Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Daldinia_20eschscholtzii_20[genbank_20GCA_5F000751375.1_202014-09-
06] 1,944 sequences; 35,539,942 total letters
Query= NC_021858.1
Length=1908524
Score E
Sequences producing significant alignments: (Bits) Value
seq1365 109 7e-18
seq1257 109 7e-18
seq1151 87.8 2e-11
seq1061 86.0 8e-11
>seq1365
Length=27294
Score = 109 bits (120), Expect = 7e-18
Identities = 86/103 (83%), Gaps = 0/103 (0%)
Strand=Plus/Plus
Query 1592192 AACTACCTCGACATCAAGCCTCTGCTCGATCTTGGGTGCAAGTCTGTGGCCAACATGATC 1592251
|||||||| || |||||| | || | || |||| |||||| | || ||||||||||||
Sbjct 17344 AACTACCTGGATATCAAGGCGCTATTGGACGTTGGATGCAAGACCGTTGCCAACATGATC 17403
Query 1592252 AAGGGCAAGTCGCCCGAGGAGATCCGCAAGACCTTTAACATCA 1592294
||||||||||| ||||||||||| |||||||| || |||||||
Sbjct 17404 AAGGGCAAGTCCCCCGAGGAGATTCGCAAGACGTTCAACATCA 17446
>seq1257
Length=2089
Score = 109 bits (120), Expect = 7e-18
Identities = 220/322 (68%), Gaps = 7/322 (2%)
Strand=Plus/Minus
Query 868691 GCCTTGGCGTACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATC 868750
||||| ||| || || || ||| |||||| |||||||||||||| | || |||||
Sbjct 944 GCCTTCTGGTAGTCACCGACACGCTTCTCGAAGAAGTTGGTCTTGCCACCAAGGGAGATG 885
Query 868751 AACTCCATCCACGGGAACGGGTTGGGCGTCTTGTAGTGCTTTTCGCATCCGAGCGACGCG 868810
|||||| | ||| ||||||| | |||| ||| ||| ||||| | |
Sbjct 884 TTCTCCATGAAGTCGAAGGGGTTGGTAGATCGGTAGACCTTCTCGTTGCCGAGAGCGACC 825
Query 868811 AGCAGGCGGTCGGCGACAAACTCGATGTACTGGCACATGAGGCCGGCGTTCATGCCGATG 868870
|| |||||||||||||| ||||||||||| || ||| | | |||||||||||| |
Sbjct 824 AGTAGGCGGTCGGCGACGAACTCGATGTATTGCTTCATCAAGTTGGCGTTCATGCCCAGC 765
Query 868871 AGCGCCACCGGCAGCGACTCGCTCACAAACTCTTTCTCGATCTCGACGGCCTCGACGATG 868930
|| || ||||| | ||| ||| || |||| ||||| |||| || || ||||
Sbjct 764 AGAGCACAGGGCAGAGCCTCAGTCAGGAATTCTTGTTCGATGGCGACAGCATCTGTGATG 705
Query 868931 ATCTGCCTGGGCACGTC--GGCCGAGG-GCTTGTTGACGAGCATCGTGTAGAGCAGGCAG 868987
|||| | | ||||| |||| || | || |||| | | ||| | || |||||
Sbjct 704 ATCTTCTGGATGACGTCCTTGCCGGGGCGGTTCTTGAGGTG---TGTGAATAGTAGGCAA 648
Query 868988 GCAAAGTCGCAGTGCA-ACCCT 869008
|| ||||| ||||| |||||
Sbjct 647 GCGAAGTCAGTGTGCAGACCCT 626
Score = 95.1 bits (104), Expect = 1e-13
Identities = 139/195 (71%), Gaps = 9/195 (5%)
Strand=Plus/Minus
Query 869179 ACCTTCGTCGCGACTGATCATTTCGTTGCTAAAGGCGAGGCCGGGCATGAGGCCGCGCTT 869238
||| ||||| ||| ||| | |||||| |||| || |||||||| || || |||||
Sbjct 630 ACCCTCGTCACGAGAGATGAGCTCGTTGGAGAAGGTAAGACCGGGCATCAGACCACGCTT 571
Query 869239 CTTGAGCCAAAAGATGGCGCAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAA 869298
||| | ||| || |||| | ||| ||| ||| ||||| |||||||| || |||||
Sbjct 570 CTTCAACCAGAAAATGGAGGCGAATGCGCCACTGAAGAAGATACCCTCGACAGCAGCAAA 511
Query 869299 GCCGATGAGCCGCTCGGCAAAGGTGTCGAGGCCCTCCTTGTT---GATCCACTTCATCGC 869355
| | || || |||| ||||| ||| ||| | ||||| |||||| | || ||
Sbjct 510 GGCAATAAGACGCTGAGCAAAAGTG--GAG----TTCTTGTCAGAGATCCATTGCAGAGC 457
Query 869356 CCAGTCGGCCTTTTT 869370
|||||||||||| ||
Sbjct 456 CCAGTCGGCCTTCTT 442
>seq1151
Length=13603
Score = 87.8 bits (96), Expect = 2e-11
Identities = 101/136 (74%), Gaps = 0/136 (0%)
Strand=Plus/Plus
Query 93378 TAGGGACCGGGCAGGCCGCCCAAGGCGTCAAAGCACAGGGCAATGTCCTCGACGACGACC 93437
|| || |||||||| ||| | ||||| ||||||||| |||||||||||| |||
Sbjct 105 TACGGGCCGGGCAGCCCGTTGAGCGCGTCGAAGCACAGGCAGGTGTCCTCGACGAGGACG 164
Query 93438 GGACGCCCGAGAGCGGCGTAGGCGGCGAGGCACTTTTGGCGCGCGATCGCCTCGACGGTG 93497
|| | | || |||||| ||||||| ||||||| | | | || |||||| ||||
Sbjct 165 GGGCCCTGGACGGCGGCGGCGGCGGCGCGGCACTTCTCCCTGGTGACGTCCTCGAGGGTG 224
Query 93498 CCCTGCACCTCGGGCA 93513
||||| ||||||||||
Sbjct 225 CCCTGGACCTCGGGCA 240
>seq1061
Length=37579
Score = 86.0 bits (94), Expect = 8e-11
Identities = 136/195 (70%), Gaps = 0/195 (0%)
Strand=Plus/Plus
Query 1574067 GGACGCCACAAGGTGATCATCCTCGACGAGGCCGACTGCCTCACGTCGGCGGCCCAGCAG 1574126
|| || |||||| | | ||||||||||| |||||| | | || || | || ||||||
Sbjct 31843 GGCCGACACAAGATTGTAATCCTCGACGAAGCCGACAGTATGACTTCTGGTGCGCAGCAG 31902
Query 1574127 GCCCTGCGGTCCACCATGGAAAAGCACACCAACACGACGCGCTTTGCCCTGGCGTGCAAC 1574186
|| || || || ||||| | || |||| || || || |||||| | |||||||||
Sbjct 31903 GCGCTACGACGTACGATGGAGATTTACTCCAATACAACACGGTTTGCCTTCGCGTGCAAC 31962
Query 1574187 ACGTCGTCGATGGTCATCGAGGCCCTCCAAAGTCGCTGCGCCATTCTGCGCTTTGTGCGC 1574246
|||| | | |||||||| | || || || ||||| |||||||| | | ||
Sbjct 31963 CAGTCGAACAAGATCATCGAGCCGCTACAGTCACGATGCGCAATTCTGCGATACGGTCGG 32022
Query 1574247 CTGGGTGACGCCCAG 1574261
||| |||||||||
Sbjct 32023 CTGACGGACGCCCAG 32037
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 6106979666256248
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |