Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Daldinia_20eschscholtzii_20[genbank_20GCA_5F000751375.1_202014-09- 06] 1,944 sequences; 35,539,942 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq274 205 2e-47 seq1257 158 2e-33 >seq274 Length=11782 Score = 205 bits (226), Expect = 2e-47 Identities = 1002/1569 (64%), Gaps = 49/1569 (3%) Strand=Plus/Plus Query 212732 GTCAGCGGCCATGTCTATGATATCTCTCTGGGAGAGCTCCCACACGGTCTTGAAGATTTC 212791 |||||||||||| | | ||| || ||| |||| ||||| ||||||||| | | | Sbjct 2022 GTCAGCGGCCATCTGGACGATGGTTCGCTGAGAGATTTCCCAAACGGTCTTGTAAAGAGC 2081 Query 212792 TTTGAGGTCCTCTGGGAAGCCGGGGATGTTCTGCACAGACCC-CCTGTGT--ATGGTCAG 212848 |||||||||| | || | | || |||||||| | || || ||| | ||| | | Sbjct 2082 TTTGAGGTCCGCAGGAATGTTTGGAATGTTCTGAATTGAACCACCTTCGGCAATGATGCG 2141 Query 212849 CTGCAGGCGCATGTCCTCGTTCCAGAGGCCCCTGGTCTCCAGGCACTTGACCAGGTGAGG 212908 | | |||| || |||||| ||| || | ||| ||||| || ||| Sbjct 2142 GTTCTT---CATGCTGTCAGACCAGAGACCCATGTCAACAAGGTCCTTGAGCAACCAAGG 2198 Query 212909 GTTGACTATCTGGAAGTCACCTGAGAGCACCCTCCTCTGGTAAAAGTTTGAAGTGTAGGG 212968 ||| || | ||||| || || | || || | | ||||| ||| || |||||||| Sbjct 2199 GTTAACAACTTGGAACTCGCCAGCAAGGACACGACGAGAGTAAATGTTCGATGTGTAGGG 2258 Query 212969 CTCGATGCTCTCGTTGTTCCCCAGAATCTGTGCAGTGCTGGCTGTGGGCATGGGAGCCAC 213028 ||||| || |||||||| ||||||||||| | |||||| || |||||||| ||||| || Sbjct 2259 CTCGAAGCATTCGTTGTTACCCAGAATCTGGGAAGTGCTAGCAGTGGGCATAGGAGCAAC 2318 Query 213029 CAGGAGACTGTTCCTCACTCCGTGCTCGCCGATGAGGCGCCGAAGCTCTGCCCAGTCCCA 213088 | | ||||| | || || || | ||| | | ||| ||||| ||||| Sbjct 2319 TAACAAGCTGTTTCGTACACCATGTTGCTTGATTTGCTCCTTAAGGCTAGCCCAATCCCA 2378 Query 213089 TCTGCCAGACAGGTCCTCGTCCTTCACGTTCCACATGTCAAACTGCAAGATGCCTTTGCT 213148 || || | | || ||||||||||| | || | ||| || | Sbjct 2379 G---------AGATCACTGGGGGTGACATTCCACATGTCGTATTGTAGGATACCCTGAGA 2429 Query 213149 CACGGGGCTGCCCTGGTAAGAGGAGTAGGGGCCATGCTCCTTGGCCAGCTCGCAGGACGC 213208 || || || | ||||| ||||||| || | ||||||| | ||| ||| || Sbjct 2430 AACAGGAGAACCTTCGTAAGTCGAGTAGGTACCCTCGACCTTGGCGATCTCCACGGAGGC 2489 Query 213209 CTGCAGGGCAGCGTAGTAGATGGTTTCAAATATCTCCCTGTTGAGCTTCTTGGCCTCTGG 213268 || ||||| | ||| || || || || |||| | |||| | || ||||||| || Sbjct 2490 AGTTAGAGCAGCATGGTAAATAGTCTCGAAGATCTGCTTGTTCAACTGTCTGGCCTCCGG 2549 Query 213269 GGACGTGAAGGGCATCATCA-TGCGTTGGAACACATCAGCCAGCCCCTGGACCCCGATGC 213327 ||| ||| ||||| || ||| | |||| || || || ||||| || || | | Sbjct 2550 AGACTCGAATGGCATACGCAGTGC-TAGGAAGGTGTCTGCAAGACCCTGAACACCTAGAC 2608 Query 213328 CGATGGGTCTGTGTCTCAGGTTAGACTTGGAGCACTCCTCCAA-GGGGTAAAAGTTGCAG 213386 |||| || | ||| | || ||| ||| | || | || |||||| ||||| Sbjct 2609 CGATAGGACGGTGGCGCATGTTGCTGTTGC-GTGCTTCGGGAACGGGGTAGTAGTTGACA 2667 Query 213387 TCGATGATCTTGTTGAGGTTGCGGGTGGCCACTTTGGTGACATGGGCCAGGTACTCGTGA 213446 ||||| | |||| |||||| ||||| | || | ||| || | | ||| || || Sbjct 2668 TCGATAGTTCTGTTCAGGTTGTGGGTGACGACCTGGGTAACTTCGTGCAG---CTTTTG- 2723 Query 213447 TTGAACACGTAGCCCCCGTCC-TGCA--CAA--ACTCA-GGCAGGGCGATGCTGGCCAGG 213500 ||| | ||| |||| || | ||| | | | ||||| || | |||| | Sbjct 2724 --GAAGTCATAGGTACCGTTGGTGTAGTCAACGAATGACGGCAGCGCAAGAGACGCCAAG 2781 Query 213501 TTGCAAACGGCCACCTCCT-GAGAGTCTGTGTACTCCATGATCTCGGTGCACAGGTTGCT 213559 ||||| ||||| ||||| | | ||| | | |||||| || ||||| ||||||| ||| Sbjct 2782 TTGCAGACGGCTACCTCATCGGGAGCC-GAGTACTCGATAATCTCAGTGCACAAGTTAGA 2840 Query 213560 GCATCGGATGGTGCCCAGGTTCTGGTGGTTTGACTTTGCGTTGGCAGA-ATCCTTGTAGA 213618 | || || || || ||||||| || || ||| ||| | |||| ||||||||| | Sbjct 2841 ACTACGAATAGTTCCAAGGTTCTTCTGATTGCTCTT-GCGGTTGCAGTGATCCTTGTAAA 2899 Query 213619 GCATGTAGGGGGACCCGGTCTCTAGCTGGGACACCAGTATCTGGCTCCAGAGGTACCTGG 213678 ||||| |||| ||||||||| ||| | | |||| || | ||| || | | || Sbjct 2900 GCATGAAGGGATTCCCGGTCTCGGTCTGAGCCTCCAGAATGGCGTACCATAGTTTCTGGG 2959 Query 213679 CCTTGACCACCCGCCTGACAGCTCCGGGCGTAGCCTCGTACTGTTCGTAGAGCTCGTTGA 213738 |||| ||| | | | ||| | | | ||||| |||| ||||| | | | | Sbjct 2960 CCTTAACCTTCTGGC-GACCACGACCTTCT--GCCTCATACTTCTCGTACAAGGCTTCAA 3016 Query 213739 ATTCGTGGCCCCAGACCCTGTCCAGTCCCGGACAGGATGCGGGACACATGAGGCTCCAGT 213798 |||| | || |||| | | || ||||| || || ||||||||| |||| | Sbjct 3017 ATTCATCACCGTAGACATCGGCAAGACCCGGGCACTCACTAGGGCACATGAGGGTCCACT 3076 Query 213799 CCCCGT-CATCTCTGACTCTCTGCATGAACAGGTCCGGGACCCACAGCGCGGTGAACAGG 213857 | |||| | |||| || | || |||||| ||||| || | ||| || ||| ||| || Sbjct 3077 CGCCGTTCTTCTCA-ACACGCTTCATGAAAAGGTCAGGAATCCAGAGAGCGAGGAAAAGA 3135 Query 213858 TCCCTGGTCCTCCTCTCGTCCACTCCAGAGTTTTTGCGCAGATCTAGAAAGTCAAAGATG 213917 || | | | || || ||| ||| ||||| || || || || || |||| Sbjct 3136 TCGCGAGCACGGACTTCTTCTTTACCATGGTTCTTGCGAAGGTCAAGGAACTCGAAGACA 3195 Query 213918 TCCGCGTGCCACGGCTCCATGTAGATGGCAAAGGCGCCCGGCCTCTTG---CCGCCCTGG 213974 ||| |||||| || || | || || |||||||| || ||||||||| || |||||| Sbjct 3196 TCCTGGTGCCAGGGTTCGAGATATATAGCAAAGGCACCGGGCCTCTTGTTACCACCCTGG 3255 Query 213975 TCCACCAGCCTGGCCACCATGTTGAAGATGCGCAGGACGGGTACCAGCCCGTTGGACTGT 214034 || || ||||| ||||||| | |||| | ||| || | || || || Sbjct 3256 TCAACGTATCTGGCGGTGTTGTTGAAAACTCGCAACATGGGCACGATACCATTAGAGGTA 3315 Query 214035 CCGTTGGTTCCCGCTATATACGAGCCGGAGGCCC---TCAGGTTGCTCATGGAGAGCCCT 214091 || || || || || || || ||||| | || | || ||| | ||| ||| || Sbjct 3316 CCATTCGTACCGGCGATGTATGAGCCAGTAGCACGGATCCGGTGG---ATGTTGAGACCG 3372 Query 214092 ATGCCACCGGCGTACTTGGAGATCATGGCGCAGCGCCTCACAGTCTCCATGATGCCGGCC 214151 || || || || ||||||||||||||| ||| | | | || || ||| || | Sbjct 3373 ATACCTCCAGCTGTCTTGGAGATCATGGCACAGGTCTTGAGTGTGTCGTAGATACCCTCA 3432 Query 214152 ATGCTGTCATCTGTGAGGTTCAGCAAGAAGCAGCTCGAGAGCTGGGGCCTGGACGAGCCA 214211 || ||||| || | | || | ||||||||| | ||||| | | || | ||| Sbjct 3433 ATACTGTCTTCCTTCATGTCAACTAAGAAGCAGGAGGCCAGCTGTGCCTGGGGTGTTCCA 3492 Query 214212 GAGTTGAAAAGCGTGGGGCTGGCATGGATCATAAACTTGTTAGAGAGGAGCCTGTAGGTC 214271 | |||||||| |||||| || ||| | | | | ||| | || | || |||| ||| Sbjct 3493 GCATTGAAAAGAGTGGGGGAAGCGTGGGTGAAATATTTGCTGGACATAAGGTTGTAAGTC 3552 Query 214272 TCCAGGACT 214280 | | |||| Sbjct 3553 TGAATGACT 3561 >seq1257 Length=2089 Score = 158 bits (174), Expect = 2e-33 Identities = 343/506 (68%), Gaps = 13/506 (3%) Strand=Plus/Minus Query 47839 CTGGTAGTCCCCCACTCTATTCTCAAAGAAGTTTGTCTTCCCCTCCAACGAGATGTTCTC 47898 ||||||||| || || | ||||| |||||||| ||||| || | | ||||||||||| Sbjct 939 CTGGTAGTCACCGACACGCTTCTCGAAGAAGTTGGTCTTGCCACCAAGGGAGATGTTCTC 880 Query 47899 CATGAAGAGGAAGGGGTTGGGTGTGTTATACACCCGTGTCAG-GCCCATCTGTTCCAGCA 47957 ||||||| ||||||||||| | || ||| | || ||| | |||| | Sbjct 879 CATGAAGTCGAAGGGGTTGGTAGATCGGTAGACCT-TCTCGTTGCCGAGAGCGACCAGTA 821 Query 47958 GGTGATCCGCGACGTACTCGATGTATTTTGACATGAGGGTGATGTTCATGCCTATGAGGG 48017 || | || |||||| |||||||||||| ||| | | || ||||||||| | || | Sbjct 820 GGCGGTCGGCGACGAACTCGATGTATTGCTTCATCAAGTTGGCGTTCATGCCCAGCAGAG 761 Query 48018 ACAC-GGGCAAAGCCTTTGTGAGAAACTCCTTCTCTATCTGCACGGCTTCCCCCACAATC 48076 ||| ||||| ||||| || || || || | || || || || || | ||| Sbjct 760 -CACAGGGCAGAGCCTCAGTCAGGAATTCTTGTTCGATGGCGACAGCATCTGTGATGATC 702 Query 48077 TGCTTAACGCGGGACT---CTGAGGGTTTGTTGCGCAGGTGCTTGGCATAGAGCATGCAG 48133 | || | | | || | | | | || ||| ||||| || | || | ||| Sbjct 701 TTCTGGATGACGTCCTTGCCGGGGCGGTTCTTG---AGGTGTGTGA---ATAGTAGGCAA 648 Query 48134 GCAAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGACCA 48193 || ||||| |||||| || ||||| || ||||||| ||||||||||| ||||| Sbjct 647 GCGAAGTCAGTGTGCAGACCCTCGTCACGAGAGATGAGCTCGTTGGAGAAGGTAAGACCG 588 Query 48194 GGCATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAGATG 48253 ||||| | || | || || | ||||||||| | ||||| | |||| ||||||||| Sbjct 587 GGCATCAGACCACGCTTCTTCAACCAGAAAATGGAGGCGAATGCGCCACTGAAGAAGATA 528 Query 48254 CCCTCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCTTGTCTGAGATC 48313 ||||| || || || || || | || | || | |||| | ||||||||| |||||| Sbjct 527 CCCTCGACAGCAGCAAAGGCAATAAGACGCTGAGCAAAAGTGGAGTTCTTGTCAGAGATC 468 Query 48314 CAGGAAAGCGCCCAGTCTGCCTTCTT 48339 || || |||||||| |||||||| Sbjct 467 CATTGCAGAGCCCAGTCGGCCTTCTT 442 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 931510163752960