Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Daldinia_20eschscholtzii_20[genbank_20GCA_5F000751375.1_202014-09-
06] 1,944 sequences; 35,539,942 total letters
Query= NC_028092.1
Length=193301
Score E
Sequences producing significant alignments: (Bits) Value
seq274 174 2e-38
seq1257 131 2e-25
>seq274
Length=11782
Score = 174 bits (192), Expect = 2e-38
Identities = 713/1110 (64%), Gaps = 23/1110 (2%)
Strand=Plus/Plus
Query 118527 TCCGCGAGACCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTCCGAGCG 118586
|| || ||||| || ||||| || || || || || || | ||| || || || ||
Sbjct 2584 TCTGCAAGACCCTGAACACCTAGACCGATAGGACGGTGGCGCATGTTGCTGTTGCGTGCT 2643
Query 118587 GTCTCCACGGGATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTT 118646
||||| || | || ||||||| || || || || | |||||| ||||
Sbjct 2644 TCGGGAACGGGGTAGTAGTTGACATCGATAGTTCTGTTCAGGTTGTGGGTGACGACCTGG 2703
Query 118647 GTGATTTCATGAAGCTTTTCGTAATCAAA---ACTGCGAGTCTCTTCATTGACATACTTA 118703
|| | ||| || ||||||| | | ||| | || | || | ||| || ||
Sbjct 2704 GTAACTTCGTGCAGCTTTTGGAAGTCATAGGTACCGTTGGTGTAGTCAACGAATGAC--- 2760
Query 118704 GGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATA 118763
|| || || | ||||||| || || || | |||||| | | | |||||| |||
Sbjct 2761 GGCAGCGCAAGAGACGCCAAGTTGCAGACGGCTACCTCATCGGGAGCCGAGTACTCGATA 2820
Query 118764 ATTTCCGTGCACAAGTTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTG 118823
|| || ||||||||||| ||||| ||| || || | |||||| ||||| ||| |
Sbjct 2821 ATCTCAGTGCACAAGTTAGAACTACGAATAGTTCCAAGGTTCTTCTGATTGCTCTTGCGG 2880
Query 118824 TTACACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATA 118883
|| || |||||||||||||||| | || |||| ||||| || || | || |||||
Sbjct 2881 TTGCAGTGATCCTTGTAAAGCATGAAGGGATTCCCGGTCTCGGTCTGAGCCTCCAGAATG 2940
Query 118884 GCCTTCCAGACAT--CGGCAGCTGGCACAGTGGCGTTGGCTCGCCCCTCTTCCTCGTACT 118941
|| | ||| | | || | | ||||| | || || ||| |||| ||||
Sbjct 2941 GCGTACCATAGTTTCTGGGCCTTAACCTTCTGGCG--ACCACGACCTTCTGCCTCATACT 2998
Query 118942 TTGTGTAGAGGGCTTCAAACTCTTCACCCACGGCCTCTGAGAGCCCTGGTGCCTTATCTG 119001
| ||| | ||||||||| || ||||| | | || | || || || || | |
Sbjct 2999 TCTCGTACAAGGCTTCAAATTCATCACCGTAGACATCGGCAAGACCCGGGCACTCACTAG 3058
Query 119002 GGCAGAAGAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCC 119061
|||| | ||| | ||| | || || |||||| ||||||||||| ||||| || ||||
Sbjct 3059 GGCACATGAGGGTCCACTCGCCGTTCTTCTCAACACGCTTCATGAAAAGGTCAGGAATCC 3118
Query 119062 AGAGCGCCGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACT 119121
|||| || ||| ||||| ||| || ||||||| | || || || || | |
Sbjct 3119 AGAGAGCGAGGAAAAGATCGCGAGCACGGACTTCTTCTTTACCATGGTTCTTGCGAAGGT 3178
Query 119122 CCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTG-ACC---CC 119177
| | || || | || |||| |||||| ||||| || || | || | | ||| ||
Sbjct 3179 CAAGGAACTCGAAGACATCCTGGTGCCAGGGTTCGAGATATATAGCAAAGGCACCGGGCC 3238
Query 119178 TTACGACGACCAGCCTGGTTTACATACCTCGCAGTGGCGTTAAATACACGAAGCATTGGA 119237
| | |||| |||||| || || || || ||| ||| || || || | ||| ||
Sbjct 3239 TCTTG-TTACCACCCTGGTCAACGTATCTGGCGGTGTTGTTGAAAACTCGCAACATGGGC 3297
Query 119238 ATGATACCATCGGATTGGCCATTTGT-CCCCCGA-ATACGAGACTTATTGGCTCTGACAT 119295
| |||||||| || ||||| || || ||| || ||| | | | || | ||
Sbjct 3298 ACGATACCATTAGAGGTACCATTCGTACCGGCGATGTATGAGCC--AGTAGCACGGATCC 3355
Query 119296 CGTGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGAC 119355
|||||||| | ||| ||||| || || ||| ||||| || || | ||||
Sbjct 3356 GGTGGATGTTGAGACCGATACCTCCAGCTGTCTTGGAGATCATGGCACAGGTCTTGAGTG 3415
Query 119356 TGCCGTAGATCCCATCGATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACATTT 119415
|| ||||||| || || || ||| |||| | | | | ||||||| | || |
Sbjct 3416 TGTCGTAGATACCCTCAATACTGTCTTCCTTCATGTCAACTAAGAAGCAGGAGGCCAGCT 3475
Query 119416 GAGGCCTGGGTGTACCAGCGTTGAAGAGAGTTGGTGTCGCGTGGATGAACATACCTTG-- 119473
| | | |||||| ||||| ||||| ||||| || | |||||| |||| ||| |||
Sbjct 3476 GTGCCTGGGGTGTTCCAGCATTGAAAAGAGTGGGGGAAGCGTGGGTGAA-ATA-TTTGCT 3533
Query 119474 GGACATCTTGTCGTAGGTCTCCAAGACGGCGGGAATGTCTTCCCCGTGAATACCGATCGA 119533
|||||| || ||| |||| | ||| | | || || |||||| | |
Sbjct 3534 GGACATAAGGTTGTAAGTCTGAATGACTTTCTCTACATTATCGCCCCAAATACCAACAGC 3593
Query 119534 GACCCGCATAAACATGTATTGGGGTGTTTCCATCAGGATACCATCGAGCCTCTGGAGGTA 119593
|| ||||| | ||||| || || |||| | | | ||| |||| || | |||||
Sbjct 3594 CACACGCATGATCATGTGCTGTGGCCTTTCTACAATCTTCTCATTGAGCTTCAGTAGGTA 3653
Query 119594 ACTCTTCTCCAAGGTCTTGAGACCAAAATA 119623
| | ||||||||||||||| ||||| ||
Sbjct 3654 AGACCTCTCCAAGGTCTTGAAGCCAAAGTA 3683
>seq1257
Length=2089
Score = 131 bits (144), Expect = 2e-25
Identities = 117/147 (80%), Gaps = 0/147 (0%)
Strand=Plus/Minus
Query 130027 GTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAGACC 130086
||| |||||||||||||| |||||||| || || |||||| ||||| ||||| |||||
Sbjct 636 GTGCAGACCCTCGTCACGAGAGATGAGCTCGTTGGAGAAGGTAAGACCGGGCATCAGACC 577
Query 130087 CCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCACACA 130146
|||||||||||||||||||| | |||| |||| ||||||||| ||||| |||
Sbjct 576 ACGCTTCTTCAACCAGAAAATGGAGGCGAATGCGCCACTGAAGAAGATACCCTCGACAGC 517
Query 130147 CGCGAACGCAAAGAGACGCTCAGCAAA 130173
|| || |||| ||||||| ||||||
Sbjct 516 AGCAAAGGCAATAAGACGCTGAGCAAA 490
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 618420172024640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |