Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Daldinia_20eschscholtzii_20[genbank_20GCA_5F000751375.1_202014-09-
06] 1,944 sequences; 35,539,942 total letters
Query= NC_027923.1
Length=132831
Score E
Sequences producing significant alignments: (Bits) Value
seq1817 118 9e-22
seq274 104 2e-17
seq315 84.2 2e-11
>seq1817
Length=26529
Score = 118 bits (130), Expect = 9e-22
Identities = 145/198 (73%), Gaps = 0/198 (0%)
Strand=Plus/Minus
Query 27051 GTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCG 27110
||||| || || || || ||||||||||| | | || ||||||| ||||| |||||
Sbjct 16777 GTAGATTCCTTCTGGATGTTGTAGTCGCTGAGAGTTCGGCCGTCTTCCAGCTGCTTACCC 16718
Query 27111 GCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTTC 27170
|| | || || ||||||||||| || || | |||||| || || ||||||| | |||
Sbjct 16717 GCAAAGATAAGTCGCTGTTGATCGGGGGGAATACCCTCCTTGTCCTGGATCTTGCTCTTC 16658
Query 27171 AGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGTT 27230
| | || | ||||||| | ||||| |||| || || | ||||| |||| |||
Sbjct 16657 ACATTATCGATGGTGTCTGACGACTCAACCTCTAAGGTGATGGTCTTGCCGGTCAAAGTC 16598
Query 27231 TTCACAAAGATTTGCATA 27248
||||||||||| ||||||
Sbjct 16597 TTCACAAAGATCTGCATA 16580
Score = 84.2 bits (92), Expect = 2e-11
Identities = 144/209 (69%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 27039 ACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCG 27098
||||| || | ||| || || || || || ||||||||||| | |||| | || ||
Sbjct 17017 ACCAAGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCGCTTAGAGTGCGACCATCCTCC 16958
Query 27099 AGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCG 27158
| ||| ||||| ||| | || || || ||||| || || || | || || || || |
Sbjct 16957 AACTGCTTACCAGCGAAGATAAGTCGTTGTTGGTCAGGGGGAATGCCTTCCTTGTCCTGG 16898
Query 27159 ATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTG 27218
|||||| | || | | | || | ||||| | | |||||| || ||||| || | ||
Sbjct 16897 ATCTTGCTCTTGACGTTGTCAATCGTGTCCGATGATTCAACCTCCAGAGTGATCGTCTTT 16838
Query 27219 CCCGTCAGAGTTTTCACAAAGATTTGCAT 27247
|| |||| || || || ||||| |||||
Sbjct 16837 CCTGTCAAGGTCTTGACGAAGATCTGCAT 16809
>seq274
Length=11782
Score = 104 bits (114), Expect = 2e-17
Identities = 329/501 (66%), Gaps = 17/501 (3%)
Strand=Plus/Plus
Query 131603 GGACATTCGCTGGGACACATTAGCGACCACACGCCGTTCTGTTCAACTCGCTTCATAAAC 131662
|| || || || || ||||| || | |||| ||||||||| ||||| |||||||| ||
Sbjct 3046 GGGCACTCACTAGGGCACATGAGGGTCCACTCGCCGTTCTTCTCAACACGCTTCATGAAA 3105
Query 131663 AAATCCGGCACCCATAACGCGTACAACAGATCTCTAGCTTTTTTCTCTTCTGTACCCATA 131722
| || || | ||| | ||| || ||||| | ||| |||||| |||| ||
Sbjct 3106 AGGTCAGGAATCCAGAGAGCGAGGAAAAGATCGCGAGCACGGACTTCTTCTTTACC-ATG 3164
Query 131723 AtttttttCAAATTTAAA-AAGTCCAAAATGTCCGCATGCCAGGGTTCCAAATACACTGC 131781
|| || || | || || || || | ||| ||||||||||| | ||| | ||
Sbjct 3165 GTTCTTGCGAAGGTCAAGGAACTCGAAGACATCCTGGTGCCAGGGTTCGAGATATATAGC 3224
Query 131782 CATTGC-----GCCT-TTGCGCTTACCGCCTTGATTAACATGACGAACCATGTTGTTGTA 131835
| || |||| ||| ||||| || || | ||| | | | |||||||| |
Sbjct 3225 AAAGGCACCGGGCCTCTTG---TTACCACCCTGGTCAACGTATCTGGCGGTGTTGTTGAA 3281
Query 131836 TACGCGCAACATGGGCTCCAAACCGTTGGCGTTTCCATTGGTGCTCTTAATGTAGCTGCC 131895
|| |||||||||||| | | ||| || | | | ||||| || | ||||| |||
Sbjct 3282 AACTCGCAACATGGGCACGATACCATTAGAGGTACCATTCGTACCGGCGATGTATGAGCC 3341
Query 131896 ATTGGCTCTGATTTTGTGAACGTTGAGTCCAATACCTCC-GCCGTATTTAGAGATTAGTG 131954
| | || | ||| ||| | |||||| || |||||||| || || || ||||| | |
Sbjct 3342 AGTAGCACGGATCCGGTGGATGTTGAGACCGATACCTCCAGCTGT-CTTGGAGATCATGG 3400
Query 131955 CGCATTTGGTTAGAGTGTTATAGATACCTTCCACGCTGTCCGCGGCAATGTCGACTAAAA 132014
| || | | || |||| |||||||| || | ||||| | ||||| ||||| |
Sbjct 3401 CACAGGTCTTGAGTGTGTCGTAGATACCCTCAATACTGTCTTCCTTCATGTCAACTAAGA 3460
Query 132015 AGCAAGAGGACAACTGTTGGTGAAATGTGCCGGC--TGAAAACAATGTGGGGCTGGCGTG 132072
|||| |||| || |||| || ||| || || |||||| | |||||| |||||
Sbjct 3461 AGCAGGAGGCCAGCTGTGCCTGGGGTGTTCCAGCATTGAAAAGA--GTGGGGGAAGCGTG 3518
Query 132073 TGTAAAAAGTTTTTTGGCCAT 132093
|| ||| ||| ||| |||
Sbjct 3519 GGTGAAATATTTGCTGGACAT 3539
>seq315
Length=5603
Score = 84.2 bits (92), Expect = 2e-11
Identities = 132/189 (70%), Gaps = 0/189 (0%)
Strand=Plus/Plus
Query 27051 GTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCG 27110
||||| || || || || ||||||||| | | | || |||| |||||||| || |||
Sbjct 1105 GTAGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTTCGGCCGTCCTCGAGCTGCTTTCCG 1164
Query 27111 GCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTTC 27170
||| | || || |||||||| || || || | |||||| || || ||||||| ||
Sbjct 1165 GCGAAGATCAGGCGCTGTTGGTCGGGGGGGATACCCTCCTTGTCCTGGATCTTGGACTTG 1224
Query 27171 AGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGTT 27230
| | || | ||||| | | || || || || || || | ||||||||||| ||
Sbjct 1225 ACATTGTCGATGGTGTCGGAAGACTCCACCTCGAGGGTGATGGTCTTGCCCGTCAGGGTC 1284
Query 27231 TTCACAAAG 27239
||||| |||
Sbjct 1285 TTCACGAAG 1293
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 424924332241728
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |