Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Daldinia_20eschscholtzii_20[genbank_20GCA_5F000751375.1_202014-09- 06] 1,944 sequences; 35,539,942 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq863 131 5e-25 seq917 93.3 1e-13 >seq863 Length=70956 Score = 131 bits (144), Expect = 5e-25 Identities = 185/260 (71%), Gaps = 0/260 (0%) Strand=Plus/Plus Query 302584 TTGATTAAACGACGCTGAATATAACCAGTTGTAGATGTTTTTACAGCTGTATCAATTAGA 302643 |||| | ||| ||||| |||||||| ||| || ||||| || ||||||||||| ||| Sbjct 48313 TTGACAAGACGGCGCTGGATATAACCGGTTTCAGCGGTTTTGACGGCTGTATCAATAAGA 48372 Query 302644 CCAACACGACCACCCATAGCATGGAAGAATAGCTCTTCCGGTCGTAGCCCCCCAATAAAG 302703 || |||||||| |||| || |||||||| | ||| || ||| || | | | | Sbjct 48373 CCTTCACGACCAGCCATGGCGTGGAAGAAGAACTCCGAAGGGGTTAGACCACGTAGATAC 48432 Query 302704 GAGCTCTCAACGAAACCACGCGCCTCGGGCGAATCGTCGAACTTGGTAAAGTGTGGCAGG 302763 ||| | || ||||| ||||| || || || || | |||| |||||| ||||| ||||| Sbjct 48433 GAGTTTTCGACGAATCCACGGGCTTCCGGAGAGTAGTCGTCCTTGGTGAAGTGGGGCAGA 48492 Query 302764 GTCCTGTTCTCATAGCCGTATGGGATACGCTTTCCATCAACGTTCTGCTGTCCCAGGCAC 302823 |||| || | ||||| | || |||||||| || ||||| | || || || | Sbjct 48493 GTCCGGTATTTGAAGCCGAAGGGAATACGCTTGCCTTCAACAATTTGTTGACCGACAAGG 48552 Query 302824 GAAATCATCTGCGAAATATT 302843 | |||||||||| ||||| Sbjct 48553 GCTGTCATCTGCGAGATATT 48572 >seq917 Length=16482 Score = 93.3 bits (102), Expect = 1e-13 Identities = 128/177 (72%), Gaps = 4/177 (2%) Strand=Plus/Minus Query 251485 GCACCGTGTGAAATCATACAATCACGCTCCATTTCACCGAAACGAAGACCACCATCGCGA 251544 |||||||| | |||||||| ||||| |||||||| |||||||| ||||| ||||| | | Sbjct 4450 GCACCGTGGGCTATCATACAGTCACGTTCCATTTCTCCGAAACGGAGACCTCCATCCCTA 4391 Query 251545 GCCCTACCCTCGGCAGGCTGACGAGTGAGATTAAC--CATAGGACCGATGGAGCGGCTAT 251602 || | ||| ||| |||| || || || | ||| | || ||||| | ||| | Sbjct 4390 GCACGACCTTCGACAGGTTGTCGGGTCA--TTATCTGCACGGGACCTCGCGCGCGAGCGT 4333 Query 251603 GTTGCTTATCATTTACCATATGCTTGAGACGCTGGTAGAATGCGGGACCGATGAAGA 251659 | ||| || | |||||||| ||||||||||||| | | |||||||| |||| Sbjct 4332 GGATCTTGTCGTCCACCATATGTCTGAGACGCTGGTAATACGTGGGACCGAAAAAGA 4276 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471780940703128