Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Daldinia_20eschscholtzii_20[genbank_20GCA_5F000751375.1_202014-09- 06] 1,944 sequences; 35,539,942 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq1257 116 6e-20 seq1365 100 5e-15 >seq1257 Length=2089 Score = 116 bits (128), Expect = 6e-20 Identities = 177/252 (70%), Gaps = 0/252 (0%) Strand=Plus/Minus Query 793891 TGACGCCCGCCTTGGCATACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGA 793950 |||| || ||||| || || || || ||| |||||| |||||||||||||| | | Sbjct 952 TGACACCGGCCTTCTGGTAGTCACCGACACGCTTCTCGAAGAAGTTGGTCTTGCCACCAA 893 Query 793951 GCGAGATCAACTCCATCCACGGGAACGGGTTGGCCGTCAGGTAGTGCTTCTCGCACCCGA 794010 | ||||| |||||| | ||| ||||||| | ||||| ||||||| |||| Sbjct 892 GGGAGATGTTCTCCATGAAGTCGAAGGGGTTGGTAGATCGGTAGACCTTCTCGTTGCCGA 833 Query 794011 GCGACGCAAGCAGGCGGTCGGCGACGAATTCAATGTACTGGCACATGAGGGCGGCGTTCA 794070 | | | || ||||||||||||||||| || ||||| || ||| | | |||||||| Sbjct 832 GAGCGACCAGTAGGCGGTCGGCGACGAACTCGATGTATTGCTTCATCAAGTTGGCGTTCA 773 Query 794071 TGCCGATGAGCGCCACGGGCAGCGACTCGCTGACAAACTCTTTCTCGATCTCGACGGCCT 794130 |||| | || || |||||| | ||| | | || |||| ||||| |||| || | Sbjct 772 TGCCCAGCAGAGCACAGGGCAGAGCCTCAGTCAGGAATTCTTGTTCGATGGCGACAGCAT 713 Query 794131 CGATGATGATCT 794142 | ||||||||| Sbjct 712 CTGTGATGATCT 701 Score = 93.3 bits (102), Expect = 7e-13 Identities = 92/119 (77%), Gaps = 0/119 (0%) Strand=Plus/Minus Query 794548 GTGTCGATGGCGCGAAAGAGGTGGTCCTTCTCGACCGGGTCCTTGACGTAGGTGTCGATG 794607 ||||| || ||| ||||| ||| ||||| | | || ||||||| ||| ||||| ||| Sbjct 367 GTGTCAATAGCGTTGAAGAGATGGGTCTTCTGGGCGGGTTCCTTGATGTAAGTGTCAATG 308 Query 794608 AGGAGCGAGTAGGTCTCTGAGTGGATGTTTTCGATGGCGATCTGGAAGCCATAAAAGCA 794666 || || ||||| ||||| ||||||||||| || || ||||||||| || || ||||| Sbjct 307 AGCAGGGAGTAAGTCTCGGAGTGGATGTTCTCCATCATGATCTGGAAACCGTAGAAGCA 249 >seq1365 Length=27294 Score = 100 bits (110), Expect = 5e-15 Identities = 84/103 (82%), Gaps = 0/103 (0%) Strand=Plus/Plus Query 2035653 AACTACCTCGACATCAAGCCCCTCCTCGATTTGGGGTGCAAGACCGTGGCCAACCTTATC 2035712 |||||||| || |||||| | || | || | || ||||||||||| |||||| | ||| Sbjct 17344 AACTACCTGGATATCAAGGCGCTATTGGACGTTGGATGCAAGACCGTTGCCAACATGATC 17403 Query 2035713 AAGGGCAAGTCGCCCGAGGACATCCGCAAGACCTTTAACATCA 2035755 ||||||||||| |||||||| || |||||||| || ||||||| Sbjct 17404 AAGGGCAAGTCCCCCGAGGAGATTCGCAAGACGTTCAACATCA 17446 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7916039607853416