Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Daldinia_20eschscholtzii_20[genbank_20GCA_5F000751375.1_202014-09- 06] 1,944 sequences; 35,539,942 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq274 174 2e-38 seq1257 131 2e-25 >seq274 Length=11782 Score = 174 bits (192), Expect = 2e-38 Identities = 713/1110 (64%), Gaps = 23/1110 (2%) Strand=Plus/Plus Query 118527 TCCGCGAGACCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTCCGAGCG 118586 || || ||||| || ||||| || || || || || || | ||| || || || || Sbjct 2584 TCTGCAAGACCCTGAACACCTAGACCGATAGGACGGTGGCGCATGTTGCTGTTGCGTGCT 2643 Query 118587 GTCTCCACGGGATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTT 118646 ||||| || | || ||||||| || || || || | |||||| |||| Sbjct 2644 TCGGGAACGGGGTAGTAGTTGACATCGATAGTTCTGTTCAGGTTGTGGGTGACGACCTGG 2703 Query 118647 GTGATTTCATGAAGCTTTTCGTAATCAAA---ACTGCGAGTCTCTTCATTGACATACTTA 118703 || | ||| || ||||||| | | ||| | || | || | ||| || || Sbjct 2704 GTAACTTCGTGCAGCTTTTGGAAGTCATAGGTACCGTTGGTGTAGTCAACGAATGAC--- 2760 Query 118704 GGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATA 118763 || || || | ||||||| || || || | |||||| | | | |||||| ||| Sbjct 2761 GGCAGCGCAAGAGACGCCAAGTTGCAGACGGCTACCTCATCGGGAGCCGAGTACTCGATA 2820 Query 118764 ATTTCCGTGCACAAGTTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTG 118823 || || ||||||||||| ||||| ||| || || | |||||| ||||| ||| | Sbjct 2821 ATCTCAGTGCACAAGTTAGAACTACGAATAGTTCCAAGGTTCTTCTGATTGCTCTTGCGG 2880 Query 118824 TTACACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATA 118883 || || |||||||||||||||| | || |||| ||||| || || | || ||||| Sbjct 2881 TTGCAGTGATCCTTGTAAAGCATGAAGGGATTCCCGGTCTCGGTCTGAGCCTCCAGAATG 2940 Query 118884 GCCTTCCAGACAT--CGGCAGCTGGCACAGTGGCGTTGGCTCGCCCCTCTTCCTCGTACT 118941 || | ||| | | || | | ||||| | || || ||| |||| |||| Sbjct 2941 GCGTACCATAGTTTCTGGGCCTTAACCTTCTGGCG--ACCACGACCTTCTGCCTCATACT 2998 Query 118942 TTGTGTAGAGGGCTTCAAACTCTTCACCCACGGCCTCTGAGAGCCCTGGTGCCTTATCTG 119001 | ||| | ||||||||| || ||||| | | || | || || || || | | Sbjct 2999 TCTCGTACAAGGCTTCAAATTCATCACCGTAGACATCGGCAAGACCCGGGCACTCACTAG 3058 Query 119002 GGCAGAAGAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCC 119061 |||| | ||| | ||| | || || |||||| ||||||||||| ||||| || |||| Sbjct 3059 GGCACATGAGGGTCCACTCGCCGTTCTTCTCAACACGCTTCATGAAAAGGTCAGGAATCC 3118 Query 119062 AGAGCGCCGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACT 119121 |||| || ||| ||||| ||| || ||||||| | || || || || | | Sbjct 3119 AGAGAGCGAGGAAAAGATCGCGAGCACGGACTTCTTCTTTACCATGGTTCTTGCGAAGGT 3178 Query 119122 CCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTG-ACC---CC 119177 | | || || | || |||| |||||| ||||| || || | || | | ||| || Sbjct 3179 CAAGGAACTCGAAGACATCCTGGTGCCAGGGTTCGAGATATATAGCAAAGGCACCGGGCC 3238 Query 119178 TTACGACGACCAGCCTGGTTTACATACCTCGCAGTGGCGTTAAATACACGAAGCATTGGA 119237 | | |||| |||||| || || || || ||| ||| || || || | ||| || Sbjct 3239 TCTTG-TTACCACCCTGGTCAACGTATCTGGCGGTGTTGTTGAAAACTCGCAACATGGGC 3297 Query 119238 ATGATACCATCGGATTGGCCATTTGT-CCCCCGA-ATACGAGACTTATTGGCTCTGACAT 119295 | |||||||| || ||||| || || ||| || ||| | | | || | || Sbjct 3298 ACGATACCATTAGAGGTACCATTCGTACCGGCGATGTATGAGCC--AGTAGCACGGATCC 3355 Query 119296 CGTGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGAC 119355 |||||||| | ||| ||||| || || ||| ||||| || || | |||| Sbjct 3356 GGTGGATGTTGAGACCGATACCTCCAGCTGTCTTGGAGATCATGGCACAGGTCTTGAGTG 3415 Query 119356 TGCCGTAGATCCCATCGATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACATTT 119415 || ||||||| || || || ||| |||| | | | | ||||||| | || | Sbjct 3416 TGTCGTAGATACCCTCAATACTGTCTTCCTTCATGTCAACTAAGAAGCAGGAGGCCAGCT 3475 Query 119416 GAGGCCTGGGTGTACCAGCGTTGAAGAGAGTTGGTGTCGCGTGGATGAACATACCTTG-- 119473 | | | |||||| ||||| ||||| ||||| || | |||||| |||| ||| ||| Sbjct 3476 GTGCCTGGGGTGTTCCAGCATTGAAAAGAGTGGGGGAAGCGTGGGTGAA-ATA-TTTGCT 3533 Query 119474 GGACATCTTGTCGTAGGTCTCCAAGACGGCGGGAATGTCTTCCCCGTGAATACCGATCGA 119533 |||||| || ||| |||| | ||| | | || || |||||| | | Sbjct 3534 GGACATAAGGTTGTAAGTCTGAATGACTTTCTCTACATTATCGCCCCAAATACCAACAGC 3593 Query 119534 GACCCGCATAAACATGTATTGGGGTGTTTCCATCAGGATACCATCGAGCCTCTGGAGGTA 119593 || ||||| | ||||| || || |||| | | | ||| |||| || | ||||| Sbjct 3594 CACACGCATGATCATGTGCTGTGGCCTTTCTACAATCTTCTCATTGAGCTTCAGTAGGTA 3653 Query 119594 ACTCTTCTCCAAGGTCTTGAGACCAAAATA 119623 | | ||||||||||||||| ||||| || Sbjct 3654 AGACCTCTCCAAGGTCTTGAAGCCAAAGTA 3683 >seq1257 Length=2089 Score = 131 bits (144), Expect = 2e-25 Identities = 117/147 (80%), Gaps = 0/147 (0%) Strand=Plus/Minus Query 130027 GTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAGACC 130086 ||| |||||||||||||| |||||||| || || |||||| ||||| ||||| ||||| Sbjct 636 GTGCAGACCCTCGTCACGAGAGATGAGCTCGTTGGAGAAGGTAAGACCGGGCATCAGACC 577 Query 130087 CCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCACACA 130146 |||||||||||||||||||| | |||| |||| ||||||||| ||||| ||| Sbjct 576 ACGCTTCTTCAACCAGAAAATGGAGGCGAATGCGCCACTGAAGAAGATACCCTCGACAGC 517 Query 130147 CGCGAACGCAAAGAGACGCTCAGCAAA 130173 || || |||| ||||||| |||||| Sbjct 516 AGCAAAGGCAATAAGACGCTGAGCAAA 490 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618420172024640