTC 16161
Query 563376 TTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGTACA-TTCGAGAG 563434
||||| ||||| || ||| || || || || || | | || | || || || |
Sbjct 16160 CTTATCCTGAATCTTGGATTTGACGTTGTCGATGGTGTCGGAG-GACTCCACCTCAAGGG 16102
Query 563435 TAACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCAT 563474
| | || || ||||| || || || ||||| || |||||
Sbjct 16101 TGATGGTCTTGCCAGTGAGGGTCTTGACGAAGATCTGCAT 16062
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 4029193192512560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |