Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Daldinia_20eschscholtzii_20[genbank_20GCA_5F000751375.1_202014-09- 06] 1,944 sequences; 35,539,942 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq274 125 1e-23 seq1257 120 6e-22 >seq274 Length=11782 Score = 125 bits (138), Expect = 1e-23 Identities = 807/1267 (64%), Gaps = 55/1267 (4%) Strand=Plus/Plus Query 221417 GTCAGGGCAGCGTGGTAGATGGTCTCAAAGATCATCTTGTTGAGTCTCT-TGGCCTCGGG 221475 || || ||||| ||||| || ||||| |||||| |||||| | || | ||||||| || Sbjct 2491 GTTAGAGCAGCATGGTAAATAGTCTCGAAGATCTGCTTGTTCAA-CTGTCTGGCCTCCGG 2549 Query 221476 AGAAGTGAAGGGCATACGCAGCATCTGAAAGACGTCGGCCAGTCCCTGTACTCCGATACC 221535 ||| ||| ||||||||||| | ||| ||| || || ||||| || || | ||| Sbjct 2550 AGACTCGAATGGCATACGCAGTGCTAGGAAGGTGTCTGCAAGACCCTGAACACCTAGACC 2609 Query 221536 GATGGGCCTGTGTCTCCTGTTG--GAAGCGGCCGCTTCTGGCACGGGATAAAAGTTGACG 221593 ||| || | ||| | | ||||| | ||| ||||| || ||||| || ||||||| Sbjct 2610 GATAGGACGGTGGCGCATGTTGCTGTTGCG--TGCTTCGGGAACGGGGTAGTAGTTGACA 2667 Query 221594 TCGATCAGAT-TGTTGAGGTTCAGAGTGATGACTTTAACCACCTCGGTCAGCTTCTGGTG 221652 ||||| || | |||| ||||| | |||| ||| | || ||| |||||| || Sbjct 2668 TCGAT-AGTTCTGTTCAGGTTGTGGGTGACGACCTGGGTAACTTCGTGCAGCTTTTG--- 2723 Query 221653 ATTGAACACCAACTCGCCGCCGTCGTGGAGGGGTTCCACAAAAGCGTTTAGGGCAACGCT 221712 ||| | | ||| | ||| || || || || | || |||| Sbjct 2724 ---GAAGTCATAGGTACCG--TTGGTGTAG----TCAACGAATGACGGCAGCGCAAGAGA 2774 Query 221713 GGCCAGGTTACACACGGCCACCTCGTCCTTGTTGGTATACTGTATGATCTCTGTACAGAG 221772 |||| ||| || ||||| ||||| || | |||| || ||||| || || | Sbjct 2775 CGCCAAGTTGCAGACGGCTACCTCATCGGGAGCCGAGTACTCGATAATCTCAGTGCACAA 2834 Query 221773 GTTGCTGCACT--TGATGGTCCCCAGGTGATTGTGATTAGACTTGCGATTGGCAGCG-TC 221829 ||| | ||| || || || |||| || ||||| |||||| || |||| | || Sbjct 2835 GTT--AGAACTACGAATAGTTCCAAGGTTCTTCTGATTGCTCTTGCGGTT-GCAGTGATC 2891 Query 221830 CTTGTAGAGCATAAAGGGACCGCCAGTCTCCAGCTGAGCCACCAGAATCTTGTCCCAGAG 221889 |||||| ||||| |||||| || ||||| ||||||| ||||||| || ||| || Sbjct 2892 CTTGTAAAGCATGAAGGGATTCCCGGTCTCGGTCTGAGCCTCCAGAATGGCGTACCATAG 2951 Query 221890 TTCTCTGGCGCTCACCGTCCTCTTGACTGC-ACCCTCGGTCTTTTCATAC--CCGGTATA 221946 || ||||| || | | | || ||| | ||| || | | |||||| | ||| | Sbjct 2952 TT-TCTGGGCCTTAACCTTCTGGCGACCACGACCTTCTGCC---TCATACTTCTCGTACA 3007 Query 221947 GAGCATGTCAAACTTTTCACCGTACGCCTCGTCCAGGCCTGGACACCTGGCGGGACACAT 222006 || ||||| | |||||||| | ||| | || || || ||| || ||||| Sbjct 3008 AGGC--TTCAAATTCATCACCGTAGACATCGGCAAGACCCGGGCACTCACTAGGGCACAT 3065 Query 222007 CAGACTCCAGTGCTTGTTGTCTTTGACCCTCTGCATGAAGAGGTCCGGGATCCACAGCGC 222066 || |||| | ||| | | || | || |||||| ||||| || ||||| || || Sbjct 3066 GAGGGTCCACTCGCCGTTCTTCTCAACACGCTTCATGAAAAGGTCAGGAATCCAGAGAGC 3125 Query 222067 CTGAAAGAGATCTCTGGTCCG--CTGCTCCTCCACGCCGTTGTTTTTCCTCAGATCCAAA 222124 | || ||||| | | || || || || | || | ||| || | || || | Sbjct 3126 GAGGAAAAGATCGCGAGCACGGACTTCTTCTTTA--CCATGGTTCTTGCGAAGGTCAAGG 3183 Query 222125 AACTCAAAAATGTCAGCGTGCCACGGCTCCAGATAGACGGCCAGAGCGCCGGGTCGCTTG 222184 ||||| || | || |||||| || || ||||| | || | || ||||| | |||| Sbjct 3184 AACTCGAAGACATCCTGGTGCCAGGGTTCGAGATATATAGCAAAGGCACCGGGCCTCTTG 3243 Query 222185 TTGCCACCCTGATCCACCATCCTCTCCAGAGCGTTGAAGATGCGAAGGGTCGGTACCAGT 222244 || |||||||| || || || | |||||| | || | | || || | Sbjct 3244 TTACCACCCTGGTCAACGTATCTGGCGGTGTTGTTGAAAACTCGCAACATGGGCACGATA 3303 Query 222245 CCGTTGGATCGACCGTTGGTGCCCTTAATGTACGCACCGCCGGCCC---TCAGGTTACTG 222301 || || || ||| || || || ||||| | || || | || ||| | Sbjct 3304 CCATTAGAGGTACCATTCGTACCGGCGATGTATGAGCCAGTAGCACGGATCCGGTGGAT- 3362 Query 222302 GCAGACATGCCGATACCACCGGCGTGT-TTCGAGATCATGGCGCAGCTCTTGAGAGTGTC 222360 | || | |||||||| || || ||| || ||||||||||| ||| ||||||| ||||| Sbjct 3363 GTTGAGA--CCGATACCTCCAGC-TGTCTTGGAGATCATGGCACAGGTCTTGAGTGTGTC 3419 Query 222361 CATGATGCCCTCCATAGAGTCCTCCTTGACGTTCAGCAGAAAACAAGACGACATCTGAGA 222420 ||| ||||| ||| ||| ||||| | || | | || || || | || ||| | Sbjct 3420 GTAGATACCCTCAATACTGTCTTCCTTCATGTCAACTAAGAAGCAGGAGGCCAGCTGTGC 3479 Query 222421 TTTGGTGGAACAGGCGTTAAACAGCGTGGGACTGGCGTGTGTAAAGTAGCCCCTAGACAT 222480 | || | | || || || || ||||| ||||| || || || || ||||| Sbjct 3480 CTGGGGTGTTCCAGCATTGAAAAGAGTGGGGGAAGCGTGGGTGAAATATTTGCTGGACAT 3539 Query 222481 CAGATCGTACGTCTCTACGACTCTGGCGATGTTGTCCCCGTGAAT--CTGCATGGCGCAT 222538 || | ||| |||| | |||| | | | || || || ||| | || | | || Sbjct 3540 AAGGTTGTAAGTCTGAATGACTTTCTCTACATTATCGCCCCAAATACCAACA-GCCACA- 3597 Query 222539 CTCATGTACATGTACTGGGGCCTCTCCACA--GGACCCTTGGAGCTGGAGAGCAGGTACG 222596 | |||| ||||| ||| ||||| || ||| | | | ||||| || ||||| | Sbjct 3598 CGCATGATCATGTGCTGTGGCCTTTCTACAATCTTCTCATTGAGCT--TCAGTAGGTAAG 3655 Query 222597 ATTTTTCCAGAGTCTTGAACCCAAAGTAGTTGAGGTCAAAGTCTCTGCCGTGAACCACGG 222656 | | |||| |||||||| |||||||| | | || ||||||| | ||| || | | Sbjct 3656 ACCTCTCCAAGGTCTTGAAGCCAAAGTATTGGTAGTTGAAGTCTCGGTCGTAGACAATTG 3715 Query 222657 CGGCGTC 222663 ||| ||| Sbjct 3716 CGGAGTC 3722 >seq1257 Length=2089 Score = 120 bits (132), Expect = 6e-22 Identities = 304/467 (65%), Gaps = 11/467 (2%) Strand=Plus/Plus Query 25859 AGAGCGCTACGTTTGGCGAGCGGCTGGTAGCCTTTGCTGCTGTGGAGGGCATCTTTTTCA 25918 ||| | | || |||| |||| || | |||||||||||||| ||||| ||||| |||| Sbjct 479 AGAACTCCACTTTTGCTCAGCGTCTTATTGCCTTTGCTGCTGTCGAGGGTATCTTCTTCA 538 Query 25919 GCGGTTCGTTTGCGGCCATCTTCTGGCTCAAGCAGAAGGGGACCATGCCCGGGCTGTACT 25978 | || | || || |||| |||||| | ||| || || |||||||| || || Sbjct 539 GTGGCGCATTCGCCTCCATTTTCTGGTTGAAGAAGCGTGGTCTGATGCCCGGTCTTACCT 598 Query 25979 TTTCCAACGAGCTCATCAGCAGGGACGAGGGTCTCCACAGAGATTTTGCCTGCCTGCTCT 26038 | ||||||||||||||| | ||||||||||| |||| || || || ||||| || | Sbjct 599 TCTCCAACGAGCTCATCTCTCGTGACGAGGGTCTGCACACTGACTTCGCTTGCCTACTAT 658 Query 26039 ACACGGGCCACTTGCTCCACAA--ACCTTCTCAAGAGAC--CGTCTACAGTATCATCAAA 26094 ||| ||| ||| | || || |||| ||| | || | | ||||||| | Sbjct 659 TCAC---ACAC---CTCAAGAACCGCCCCGGCAAG-GACGTCATCCAGAAGATCATCACA 711 Query 26095 GAGGCTGTGGAGATCGAGAAGGAGTTTCNNNNNNNNNNNNNNNNNNNNNNNNNNNTGGGC 26154 || ||||| | ||||| | || || | ||||| Sbjct 712 GATGCTGTCGCCATCGAACAAGAATTCCTGACTGAGGCTCTGCCCTGTGCTCTGCTGGGC 771 Query 26155 ATGAACAACAGACTCATGAGCCAATACATTGAGTATGTGGCCGACCATCTGCTGTGCCAG 26214 |||||| || | |||| |||||||| |||| || ||||||| || ||| | Sbjct 772 ATGAACGCCAACTTGATGAAGCAATACATCGAGTTCGTCGCCGACCGCCTACTGGTCGCT 831 Query 26215 CTGGGACTCGCCAGACTCTACAGTACGCCTAACCCGTTCGACTTTATGGAAAACATATCG 26274 || || || | ||||| | | | ||||| |||||||| ||||| ||||| || Sbjct 832 CTCGGCAACGAGAAGGTCTACCGATCTACCAACCCCTTCGACTTCATGGAGAACATCTCC 891 Query 26275 TTGGAAGGGAAGACCAACTTCTTTGAAAAGAGGGTCGGCGACTATCA 26321 | | || |||||||||||||| || ||| | ||||| ||||| || Sbjct 892 CTTGGTGGCAAGACCAACTTCTTCGAGAAGCGTGTCGGTGACTACCA 938 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928822229071360