Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Daldinia_20eschscholtzii_20[genbank_20GCA_5F000751375.1_202014-09- 06] 1,944 sequences; 35,539,942 total letters Query= NC_028094.1 Length=473558 Score E Sequences producing significant alignments: (Bits) Value seq1592 277 5e-69 seq862 140 1e-27 seq1817 127 6e-24 seq600 109 2e-18 seq863 93.3 1e-13 >seq1592 Length=100478 Score = 277 bits (306), Expect = 5e-69 Identities = 948/1472 (64%), Gaps = 8/1472 (1%) Strand=Plus/Plus Query 349197 CCGCTATAGGAATCGATTTAGGTACTACTTATTCTTGTGTTGCTGTTTGGCAAAATGATC 349256 |||| | ||||| || || || || || || |||||||| | || | | | |||| | Sbjct 66438 CCGCAGTCGGAATTGACTTGGGCACGACCTACTCTTGTGTAGGCGTCTACCGAGATGACC 66497 Query 349257 GTGTAGAAATAATTGCAAATGATCAAGGTAACAGAACAACGCCATCATACGTTGCATTTA 349316 | | ||||| ||||| ||||| || |||||| |||| || || || | ||| || || | Sbjct 66498 GAATTGAAATCATTGCCAATGACCAGGGTAACCGAACCACACCCTCCTTCGTGGCCTTCA 66557 Query 349317 CCGAAACTGAGCGTATGATTGGTGATTCTGCAAAAAATCAAGCTGCTGCTAATCCAAAAA 349376 | || || |||||| | ||||||||| | ||||| || || | ||| || || | | Sbjct 66558 CGGACACGGAGCGTCTAATTGGTGATGCCGCAAAGAACCAGGTCGCTATGAACCCTCAGA 66617 Query 349377 ATACGGTTTTTGATGCTAAGCGACTTATTGGTAGAAGTTTTTCTGACAAATCTACACAAT 349436 | || || || || |||||||| || |||||| | | || || ||| || Sbjct 66618 ACACCGTCTTCGACGCTAAGCGTCTGATTGGTCGCAAGTTCTCAGACCCTGAGGTTCAGG 66677 Query 349437 CTGATCTAAAACATTTTCCTTTTACTGTTGTTCCAAAAGACGGTGATAAACCAATTATTG 349496 | ||| | || || || || || | || || | |||| || || || ||| ||| Sbjct 66678 CCGATATGAAGCACTTCCCCTTCAAGGTCATTG-ACAAGAA--TGGCAAGCCTATTGTTG 66734 Query 349497 AGGTTGAATATAAAGGTGAACAAAAACAATTTTTACCCGAAGAAATTTCATCAATGGTTT 349556 |||| || || || ||||| || || || ||||||||||| || || ||||| Sbjct 66735 AGGTCGAGTACAAGGGTGAGACCAAGCAGTTCACCCCCGAAGAAATCTCCTCTATGGTCC 66794 Query 349557 TAGTTAAAATGAAGGAAATTGCTGAAGCATATTTAGGTGAAACAGTAACTGATGCTGTTA 349616 | || ||| || | ||||| | || | |||| || || | | ||||| | Sbjct 66795 TCACCAAGATGCGTGAGACCGCTGAGTCCTACCTTGGTGGCACCGTCAACAACGCTGTCA 66854 Query 349617 TTACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCTGGCAGCA 349676 | |||||||| ||||| || || || | |||||| || || || || || || || Sbjct 66855 TCACTGTACCTGCCTACTTCAACGACTCTCAGCGTCAAGCTACCAAGGACGCCGGTCTCA 66914 Query 349677 TTGCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAATTGCATATG 349736 |||| || |||| || || |||| || || || ||||| || || || || || || | Sbjct 66915 TTGCTGGCCTAAACGTCCTCCGAATCATCAACGAGCCCACAGCCGCTGCCATCGCCTACG 66974 Query 349737 GGCTTGATAAAATGAGTGACCAAGaaaaaaaTATTCTTATTTTTGATTTAGGTGGTGGTA 349796 | ||||| || | | || || || |||| || || ||| | |||||||||| Sbjct 66975 GTCTTGACAAGAAGGCCGAGGGTGAGCGCAACGTTCTCATCTTCGATCTTGGTGGTGGTA 67034 Query 349797 CTTTTGATGTATCACTACTAACACTTGAAGAGGGAATTTTTGAAGTTAAAGCAACTGCTG 349856 | || ||||| || || ||||| |||| ||||| || || || ||||| | ||||||| Sbjct 67035 CCTTCGATGTGTCTCTCCTAACCATTGAGGAGGGTATCTTCGAGGTTAAGTCTACTGCTG 67094 Query 349857 GTGATACACATCTTGGTGGAGAAGATTTTGATAATCGTCTCGTTTCGCATTTTGTTAAAG 349916 |||| || || | ||||| ||||| || || || ||||| || || || || || | Sbjct 67095 GTGACACTCACTTGGGTGGTGAAGACTTCGACAACCGTCTAGTCAACCACTTCGTGAACG 67154 Query 349917 AATTTAAGCGTCAAGC-TAAAATTGATATTGGAGATAATCCTAGAGCAATGCGTCGCCTA 349975 | || ||||| ||||| || | ||| | || | | || |||| || || Sbjct 67155 AGTTCAAGCG-CAAGCACAAGAAGGATCTATCTACCAACGCCCGTGCTCTGCGACGTCTC 67213 Query 349976 AGAACTGCGTGTGAACGTGCTAAGCGTTCCTTATCATCTACTACCCAAACCTCTATTGAA 350035 |||| || || || ||||| ||||| | | || ||| || | || ||||| ||||| Sbjct 67214 CGAACCGCTTGCGAGCGTGCCAAGCGCACTCTTTCCTCTTCTGCTCAGACCTCCATTGAG 67273 Query 350036 ATTGATTCTCTTGCTGATGGCAAAGATTTCTTTTCATCTATTACACGTGCTCGGTTTGAA 350095 || || ||||| || || | || |||| | || || || ||||| || || || Sbjct 67274 ATCGACTCTCTATTCGAGGGTATTGACTTCTACACCTCCATCACCCGTGCCCGATTCGAG 67333 Query 350096 GAATTATGTATGGATCTTTTTAGAGCAACAATGGATCCTGTGGAAAAAGTATTAAAAGAT 350155 || | || |||||| || || | || || | || || || || | || Sbjct 67334 GAGCTTTGCCAGGATCTCTTCCGATCCACCATCCAGCCCGTCGACCGTGTCCTTGCCGAC 67393 Query 350156 GCAAAAATGTCCAAAAATCAGATTGATGAAGTAGTTTTAGTTGGTGGTTCTACACGTATT 350215 || || || ||| ||| | | || | || || || |||||||| || ||||| Sbjct 67394 GCCAAGATTGACAAGTCTCAAGTCCACGAGATTGTCTTGGTCGGTGGTTCCACTCGTATC 67453 Query 350216 CCAAAAGTTCAACAGTTACTATCTGAGTTTTTTAATGGCAAAGAACCTTCTAGATCAATT 350275 || ||||| || | | | || | || || ||||| || || | ||| || Sbjct 67454 CCCCGTGTTCAGAAGCTCATCACCGACTACTTCAACGGCAAGGAGCCCAACAAATCCATC 67513 Query 350276 AATCCAGATGAAGCTGTTGCATATGGTGCTGCTGTTCAGGCATCTATTTTATCTGGAAAT 350335 || || ||||| |||||||| || ||||| || || ||||| |||| | ||||| | Sbjct 67514 AACCCCGATGAGGCTGTTGCCTACGGTGCCGCCGTCCAGGCTGCTATCCTCTCTGGTGAC 67573 Query 350336 AAGAGTTCTAA---AATTGATGATCTATTACTACTAGATGTAACTCCACTTTCGCTTGGA 350392 | || || || | | || | | || || || || | || || || | || Sbjct 67574 ACCAGCTCCAAGTCGACCAACGAGATCCTGCTTCTCGACGTCGCCCCGCTATCCATCGGT 67633 Query 350393 TTAGAAACTTCTGGTGAAGTAATGACTGTTCTTATTCCTAGAAATAGTACTGTACCTACA 350452 | || ||| |||||| | ||||| || || || |||| | ||| | || || Sbjct 67634 ATCGAGACTGCTGGTGGTATGATGACCAAGCTCATCCCCCGAAACACCACTATTCCCACC 67693 Query 350453 AAAAAGTCCCAAACTTTTTCTACATTTGCAGATAATCAGCCAGCGGTAACAATTCAAGTA 350512 || |||||| | || || || || | || || ||||| | || || ||||| Sbjct 67694 AAGAAGTCCGAGGTCTTCTCCACCTTCTCGGACAACCAGCCCGGTGTGCTTATCCAAGTC 67753 Query 350513 TTTGAAGGTGAACGTGCTCGCACTAAAGATAATAATAAACTTGGAGAATTTACCCTAAGT 350572 | || ||||| ||| |||||||| || || || || || | || || | Sbjct 67754 TACGAGGGTGAGCGTCAACGCACTAAGGACAACAACCTGCTCGGCAAGTTCGAGCTGACC 67813 Query 350573 GAAATTCCACCAATGCCTAGAGGAGTTCCTCAGATTGAAGTCTCTTTCGATATTGATTCA 350632 | || ||||| |||| | || || ||||| ||||| ||| |||||||| | ||| | Sbjct 67814 GGTATCCCACCTGCGCCTCGTGGTGTCCCTCAAATTGAGGTCACTTTCGATGTCGATGCC 67873 Query 350633 AATGGTATTTTAAATGTTACCGCAGTTGaaaa 350664 || ||||| | || || | || ||||| || Sbjct 67874 AACGGTATCATCAACGTCTCTGCCGTTGAGAA 67905 >seq862 Length=2948 Score = 140 bits (154), Expect = 1e-27 Identities = 335/497 (67%), Gaps = 15/497 (3%) Strand=Plus/Minus Query 349610 GCTGTTATTACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCT 349669 |||||| ||||||| || || || || || || ||| ||| || || || ||||| Sbjct 1857 GCTGTTGTTACTGTTCCTGCTTACTTCAACGACAACCAACGTCAGGCTACCAAGGATGCA 1798 Query 349670 GGCAGCATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAATT 349729 || |||| |||| | || || || | || || || ||||||||||| || || || Sbjct 1797 GGTTCCATTTCGGGACTGAACGTGCTCCGTATCATCAACGAACCCACTGCCGCTGCTATC 1738 Query 349730 GCATATGGGCTTGAT---AAAATGAGTGACCAAGaaaaaaaTATTCTTATTTTTGATTTA 349786 ||||| || || | | || | || | ||| ||| | ||||| | |||| | Sbjct 1737 GCATACGGTCTGGGTTCCAACAAATCCAACAAGGAACGTAATGTCCTTATCTATGATCTT 1678 Query 349787 GGTGGTGGTACTTTTGATGTATCACTAC-TAACACTTGAAGAGGGAATTTTTGAAGTTAA 349845 |||||||||||||| ||||| || || | ||||| | | | || |||| || || Sbjct 1677 GGTGGTGGTACTTTCGATGTGTCTCTTCTTAACA-TCCAGGGTGGTGTTTTCACCGTCAA 1619 Query 349846 AGCAACTGCTGGTGATACACATCTTGGTGGAGAAGATTTTGATAATCGTCTCGTTTCGCA 349905 || |||||||||||||| |||||||||||| | ||||| |||| ||| || || Sbjct 1618 GGCTACTGCTGGTGATACCCATCTTGGTGGACAGGATTTCGATACCAACCTCCTTGACCA 1559 Query 349906 TTTTGTTAAAGAATTTAAGCGTCAAG-CTAAAATTGATATTGGAGATAATCCTAGAGCAA 349964 | | || || || |||| |||| | || | || || | | | || |||| Sbjct 1558 CTGTAAGAAGGAGTTCCAGCG-CAAGACCAAGAAGGACATCTCTGGTGACCCGCGAGCTC 1500 Query 349965 TGCGTCGCCTAAGAACTGCGTGTGAACGTGCTAAGCGTTCCTTATCATCTAC--TACCCA 350022 | || | || | ||||| || || ||||||||||| || | || | || | |||| Sbjct 1499 TCCGAAGACTTCGGACTGCTTGCGAGCGTGCTAAGCGAACCCTGTC--CAACGGTGCCCA 1442 Query 350023 AACCTCTATTGAAATTGATTCTCTTGCTGATGGCAAAGATTTCTT--TTCATCTATTACA 350080 |||| | ||||||||||| || ||| |||||| | |||||||| | || || || Sbjct 1441 AACCACCATTGAAATTGACTCGCTTTTCGATGGCGAGGATTTCTTCCTCCA--GATCACC 1384 Query 350081 CGTGCTCGGTTTGAAGA 350097 |||||||| || || || Sbjct 1383 CGTGCTCGTTTCGAGGA 1367 >seq1817 Length=26529 Score = 127 bits (140), Expect = 6e-24 Identities = 169/235 (72%), Gaps = 0/235 (0%) Strand=Plus/Minus Query 140503 TTTACATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTAT 140562 ||| ||| |||||||||| | || || || || || || || || || || || || | Sbjct 16296 TTTGCATGCCACCACGTAGACGAAGGACGAGGTGGAGGGTGGATTCCTTCTGGATGTTGT 16237 Query 140563 AATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGAT 140622 | || | || || ||||| |||||||| |||||||| || || | || ||||| | Sbjct 16236 AGTCGCTCAGAGTGCGACCATCCTCAAGTTGCTTTCCAGCGAAAATCAATCGCTGCTGGT 16177 Query 140623 CAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATG 140682 |||||||||| ||||| ||||||||||| || | ||| || || || || | || || | Sbjct 16176 CAGGAGGAATGCCTTCCTTATCCTGAATCTTGGATTTGACGTTGTCGATGGTGTCGGAGG 16117 Query 140683 GTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 || || ||||| || | ||||| || || || || || || || |||||||| Sbjct 16116 ACTCCACCTCAAGGGTGATGGTCTTGCCAGTGAGGGTCTTGACGAAGATCTGCAT 16062 Score = 111 bits (122), Expect = 5e-19 Identities = 156/219 (71%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566 |||||||||||| | | || |||||||| ||||||||||| || ||||| || || || Sbjct 16583 CATACCACCACGGAGACGGAGGACAAGATGGAGAGTAGACTCCTTCTGAATGTTGTAGTC 16524 Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626 |||| ||||| ||||| ||||| || || || || || || | || || || || || Sbjct 16523 GGATAGGGTTCGGCCATCCTCAAGCTGCTTGCCGGCGAAAATCAATCGCTGTTGGTCGGG 16464 Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTC 140686 ||| || || || || || || || || | || || || || || | || || | || Sbjct 16463 AGGGATACCCTCCTTGTCTTGGATCTTCGACTTAACGTTGTCGATAGTGTCCGAAGACTC 16404 Query 140687 AACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTAC 140725 || || || || | ||||||||||| || || || || Sbjct 16403 CACCTCGAGGGTGATGGTCTTTCCGGTAAGGGTCTTGAC 16365 >seq600 Length=9993 Score = 109 bits (120), Expect = 2e-18 Identities = 161/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 140510 ACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGA 140569 ||||||||||| | || ||||| || || || ||| || || || || || || || Sbjct 613 ACCACCACGTAGGCGGAGCACAAGGTGGAGGGTGCTCTCCTTCTGGATGTTGTAGTCGGA 672 Query 140570 TAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGG 140629 | ||||| |||||||| || || || || || ||||||| || || || || || || Sbjct 673 GAGGGTTCGACCATCTTCGAGCTGCTTGCCCGCGAAGATTAATCGCTGTTGGTCGGGGGG 732 Query 140630 AATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCAAC 140689 ||||| || || |||||||| || | || |||||||| || | || | || || Sbjct 733 GATTCCCTCCTTGTCCTGAATCTTCGACTTGACATTATCGATGGTGTCGCTAGACTCCAC 792 Query 140690 TTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 ||||| || | ||||| || || || || || || ||||||||||| Sbjct 793 CTCAAGGGTGATAGTCTTACCCGTGAGGGTCTTGACGAAAATCTGCAT 840 >seq863 Length=70956 Score = 93.3 bits (102), Expect = 1e-13 Identities = 111/150 (74%), Gaps = 3/150 (2%) Strand=Plus/Plus Query 377446 ATTTCTTCAATGCGTGGCACACCACGTGTAACATTCGATTTAGATGCAACACCAGCAAAG 377505 ||||| | || || |||||||| | || || ||| || || | | ||| | |||| Sbjct 47521 ATTTCCTTAAGACGAGGCACACCGAGAGTGACGTTC---TTTGACGAGATACCTGTAAAG 47577 Query 377506 TGGAAAGTATTAAGAGTTAATTGAGTAGTGGGCTCACCAATTGACTGCGCTGCAATAACG 377565 ||||| ||||| ||||| | || || | |||||||||||| || ||||| || | || Sbjct 47578 TGGAAGGTATTCAGAGTCATCTGCGTTGCGGGCTCACCAATCGATTGCGCAGCTAATACA 47637 Query 377566 CCAACCATTTCTCCAGGATTGACAATAGCC 377595 |||||||| || ||||||||||| || ||| Sbjct 47638 CCAACCATCTCGCCAGGATTGACCATTGCC 47667 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1515216658801032