Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Daldinia_20eschscholtzii_20[genbank_20GCA_5F000751375.1_202014-09- 06] 1,944 sequences; 35,539,942 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq274 190 2e-43 seq1257 131 2e-25 >seq274 Length=11782 Score = 190 bits (210), Expect = 2e-43 Identities = 898/1398 (64%), Gaps = 29/1398 (2%) Strand=Plus/Minus Query 104216 GAAACCCCACAGTACATGTTCATGCGCGTGGCCATCGGTATTCATGGGGAAGACATTGAT 104275 |||| |||||| ||||| ||||||| ||||| | |||||| || || | | || Sbjct 3623 GAAAGGCCACAGCACATGATCATGCGTGTGGCTGTTGGTATTTGGGGCGATAATGTAGAG 3564 Query 104276 TCTGTCTTGGAGACATACGACAAGATGTCC--CAAGGTATGTTCATTCACGCAACACCAA 104333 ||| | |||| ||| || |||||| ||| ||| |||| ||||| | || | Sbjct 3563 AAAGTCATTCAGACTTACAACCTTATGTCCAGCAAA-TAT-TTCACCCACGCTTCCCCCA 3506 Query 104334 CCCTCTTCAATGCTGGTACACCAAGACCCCAAATGTCCAGTTGCTTCCTTATCGCCAACA 104393 | || ||||||||||| ||||| | || || || |||||| | | | || | Sbjct 3505 CTCTTTTCAATGCTGGAACACCCCAGGCACAGCTGGCCTCCTGCTTCTTAGTTGACATGA 3446 Query 104394 AGGAGGACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGT 104453 |||| ||| || | |||||||| | || || | | ||||| ||||| ||| Sbjct 3445 AGGAAGACAGTATTGAGGGTATCTACGACACACTCAAGACCTGTGCCATGATCTCCAAGA 3386 Query 104454 GGGCTGGGGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTAT-TCGG 104512 ||||| ||||| || | ||||||| | | || | | ||| || ||| Sbjct 3385 CAGCTGGAGGTATCGGTCTCAACATCCACCGGATCCGTGCTACTGG--CTCATACATCGC 3328 Query 104513 GGG-ACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGC 104571 || || |||||| || ||||||| | || ||| | || || || ||| ||| || Sbjct 3327 CGGTACGAATGGTACCTCTAATGGTATCGTGCCCATGTTGCGAGTTTTCAACAACACCGC 3268 Query 104572 GCGCTATGTAAATCAAGCTGGGCGTCGAAAGG----GATCTATCGCAGTCTATCTTGAGC 104627 | || || | || | ||| | | ||| | | | || | ||||| || | Sbjct 3267 CAGATACGTTGACCAGGGTGGTAA-CAAGAGGCCCGGTGCCTTTGCTATATATCTCGAAC 3209 Query 104628 CATGGCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGACGAGGAGG 104687 | |||||| |||| || | ||||||||||| | || ||||| ||| | || || | Sbjct 3208 CCTGGCACCAGGATGTCTTCGAGTTCCTTGACCTTCGCAAGAACCATGGTAAAGAAGAAG 3149 Query 104688 CGCGGTGC-CGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTT 104746 || ||| |||||||| ||| ||||||||||||||| || || ||||||||| | ||| Sbjct 3148 TCCG-TGCTCGCGATCTTTTCCTCGCTCTCTGGATTCCTGACCTTTTCATGAAGCGTGTT 3090 Query 104747 GAGGAGAGTGGCAATTGGTCTCTCTTTTGTCC-AGACAAGGCACCTGGTCTCTCCGATGC 104805 ||| ||| ||| | ||| | ||| | || || || | || || ||||| |||||| Sbjct 3089 GAGAAGAACGGCGAGTGGACCCTCATGTGCCCTAGTGAGTGC-CCGGGTCTTGCCGATGT 3031 Query 104806 CGTGGGTGAGGAGTTTGAAGCCCTTTACACAAAGTACGAGGAAGAAGGTCGGGCGACTGC 104865 | ||||| || ||||||||| | ||| ||||| |||| ||||||||| | | | | Sbjct 3030 CTACGGTGATGAATTTGAAGCCTTGTACGAGAAGTATGAGGCAGAAGGTCGTG-GTCGCC 2972 Query 104866 -GACGGTGCCAGCTGCCGATGTGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTA 104924 || ||| || | | ||| | || ||||| || |||| |||||||| || | Sbjct 2971 AGAAGGTTAAGGCCCAGAAACTATGGTACGCCATTCTGGAGGCTCAGACCGAGACCGGGA 2912 Query 104925 CACCATACATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTG 104984 || | |||||||||||| || ||| |||| ||||| ||||| ||||| | || Sbjct 2911 ATCCCTTCATGCTTTACAAGGATCACTGCAACCGCAAGAGCAATCAGAAGAACCTTGGAA 2852 Query 104985 TGATCAAGAGTTCCAATCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGG 105044 || ||||| || | || || || || | || | | | |||||| | Sbjct 2851 CTATTCGTAGTTCTAACTTGTGCACTGAGATTATCGAGTACTCGGCTCCCGATGAGGTAG 2792 Query 105045 CTGTGTGTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAGACAAAG--AC 105102 | || || ||| | || || | || || || | || || | | | ||| | || Sbjct 2791 CCGTCTGCAACTTGGCGTCTCTTGCGCTGCCGTCATTCGTTGA-CTACA-CCAACGGTAC 2734 Query 105103 ATTTGATTATGAAAAACTCCACGAAGTTACGAAAACTGTCACCAAAAACCTAAACAGAGT 105162 | ||| | |||| || ||||||||||| | |||||| | ||||| |||||| Sbjct 2733 CTATGACTTCCAAAAGCTGCACGAAGTTACCCAGGTCGTCACCCACAACCTGAACAGAAC 2674 Query 105163 TATTGATAGAAATTTTTACCCCGTTGAGACTGCTCGTAAATCTAATATGAGACACCGTCC 105222 ||| ||| || | ||||||||| || || || || ||| | |||||||| Sbjct 2673 TATCGATGTCAACTACTACCCCGTTCCCGAAGCACGCAACAGCAACATGCGCCACCGTCC 2614 Query 105223 AATTGGTCTCGGTGTTCAGGGTCTCGCGGATGTATTCAT-TCTTTGTCGCCACGCATTTG 105281 || ||||| |||||||||||||| || || ||| | | || || |||| | Sbjct 2613 TATCGGTCTAGGTGTTCAGGGTCTTGCAGACACCTTCCTAGCACTG-CGTATGCCATTCG 2555 Query 105282 ATTCCGACGAAGCGAAGGAAATCAATGCGCGCATATTTGAGACCATGTATCACGCCGCTC 105341 | || || || | | | || || || || ||||| || || || || |||| Sbjct 2554 AGTCTCCGGAGGCCAGACAGTTGAACAAGCAGATCTTCGAGACTATTTACCATGCTGCTC 2495 Query 105342 TTGAGGCGAGTTCAGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTCTC 105401 | || ||| | || |||| || ||| | || || | || ||||||| Sbjct 2494 TAACTGCCTCCGTGGAGATCGCCAAGGTCGAGGGTACCTACTCGACTTACGAAGGTTCTC 2435 Query 105402 CAGCTTCACAAGGGGTGCTTCAATTTGATATGTGGGAAGGTGAGACCAAG-CTTCACTAC 105460 | | ||| || || | || |||| || |||| |||| || | || || || || Sbjct 2434 CTGTTTCTCAGGGTATCCTACAATACGACATGT-GGAATGTCACCCCCAGTGATCTCTGG 2376 Query 105461 GACTGGG-AAGCTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTCCTCAT 105519 || |||| ||| || ||||| | |||||| | | ||| | || ||||| | | | Sbjct 2375 GATTGGGCTAGC-CTTAAGGAGCAAATCAAGCAACATGGTGTACGAAACAGCTTGTTAGT 2317 Query 105520 GGCTCCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACC 105579 ||||| ||||| || || ||| | || || ||||||| || |||||||| || || Sbjct 2316 TGCTCCTATGCCCACTGCTAGCACTTCCCAGATTCTGGGTAACAACGAATGCTTCGAGCC 2257 Query 105580 CTACACGACGAACATCTA 105597 |||||| ||||||| || Sbjct 2256 CTACACATCGAACATTTA 2239 >seq1257 Length=2089 Score = 131 bits (144), Expect = 2e-25 Identities = 158/214 (74%), Gaps = 6/214 (3%) Strand=Plus/Plus Query 94734 AGTTCCGTGTATTCAAAAGAAAGCGGATTGGGCTATGAAGTGGTT---TGATACAAAGTC 94790 |||||| || |||| ||||| || || |||||| || | ||| | ||| | || || Sbjct 426 AGTTCCCTGCATTCGCAAGAAGGCCGACTGGGCTCTGCAATGGATCTCTGACAAGAACTC 485 Query 94791 GCGTTCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGG 94850 || ||||| |||| || | || ||||| ||| ||||||||||||||| ||| Sbjct 486 CACTT---TTGCTCAGCGTCTTATTGCCTTTGCTGCTGTCGAGGGTATCTTCTTCAGTGG 542 Query 94851 TTCCTTCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTC 94910 | ||| | | |||| ||| | |||||||| ||||| ||||| ||||| |||||| Sbjct 543 CGCATTCGCCTCCATTTTCTGGTTGAAGAAGCGTGGTCTGATGCCCGGTCTTACCTTCTC 602 Query 94911 CAACGAGCTTATCTCTCGTGACGAGGGACTCCAC 94944 ||||||||| ||||||||||||||||| || ||| Sbjct 603 CAACGAGCTCATCTCTCGTGACGAGGGTCTGCAC 636 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583246626762560