Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Daldinia_20eschscholtzii_20[genbank_20GCA_5F000751375.1_202014-09-
06] 1,944 sequences; 35,539,942 total letters
Query= NC_026511.1
Length=140913
Score E
Sequences producing significant alignments: (Bits) Value
seq1817 129 5e-25
>seq1817
Length=26529
Score = 129 bits (142), Expect = 5e-25
Identities = 166/229 (72%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 35508 TTCCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGG 35567
|||||||||||| | | || | ||| | ||| ||||| || |||||||| |||
Sbjct 16809 TTCCACCACGTAGTCGGAGAACGAGATGGAGGGTAGATTCCTTCTGGATGTTGTAGTCGC 16750
Query 35568 CCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAG 35627
| ||||| |||| |||||||||||||||||||| || | ||||| || || | |
Sbjct 16749 TGAGAGTTCGGCCGTCTTCCAGCTGCTTACCCGCAAAGATAAGTCGCTGTTGATCGGGGG 16690
Query 35628 GAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCA 35687
||| | |||||||||| |||||| ||||| | | | | ||||| ||| || |
Sbjct 16689 GAATACCCTCCTTGTCCTGGATCTTGCTCTTCACATTATCGATGGTGTCTGACGACTCAA 16630
Query 35688 CCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736
|||| | ||||| || || || |||||||| |||||||| ||||||||
Sbjct 16629 CCTCTAAGGTGATGGTCTTGCCGGTCAAAGTCTTCACAAAGATCTGCAT 16581
Score = 86.0 bits (94), Expect = 6e-12
Identities = 122/169 (72%), Gaps = 2/169 (1%)
Strand=Plus/Minus
Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604
|||||| ||||||||||| |||| | |||||| | || || |||||||| || || ||
Sbjct 16544 CTCCTTCTGAATGTTGTAGTCGGATAGGGTTCGGCCATCCTCAAGCTGCTTGCCGGCGAA 16485
Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664
||||| ||||| ||||| | ||| | | ||||||||| |||||| ||| | ||
Sbjct 16484 AATCAATCGCTGTTGGTCGGGAGGGATACCCTCCTTGTCTTGGATCTTCGACTT-AACGT 16426
Query 35665 TG-CCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGT 35712
|| | | ||||| || |||||||| | ||||| || || || ||
Sbjct 16425 TGTCGATAGTGTCCGAAGACTCCACCTCGAGGGTGATGGTCTTTCCGGT 16377
Score = 82.4 bits (90), Expect = 7e-11
Identities = 135/192 (70%), Gaps = 2/192 (1%)
Strand=Plus/Minus
Query 35546 TCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAAT 35605
||||| || |||||||| ||| || || || | || || || ||||| || || ||
Sbjct 16252 TCCTTCTGGATGTTGTAGTCGCTCAGAGTGCGACCATCCTCAAGTTGCTTTCCAGCGAAA 16193
Query 35606 ATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTT 35665
||||| ||||||||||| | ||||| || ||||| ||| ||| || | || |||
Sbjct 16192 ATCAATCGCTGCTGGTCAGGAGGAATGCCTTCCTTATCC-TGAATCTTGGATTTGACGTT 16134
Query 35666 G-CCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724
| | | |||||| || |||||||| | ||||| || || || || | || || ||
Sbjct 16133 GTCGATGGTGTCGGAGGACTCCACCTCAAGGGTGATGGTCTTGCCAGTGAGGGTCTTGAC 16074
Query 35725 AAATATCTGCAT 35736
|| ||||||||
Sbjct 16073 GAAGATCTGCAT 16062
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 450782645715520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |