Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Daldinia_20eschscholtzii_20[genbank_20GCA_5F000751375.1_202014-09- 06] 1,944 sequences; 35,539,942 total letters Query= NC_026440.1 Length=2243109 Score E Sequences producing significant alignments: (Bits) Value seq1257 104 3e-16 >seq1257 Length=2089 Score = 104 bits (114), Expect = 3e-16 Identities = 181/258 (70%), Gaps = 4/258 (2%) Strand=Plus/Plus Query 1456518 AGCAGATCATCGTCGAGGCCGTCGAGATCGAGAAAGAGTTTGTCAGCGAGTCGCTGCCGG 1456577 || |||||||| || || |||| ||||| |||| || | | ||| | ||||| Sbjct 698 AGAAGATCATCACAGATGCTGTCGCCATCGAACAAGAATTCCTGACTGAGGCTCTGCCCT 757 Query 1456578 TGGCGCTCATCGGCATGAACGCCACCGCTCATGTGCCAGTACATTGAATTTTGTCGCCGA 1456637 || || | ||||||||||||| | | ||| || ||||| || || |||||||| Sbjct 758 GTGCTCTGCTGGGCATGAACGCCAACT-TGATGAAGCAATACATCGAGTTC-GTCGCCGA 815 Query 1456638 CCGCCTGCTCGCGGCGCTCGGCTGCGGAGAAGCACTACCGGACGGCCAACCCGTTCCCAT 1456697 |||||| || | || |||||| || ||||| |||||| | ||||||| ||| | Sbjct 816 CCGCCTACTGGTCGCTCTCGGCAACG-AGAAGGTCTACCGATCTACCAACCCCTTCGACT 874 Query 1456698 GGATGGAGTTGATCTCGCTCGAGGGCAAGACCAACTTTTTCGAGCGCCGCGT-GGCGAGT 1456756 |||||| ||||| || | |||||||||||||| |||||| || || || || | Sbjct 875 TCATGGAGAACATCTCCCTTGGTGGCAAGACCAACTTCTTCGAGAAGCGTGTCGGTGACT 934 Query 1456757 ACGCCAAGGCCGGCGTCA 1456774 || |||||||| |||| Sbjct 935 ACCAGAAGGCCGGTGTCA 952 Score = 87.8 bits (96), Expect = 3e-11 Identities = 98/131 (75%), Gaps = 0/131 (0%) Strand=Plus/Plus Query 1455976 CCAGAGGCACGTTTGTTTTACGGGTTCCAGATCGCCATCGAAAACATCCACTCTGAAACC 1456035 || ||||| || | || ||||| ||||||||| || || ||||||||||| || || Sbjct 237 CCTGAGGCGCGATGCTTCTACGGTTTCCAGATCATGATGGAGAACATCCACTCCGAGACT 296 Query 1456036 TACTCGCTCCTGATCGACACCTACGTCAAGGACCCGGTCGAGAAGGACCACCTCTTTCGC 1456095 ||||| || || || ||||| ||| ||||||| || | | ||||| ||| ||||| | Sbjct 297 TACTCCCTGCTCATTGACACTTACATCAAGGAACCCGCCCAGAAGACCCATCTCTTCAAC 356 Query 1456096 GCCATCGACAC 1456106 || || ||||| Sbjct 357 GCTATTGACAC 367 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7177623697626928