Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Daldinia_20eschscholtzii_20[genbank_20GCA_5F000751375.1_202014-09- 06] 1,944 sequences; 35,539,942 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq274 125 6e-24 seq1817 105 6e-18 >seq274 Length=11782 Score = 125 bits (138), Expect = 6e-24 Identities = 717/1130 (63%), Gaps = 54/1130 (5%) Strand=Plus/Plus Query 138508 ACCTGAAATTCACCGGCCAATACTCGACGAACGTAAATGTTGTTGGTGAAAGGCTCAAAC 138567 || || || || || || | || |||||| ||||||||| ||| | ||||| || Sbjct 2206 ACTTGGAACTCGCCAGCAAGGACACGACGAGAGTAAATGTTCGATGTGTAGGGCTCGAAG 2265 Query 138568 GATTCGTTGTTTCCCAGAATCTGAGCCGTGGTCGCGGTCGGCATGTACGCCACCAAAAGA 138627 |||||||||| ||||||||||| | ||| | || || ||||| || || || | Sbjct 2266 CATTCGTTGTTACCCAGAATCTGGGAAGTGCTAGCAGTGGGCATAGGAGCAACTAACAAG 2325 Query 138628 GAATTCCGTAAACCGTGAAGCTTGATTCGTTCCTTGAGCGACGACCAGTCCCACAAATCG 138687 || |||| ||| || |||||||| | ||||| || | ||| ||||| | ||| Sbjct 2326 CTGTTTCGTACACCATGTTGCTTGATTTGCTCCTTAAGGCTAGCCCAATCCCAGAGATCA 2385 Query 138688 CTAGGTTTTTTGTTCCACATATCGTACTGTAACATTCCCAAACTTGCGGGACTGCCTTCG 138747 || || | |||||||| ||||| |||| || ||| | | ||| |||||| Sbjct 2386 CTGGGGGTGACATTCCACATGTCGTATTGTAGGATACCCTGAGAAACAGGAGAACCTTCG 2445 Query 138748 TACGAATCGTA--TACACCAAACTCTTGCGCCAACTCGTTGCTCGCCTCGAGCGCACCAT 138805 || | ||| ||| | || |||| || | ||| | || || ||| ||| Sbjct 2446 TAAGTCGAGTAGGTACCCTCGAC-CTTG-GCGATCTCCACGGAGGCAGTTAGAGCAGCAT 2503 Query 138806 AGTAAATAGTTTCGGCAATCTGCTGATTGAGCAATCGGGCCTCGGCGCTCTCGTACGGCA 138865 ||||||||| ||| ||||||| || | | || |||||| | |||| | |||| Sbjct 2504 GGTAAATAGTCTCGAAGATCTGCTTGTTCAACTGTCTGGCCTCCGGAGACTCGAATGGCA 2563 Query 138866 TGCGGAGCATCGTGAACGCGTCGGCCAGCCCTTGCACGCCCACTCCGACAGGGCGATGGC 138925 | || || ||| | ||| || || || || || || | |||| ||| || |||| Sbjct 2564 TACGCAGTGCTAGGAAGGTGTCTGCAAGACCCTGAACACCTAGACCGATAGGACGGTGGC 2623 Query 138926 GCAGATTTGACGCTTTTGCG-GCTTCG---ATAGGATAATAGTTTACATCGATGATTTTG 138981 ||| || ||| ||||| |||||| | || || ||||| |||||||| || || Sbjct 2624 GCA----TGTTGCTGTTGCGTGCTTCGGGAACGGGGTAGTAGTTGACATCGATAGTTCTG 2679 Query 138982 TTTAAATTTCGCACGACCACCTTAGTCGTATGCTTTAATCGTTCAAAATCGTATGTGCCC 139041 || | || | ||| |||| || | | | || || || || || || Sbjct 2680 TTCAGGTTGTGGGTGACGACCTGGGTAACTTCGTGCAGCTTTTGGAAGTCATAGGTACCG 2739 Query 139042 CCGTTGTCGTCGACG-ACGTCGACAAATTTGTTGACACAAATCGAGGCTATGTTGCACAC 139100 | ||| ||| ||| | | || || | | || || || | |||||| || Sbjct 2740 TTGGTGTAGTCAACGAATGACGGCA---------GCGC-AAGAGACGCCAAGTTGCAGAC 2789 Query 139101 CGCCACTTCGTCGGGGTCGCTGTATTCGACAATTTCGGCACACAAATTACTACACTTGAT 139160 || || || ||||| | ||| |||| ||| || | ||||| ||| || || Sbjct 2790 GGCTACCTCATCGGGAGCCGAGTACTCGATAATCTCAGTGCACAAGTTAGAACTACGAAT 2849 Query 139161 CGTACCTAAATTTTGTTGATTGCTTTTTCGGTTACAAGCATCTTTGTAAAGCATATACGG 139220 || || | || | |||||||| || ||||| || ||| ||||||||||| | || Sbjct 2850 AGTTCCAAGGTTCTTCTGATTGCTCTTGCGGTTGCAGTGATCCTTGTAAAGCATGAAGGG 2909 Query 139221 TGTGCCAGTTTCCACTTGTGTCTCTATAATGAATTTGAACA-AGTCCCTAG--CTT--GT 139275 | || || || || | ||| | |||| | | || ||| || | ||| Sbjct 2910 ATTCCCGGTCTCGGTCTGAGCCTCCAGAATGGCGT--ACCATAGTTTCTGGGCCTTAACC 2967 Query 139276 ATTTGACG--CACGTAAAGTTCGTCGCGCTCGTACTTTTCGTAGAGTTCGTCGAATCGTT 139333 | || || |||| | ||| | ||| ||||| ||||| | | || ||| | Sbjct 2968 TTCTGGCGACCACG--ACCTTCTGC---CTCATACTTCTCGTACAAGGCTTCAAATTCAT 3022 Query 139334 CACCGTAGGCGTCAGAAAGATCGCGACACTTGTCAGGACACATGAGCGACCATACGCCGT 139393 |||||||| | || | |||| | | |||| ||| |||||||| | ||| |||||| Sbjct 3023 CACCGTAGACATCGGCAAGACCCGGGCACTCACTAGGGCACATGAGGGTCCACTCGCCGT 3082 Query 139394 TCGCCTTGACGCGCCTCATGAACAGATCCGGAATCCACAAAGCGAACAGCAAATCGCGCG 139453 || || || ||| ||||||| || || |||||||| | ||||| | | |||||| | Sbjct 3083 TCTTCTCAACACGCTTCATGAAAAGGTCAGGAATCCAGAGAGCGAGGAAAAGATCGCGAG 3142 Query 139454 C-----CTTCTTATCTTCCGAACCCATGTTACGTTTC--ATGTTAAGGAAATCAAAAACG 139506 | ||||| |||| ||||| | | || | | || |||||| || || || Sbjct 3143 CACGGACTTCT--TCTT----TACCATGGTTC-TTGCGAAGGTCAAGGAACTCGAAGACA 3195 Query 139507 TCAGCGTGCCATGGTTCCAGATAGATGGCCATTGCGCCTTTCCGTTTG---CCACCTTGA 139563 || |||||| ||||| ||||| || || | || || || ||| ||||| || Sbjct 3196 TCCTGGTGCCAGGGTTCGAGATATATAGCAAAGGCACCGGGCCTCTTGTTACCACCCTGG 3255 Query 139564 TCGACGTGTCGTACAGCATTATTGAATACGCGCAACATCGGCTCCAGACC 139613 || |||| || | | || ||||| || |||||||| ||| | | ||| Sbjct 3256 TCAACGTATCTGGCGGTGTTGTTGAAAACTCGCAACATGGGCACGATACC 3305 >seq1817 Length=26529 Score = 105 bits (116), Expect = 6e-18 Identities = 142/194 (73%), Gaps = 3/194 (2%) Strand=Plus/Plus Query 24719 AAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACCGACACAGTAGA-AAC 24777 || || || ||||| || || || || ||||| || || | | ||||| | || ||| Sbjct 16368 AAGACCCTTACCGGAAAGACCATCACCCTCGAGGTGGAGTCTTCGGACACTATCGACAAC 16427 Query 24778 GGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAACAACGTTTGATCTT 24837 | ||| | || |||||||||||| || || || |||||||| ||||| || ||||| || Sbjct 16428 GTTAAGTCGAA-GATCCAAGACAAGGAGGGTATCCCTCCCGACCAACAGCGATTGATTTT 16486 Query 24838 TGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAACATTCAAAAGGAATC 24897 ||||| || ||||| |||||| ||| | | || || || |||||||| ||||| || Sbjct 16487 CGCCGGCAAGCAGCTTGAGGATGGCCGAACCCTATCCGACTACAACATTCAGAAGGAGTC 16546 Query 24898 GACACTACA-CTTG 24910 || || || |||| Sbjct 16547 TACTCTCCATCTTG 16560 Score = 87.8 bits (96), Expect = 2e-12 Identities = 150/214 (70%), Gaps = 8/214 (4%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||||||||| | || || | || || || || || || || || || ||| | | Sbjct 16809 ATGCAGATCTTCGTCAAGACCTTGACAGGAAAGACGATCACTCTGGAGGTTGAATCATCG 16868 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || |||||||| ||||| ||||| || || || || ||| Sbjct 16869 GACACGATTGACAACGTCAAGAGCAAGATCCAGGACAAGGAAGGCATTCCCCCTGACCAA 16928 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGAT--TCGAGAAACATGTCA--GATTA 24879 ||||| | ||||| || || || ||| |||||||| ||| || | | | || || Sbjct 16929 CAACGACTTATCTTCGCTGGTAAGCAGTTGGAGGATGGTCG---CAC-TCTAAGCGACTA 16984 Query 24880 TAACATTCAAAAGGAATCGACACTACACTTGGTG 24913 ||||| || ||||| ||||| || ||||||||| Sbjct 16985 CAACATCCAGAAGGAGTCGACGCTGCACTTGGTG 17018 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449886667488320