Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Daldinia_20eschscholtzii_20[genbank_20GCA_5F000751375.1_202014-09- 06] 1,944 sequences; 35,539,942 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq1365 109 7e-18 seq1257 109 7e-18 seq1151 87.8 2e-11 seq1061 86.0 8e-11 >seq1365 Length=27294 Score = 109 bits (120), Expect = 7e-18 Identities = 86/103 (83%), Gaps = 0/103 (0%) Strand=Plus/Plus Query 1592192 AACTACCTCGACATCAAGCCTCTGCTCGATCTTGGGTGCAAGTCTGTGGCCAACATGATC 1592251 |||||||| || |||||| | || | || |||| |||||| | || |||||||||||| Sbjct 17344 AACTACCTGGATATCAAGGCGCTATTGGACGTTGGATGCAAGACCGTTGCCAACATGATC 17403 Query 1592252 AAGGGCAAGTCGCCCGAGGAGATCCGCAAGACCTTTAACATCA 1592294 ||||||||||| ||||||||||| |||||||| || ||||||| Sbjct 17404 AAGGGCAAGTCCCCCGAGGAGATTCGCAAGACGTTCAACATCA 17446 >seq1257 Length=2089 Score = 109 bits (120), Expect = 7e-18 Identities = 220/322 (68%), Gaps = 7/322 (2%) Strand=Plus/Minus Query 868691 GCCTTGGCGTACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATC 868750 ||||| ||| || || || ||| |||||| |||||||||||||| | || ||||| Sbjct 944 GCCTTCTGGTAGTCACCGACACGCTTCTCGAAGAAGTTGGTCTTGCCACCAAGGGAGATG 885 Query 868751 AACTCCATCCACGGGAACGGGTTGGGCGTCTTGTAGTGCTTTTCGCATCCGAGCGACGCG 868810 |||||| | ||| ||||||| | |||| ||| ||| ||||| | | Sbjct 884 TTCTCCATGAAGTCGAAGGGGTTGGTAGATCGGTAGACCTTCTCGTTGCCGAGAGCGACC 825 Query 868811 AGCAGGCGGTCGGCGACAAACTCGATGTACTGGCACATGAGGCCGGCGTTCATGCCGATG 868870 || |||||||||||||| ||||||||||| || ||| | | |||||||||||| | Sbjct 824 AGTAGGCGGTCGGCGACGAACTCGATGTATTGCTTCATCAAGTTGGCGTTCATGCCCAGC 765 Query 868871 AGCGCCACCGGCAGCGACTCGCTCACAAACTCTTTCTCGATCTCGACGGCCTCGACGATG 868930 || || ||||| | ||| ||| || |||| ||||| |||| || || |||| Sbjct 764 AGAGCACAGGGCAGAGCCTCAGTCAGGAATTCTTGTTCGATGGCGACAGCATCTGTGATG 705 Query 868931 ATCTGCCTGGGCACGTC--GGCCGAGG-GCTTGTTGACGAGCATCGTGTAGAGCAGGCAG 868987 |||| | | ||||| |||| || | || |||| | | ||| | || ||||| Sbjct 704 ATCTTCTGGATGACGTCCTTGCCGGGGCGGTTCTTGAGGTG---TGTGAATAGTAGGCAA 648 Query 868988 GCAAAGTCGCAGTGCA-ACCCT 869008 || ||||| ||||| ||||| Sbjct 647 GCGAAGTCAGTGTGCAGACCCT 626 Score = 95.1 bits (104), Expect = 1e-13 Identities = 139/195 (71%), Gaps = 9/195 (5%) Strand=Plus/Minus Query 869179 ACCTTCGTCGCGACTGATCATTTCGTTGCTAAAGGCGAGGCCGGGCATGAGGCCGCGCTT 869238 ||| ||||| ||| ||| | |||||| |||| || |||||||| || || ||||| Sbjct 630 ACCCTCGTCACGAGAGATGAGCTCGTTGGAGAAGGTAAGACCGGGCATCAGACCACGCTT 571 Query 869239 CTTGAGCCAAAAGATGGCGCAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAA 869298 ||| | ||| || |||| | ||| ||| ||| ||||| |||||||| || ||||| Sbjct 570 CTTCAACCAGAAAATGGAGGCGAATGCGCCACTGAAGAAGATACCCTCGACAGCAGCAAA 511 Query 869299 GCCGATGAGCCGCTCGGCAAAGGTGTCGAGGCCCTCCTTGTT---GATCCACTTCATCGC 869355 | | || || |||| ||||| ||| ||| | ||||| |||||| | || || Sbjct 510 GGCAATAAGACGCTGAGCAAAAGTG--GAG----TTCTTGTCAGAGATCCATTGCAGAGC 457 Query 869356 CCAGTCGGCCTTTTT 869370 |||||||||||| || Sbjct 456 CCAGTCGGCCTTCTT 442 >seq1151 Length=13603 Score = 87.8 bits (96), Expect = 2e-11 Identities = 101/136 (74%), Gaps = 0/136 (0%) Strand=Plus/Plus Query 93378 TAGGGACCGGGCAGGCCGCCCAAGGCGTCAAAGCACAGGGCAATGTCCTCGACGACGACC 93437 || || |||||||| ||| | ||||| ||||||||| |||||||||||| ||| Sbjct 105 TACGGGCCGGGCAGCCCGTTGAGCGCGTCGAAGCACAGGCAGGTGTCCTCGACGAGGACG 164 Query 93438 GGACGCCCGAGAGCGGCGTAGGCGGCGAGGCACTTTTGGCGCGCGATCGCCTCGACGGTG 93497 || | | || |||||| ||||||| ||||||| | | | || |||||| |||| Sbjct 165 GGGCCCTGGACGGCGGCGGCGGCGGCGCGGCACTTCTCCCTGGTGACGTCCTCGAGGGTG 224 Query 93498 CCCTGCACCTCGGGCA 93513 ||||| |||||||||| Sbjct 225 CCCTGGACCTCGGGCA 240 >seq1061 Length=37579 Score = 86.0 bits (94), Expect = 8e-11 Identities = 136/195 (70%), Gaps = 0/195 (0%) Strand=Plus/Plus Query 1574067 GGACGCCACAAGGTGATCATCCTCGACGAGGCCGACTGCCTCACGTCGGCGGCCCAGCAG 1574126 || || |||||| | | ||||||||||| |||||| | | || || | || |||||| Sbjct 31843 GGCCGACACAAGATTGTAATCCTCGACGAAGCCGACAGTATGACTTCTGGTGCGCAGCAG 31902 Query 1574127 GCCCTGCGGTCCACCATGGAAAAGCACACCAACACGACGCGCTTTGCCCTGGCGTGCAAC 1574186 || || || || ||||| | || |||| || || || |||||| | ||||||||| Sbjct 31903 GCGCTACGACGTACGATGGAGATTTACTCCAATACAACACGGTTTGCCTTCGCGTGCAAC 31962 Query 1574187 ACGTCGTCGATGGTCATCGAGGCCCTCCAAAGTCGCTGCGCCATTCTGCGCTTTGTGCGC 1574246 |||| | | |||||||| | || || || ||||| |||||||| | | || Sbjct 31963 CAGTCGAACAAGATCATCGAGCCGCTACAGTCACGATGCGCAATTCTGCGATACGGTCGG 32022 Query 1574247 CTGGGTGACGCCCAG 1574261 ||| ||||||||| Sbjct 32023 CTGACGGACGCCCAG 32037 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6106979666256248