Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Daldinia_20eschscholtzii_20[genbank_20GCA_5F000751375.1_202014-09-
06] 1,944 sequences; 35,539,942 total letters
Query= NC_024625.1
Length=151109
Score E
Sequences producing significant alignments: (Bits) Value
seq1817 129 6e-25
seq315 118 1e-21
seq600 111 2e-19
>seq1817
Length=26529
Score = 129 bits (142), Expect = 6e-25
Identities = 150/200 (75%), Gaps = 2/200 (1%)
Strand=Plus/Minus
Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGC 133521
|||||| || ||||| || ||||| |||| || ||| ||| | ||||| || ||||| |
Sbjct 16259 GGTGGATTCCTTCTGGATGTTGTAGTCGCTCAGAGTGCGACCA-TCCTCAAGTTGCTTTC 16201
Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581
| ||| |||| | ||||||||||| ||||| ||||||||||| || ||||| |
Sbjct 16200 CAGCGAAAATCAATCGCTGCTGGTCAGGAGGAATGCCTTCCTTATCCTGAATCTTGGATT 16141
Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641
||| | || | ||||||| || |||||| || | ||||| ||| ||||| || || |
Sbjct 16140 TGACGTTGTCGATGGTGTCGGAGGACTCCACCTCAAGGGTGATGGTCTTGCCAGTGAGGG 16081
Query 133642 TTTTTACGAAAATCTGCATG 133661
| || ||||| |||||||||
Sbjct 16080 TCTTGACGAAGATCTGCATG 16061
Score = 102 bits (112), Expect = 8e-17
Identities = 137/188 (73%), Gaps = 2/188 (1%)
Strand=Plus/Minus
Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522
|| ||||| ||||| || ||||| ||| | || | | | ||||| |||||||||||
Sbjct 16549 GTAGACTCCTTCTGAATGTTGTAGTCGGATAGGGTTCGGCCA-TCCTCAAGCTGCTTGCC 16491
Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582
||| |||| | ||||| |||||||||||||| || |||||||| |||||| |||
Sbjct 16490 GGCGAAAATCAATCGCTGTTGGTCGGGAGGGATACCCTCCTTGTCTTGGATCTTCGACTT 16431
Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642
| | || | ||||| | | |||||| |||| ||||| ||| || ||||| || ||
Sbjct 16430 AACGTTGTCGATAGTGTCCGAAGACTCCACCTCGAGGGTGATGGTCTTTCCGGTAAGGGT 16371
Query 133643 TTTTACGA 133650
|| ||||
Sbjct 16370 CTTGACGA 16363
Score = 98.7 bits (108), Expect = 1e-15
Identities = 142/198 (72%), Gaps = 2/198 (1%)
Strand=Plus/Minus
Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522
|| ||||| ||||| || ||||| |||| | ||| ||| | ||||| | |||||| ||
Sbjct 17005 GTCGACTCCTTCTGGATGTTGTAGTCGCTTAGAGTGCGACCA-TCCTCCAACTGCTTACC 16947
Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582
||| | || || || || ||||| || || |||||||||||||| |||||| |||
Sbjct 16946 AGCGAAGATAAGTCGTTGTTGGTCAGGGGGAATGCCTTCCTTGTCCTGGATCTTGCTCTT 16887
Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642
|| | |||| |||||| | | || || || | |||| || || || |||| ||
Sbjct 16886 GACGTTGTCAATCGTGTCCGATGATTCAACCTCCAGAGTGATCGTCTTTCCTGTCAAGGT 16827
Query 133643 TTTTACGAAAATCTGCAT 133660
|| ||||| ||||||||
Sbjct 16826 CTTGACGAAGATCTGCAT 16809
>seq315
Length=5603
Score = 118 bits (130), Expect = 1e-21
Identities = 142/191 (74%), Gaps = 4/191 (2%)
Strand=Plus/Plus
Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGT--GGACGAGTCCTCGAGCTGCTTG 133520
||| ||||| ||||| || ||||| ||| | || || || ||||||||||||||
Sbjct 1104 GGTAGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTTCGGCCG--TCCTCGAGCTGCTTT 1161
Query 133521 CCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGC 133580
|| ||| | || || ||||| |||||||| ||||| || |||||||| |||||| |
Sbjct 1162 CCGGCGAAGATCAGGCGCTGTTGGTCGGGGGGGATACCCTCCTTGTCCTGGATCTTGGAC 1221
Query 133581 TTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGA 133640
|||| | || | ||||||| | |||||| |||| ||||| ||| ||||| |||||
Sbjct 1222 TTGACATTGTCGATGGTGTCGGAAGACTCCACCTCGAGGGTGATGGTCTTGCCCGTCAGG 1281
Query 133641 GTTTTTACGAA 133651
|| || |||||
Sbjct 1282 GTCTTCACGAA 1292
>seq600
Length=9993
Score = 111 bits (122), Expect = 2e-19
Identities = 146/200 (73%), Gaps = 2/200 (1%)
Strand=Plus/Plus
Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGC 133521
|||| ||| ||||| || ||||| ||| | || ||| | || |||||||||||||
Sbjct 643 GGTGCTCTCCTTCTGGATGTTGTAGTCGGAGAGGGTTCGACCA-TCTTCGAGCTGCTTGC 701
Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581
||||| | || | ||||| |||||||| ||||| || |||||||| ||||| ||
Sbjct 702 CCGCGAAGATTAATCGCTGTTGGTCGGGGGGGATTCCCTCCTTGTCCTGAATCTTCGACT 761
Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641
||| | || | |||||| | | |||||| || | ||||| || || || || || |
Sbjct 762 TGACATTATCGATGGTGTCGCTAGACTCCACCTCAAGGGTGATAGTCTTACCCGTGAGGG 821
Query 133642 TTTTTACGAAAATCTGCATG 133661
| || |||||||||||||||
Sbjct 822 TCTTGACGAAAATCTGCATG 841
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 483409052874560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |