Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Daldinia_20eschscholtzii_20[genbank_20GCA_5F000751375.1_202014-09- 06] 1,944 sequences; 35,539,942 total letters Query= NC_028112.1 Length=178262 Score E Sequences producing significant alignments: (Bits) Value seq274 264 1e-65 seq1817 170 2e-37 seq600 154 2e-32 seq315 129 7e-25 seq644 87.8 2e-12 >seq274 Length=11782 Score = 264 bits (292), Expect = 1e-65 Identities = 923/1421 (65%), Gaps = 40/1421 (3%) Strand=Plus/Plus Query 80356 AACTCTCCCGCGAGGGTGCGACGCAGA-TACAGGTTTGTAGTGTAAGGCTCAAATGCCTC 80414 ||||| || || ||| ||||| ||| || | ||| | ||||| ||||| || || Sbjct 2212 AACTCGCCAGCAAGGACACGACG-AGAGTAAATGTTCGATGTGTAGGGCTCGAAGCATTC 2270 Query 80415 GTTGTTTCCGAGGATCTGAGCCGTGCTCGCCGTCGGCATCGGGCCGACCAACAGTGAATT 80474 |||||| || || ||||| | ||||| || || ||||| || | || |||| || Sbjct 2271 GTTGTTACCCAGAATCTGGGAAGTGCTAGCAGTGGGCATAGGAGCAACTAACAAGCTGTT 2330 Query 80475 CCGCAGGCCGTGCTTCTTGATATCCTCGCGCAAATCTGACCAAAAATCAACCCCAAC--G 80532 || | || || | |||||| | ||| | || || || || || || | Sbjct 2331 TCGTACACCATGTTGCTTGATTTGCTC-CTTAAGGCTAGCCCAATCCCAGAGATCACTGG 2389 Query 80533 CTGTGACC--CCACATGTCGTGCTGCAAGATGCCCTCCGACGCCGGAGACCCCGCGAACG 80590 ||||| ||||||||||| || | ||| |||| || | ||||| || || | | Sbjct 2390 GGGTGACATTCCACATGTCGTATTGTAGGATACCCTGAGAAACAGGAGAACCTTCGTAAG 2449 Query 80591 TCTCGTACGGGCCCTCCGTCTTGGCCAGCTCACAC-GACTCCATAAGGGCCGCGTGATAA 80649 || ||| | ||||| |||||| | ||| ||| || | | || || || || ||| Sbjct 2450 TCGAGTAGGTACCCTCGACCTTGGCGATCTC-CACGGAGGCAGTTAGAGCAGCATGGTAA 2508 Query 80650 ATGCACTCAAAGACGCCCTTGTTCACACCG-CGCGCCTGTGGGTCGTCGAACGACAAGCC 80708 || ||| |||| |||||||| || | | |||| || ||||| | || | Sbjct 2509 ATAGTCTCGAAGATCTGCTTGTTCA-ACTGTCTGGCCTCCGGAGACTCGAATGGCATACG 2567 Query 80709 CATCATCATGAACACGTCAGCCAGGCCCTGAACGCCGATGGCGATCGGGCGGTGGCGCTT 80768 || | ||| ||| || || |||||||| || | |||| || ||||||||| | Sbjct 2568 CAGTGCTAGGAAGGTGTCTGCAAGACCCTGAACACCTAGACCGATAGGACGGTGGCGCAT 2627 Query 80769 GTT-CGATCGCTCGGCCTCCGGAATTGGGTAAAAGTTATTATCGATGACGCGGTTCAGGT 80827 ||| | | || || || |||| ||||| |||| |||||| | |||||||| Sbjct 2628 GTTGCTGTTGC-GTGCTTCGGGAACGGGGTAGTAGTTGACATCGATAGTTCTGTTCAGGT 2686 Query 80828 TGCGTGTAACAACCCGTGTAACATCATGAAGTTTCTGAAAGTCGAATTGGTTCCCCT--- 80884 || | || || ||| | ||||| || || || || || ||||| || ||| || | Sbjct 2687 TGTGGGTGACGACCTGGGTAACTTCGTGCAGCTTTTGGAAGTC--ATAGGTACCGTTGGT 2744 Query 80885 ----TC-ACAAATGCCGGAAGGCTCAGGGACGCCAGATTGCACACGGCCACCTCTTCAGC 80939 || || |||| ||| || || ||||||| ||||| ||||| ||||| || | Sbjct 2745 GTAGTCAACGAATGACGGCAGCGCAAGAGACGCCAAGTTGCAGACGGCTACCTCATCGGG 2804 Query 80940 ATCTGTAAACTCGACGATTTCCGTGCACAAATTAGAAGACTTAATTGTACCCAGGTTTTT 80999 | | | |||||| || || |||||||| |||||| ||| || || ||||| || Sbjct 2805 AGCCGAGTACTCGATAATCTCAGTGCACAAGTTAGAACTACGAATAGTTCCAAGGTTCTT 2864 Query 81000 CTGGTTTGACTTGGCGTTGCAAGCGTCCTTGTAGCACATGTACGGGGTACCGGTCTCGAC 81059 ||| || |||| |||||| |||||||| |||| | || | ||||||||| Sbjct 2865 CTGATTGCTCTTGCGGTTGCAGTGATCCTTGTAAAGCATGAAGGGATTCCCGGTCTCGGT 2924 Query 81060 CTGTGACTTGAGGATGGCGTCCCAAATCTCGCGCGCCTTGACCACCTTGCGGAATTTGCC 81119 ||| | || || ||||||| ||| | | | ||||| ||| || ||| || Sbjct 2925 CTGAGCCTCCAGAATGGCGTACCATAGTTTCTGGGCCTTAACCTTCTGGCGACCACGACC 2984 Query 81120 TTCGGCCACATACTTGGCGTAAGCTTCGTCGAACTTGGCACCGTGAAGTTCAGTGAGGTC 81179 ||| ||| ||||||| |||| | || || | |||||| | || | || | Sbjct 2985 TTCTGCCTCATACTTCTCGTACAAGGCTTCAAATTCATCACCGTAGACATCGGCAAGACC 3044 Query 81180 TGGGCACTCGTTAGGGCACATCAGGTGCCAGTCGGTGTCGTTCTCTACAGCCTTCATGAA 81239 |||||||| |||||||||| ||| ||| ||| || ||||| ||| ||||||||| Sbjct 3045 CGGGCACTCACTAGGGCACATGAGGGTCCACTCGCCGTTCTTCTCAACACGCTTCATGAA 3104 Query 81240 AGCGTCAGGGATCCAGAGGGCGGTGAACAGGTCGCG-GCAGCGCGCCTCCTCATCACCCT 81298 | |||||| |||||||| ||| ||| || ||||| ||| || | || || | ||| | Sbjct 3105 AAGGTCAGGAATCCAGAGAGCGAGGAAAAGATCGCGAGCA-CGGACTTCTTCTTTACCAT 3163 Query 81299 GGTTGAGGCGCAACTCGAGAAAGTCCATGATGTCCGCATGCCATGGCTCCAGATA----- 81353 |||| ||| | || || || || | || ||| ||||| || || ||||| Sbjct 3164 GGTTCTTGCGAAGGTCAAGGAACTCGAAGACATCCTGGTGCCAGGGTTCGAGATATATAG 3223 Query 81354 -CACGGCGATCGACCCCTTGCGACGGCCACCCTGGTTGACGTAACGGGCAGTCGCGTTAA 81412 | ||| | || |||| | |||||||||| ||||| | ||| || ||| | Sbjct 3224 CAAAGGCACCGGGCCTCTTGTTA---CCACCCTGGTCAACGTATCTGGCGGTGTTGTTGA 3280 Query 81413 ATACACGCAACATAGGGATGATACCATCTGACTGACCGTTCGTACCCACGATACGCGACC 81472 | || |||||||| || | |||||||| || ||| |||||||| |||| || | Sbjct 3281 AAACTCGCAACATGGGCACGATACCATTAGAGGTACCATTCGTACCGGCGATGTATGAGC 3340 Query 81473 CCTTGGCGCGCACCTTGCTGATTGAAAGACCGATGCCACCTGACCACTTTGAAATCTGAG 81532 | | || || | | | ||| |||||||| || || | ||| || ||| | Sbjct 3341 CAGTAGCACGGATCCGGTGGATGTTGAGACCGATACCTCCAGCTGTCTTGGAGATCATGG 3400 Query 81533 CACACCGGTTCATGGTCTCATAAATTCCCTCGATGCTATCTTTTTTCATGTCAAGCAAGA 81592 |||| || | || || || || ||||| || || |||| |||||||||| |||| Sbjct 3401 CACAGGTCTTGAGTGTGTCGTAGATACCCTCAATACTGTCTTCCTTCATGTCAACTAAGA 3460 Query 81593 AACAGCTTGACATCTGAG---GGCTTTTTGAGCCGGCATTGAACAGTGTTGGGGTCGCGT 81649 | ||| | || ||| | || | || || |||||||| || || |||| |||| Sbjct 3461 AGCAGGAGGCCAGCTGTGCCTGGGGTGTT---CCAGCATTGAAAAGAGTGGGGGAAGCGT 3517 Query 81650 GAATGAAATAACGGTTTGACATCAGGTCATAGGTTTCCTTGACGCGTGGAATATCGTCAC 81709 | ||||||| | | ||||| |||| || || | |||| | || || | Sbjct 3518 GGGTGAAATATTTGCTGGACATAAGGTTGTAAGTCTGAATGACTTTCTCTACATTATCGC 3577 Query 81710 CGTGAATACCGATAGCTACACGCATAAACATGTACTGGGGC 81750 | |||||| | ||| |||||||| | ||||| ||| ||| Sbjct 3578 CCCAAATACCAACAGCCACACGCATGATCATGTGCTGTGGC 3618 >seq1817 Length=26529 Score = 170 bits (188), Expect = 2e-37 Identities = 176/228 (77%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| ||||| |||||||| || || |||||||| || || |||||||| ||||| Sbjct 16062 ATGCAGATCTTCGTCAAGACCCTCACTGGCAAGACCATCACCCTTGAGGTGGAGTCCTCC 16121 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | ||| | || | || | || |||||||| ||||| || |||||||| |||||| Sbjct 16122 GACACCATCGACAACGTCAAATCCAAGATTCAGGATAAGGAAGGCATTCCTCCTGACCAG 16181 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCT-AGCAGACTATAA 27584 ||||| | ||||| ||||| |||||||| ||||||| ||| || || ||| ||||| || Sbjct 16182 CAGCGATTGATTTTCGCTGGAAAGCAACTTGAGGATGGTCGCACTCTGAGC-GACTACAA 16240 Query 27585 TGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 |||| ||||||||||| || || || ||| | ||||| || ||||| Sbjct 16241 CATCCAGAAGGAATCCACCCTCCACCTCGTCCTTCGTCTACGTGGTGG 16288 Score = 145 bits (160), Expect = 9e-30 Identities = 171/229 (75%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| |||||||| ||||| | ||||||||||| || || | ||||||||||| Sbjct 16581 ATGCAGATCTTTGTGAAGACTTTGACCGGCAAGACCATCACCTTAGAGGTTGAGTCGTCA 16640 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | ||| | ||| ||||| || || |||||||||||||| ||||| || || || Sbjct 16641 GACACCATCGATAATGTGAAGAGCAAGATCCAGGACAAGGAGGGTATTCCCCCCGATCAA 16700 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCT-AGCAGACTATAA 27584 ||||| || || ||||| |||||||| || || || | || || || ||| ||||| || Sbjct 16701 CAGCGACTTATCTTTGCGGGTAAGCAGCTGGAAGACGGCCGAACTCTCAGC-GACTACAA 16759 Query 27585 TGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGGA 27633 |||| |||||||| || || ||||| || | || || || |||||| Sbjct 16760 CATCCAGAAGGAATCTACCCTCCATCTCGTTCTCCGACTACGTGGTGGA 16808 Score = 140 bits (154), Expect = 4e-28 Identities = 160/215 (74%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 27418 GTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATTGCA 27477 |||||||| |||||||| ||||| || || || ||||| ||||| || | || | Sbjct 16365 GTCAAGACCCTTACCGGAAAGACCATCACCCTCGAGGTGGAGTCTTCGGACACTATCGAC 16424 Query 27478 AATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATT 27537 || | ||| | || || || ||||||||||| || ||||| ||||| ||||| | ||| Sbjct 16425 AACGTTAAGTCGAAGATCCAAGACAAGGAGGGTATCCCTCCCGACCAACAGCGATTGATT 16484 Query 27538 TTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAA 27597 || || || ||||| || ||||||| || |||||| | ||||| || | || ||||| Sbjct 16485 TTCGCCGGCAAGCAGCTTGAGGATGGCCGAACCCTATCCGACTACAACATTCAGAAGGAG 16544 Query 27598 TCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 || ||||| ||||| ||| | ||||| || ||||| Sbjct 16545 TCTACTCTCCATCTTGTCCTCCGTCTCCGTGGTGG 16579 Score = 140 bits (154), Expect = 4e-28 Identities = 170/232 (73%), Gaps = 0/232 (0%) Strand=Plus/Plus Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464 |||||| ||||| |||||||| | || || ||||| || ||||| |||||||| ||| Sbjct 16808 AATGCAGATCTTCGTCAAGACCTTGACAGGAAAGACGATCACTCTGGAGGTTGAATCATC 16867 Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524 || | |||| || | ||| || || ||||||||||| || ||||| || ||||| Sbjct 16868 GGACACGATTGACAACGTCAAGAGCAAGATCCAGGACAAGGAAGGCATTCCCCCTGACCA 16927 Query 27525 GCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAA 27584 || || || || || ||||||||||| | ||||||| ||| || ||| ||||| || Sbjct 16928 ACAACGACTTATCTTCGCTGGTAAGCAGTTGGAGGATGGTCGCACTCTAAGCGACTACAA 16987 Query 27585 TGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGGACAA 27636 |||| ||||| || || || || | || | ||||| || ||||||||| Sbjct 16988 CATCCAGAAGGAGTCGACGCTGCACTTGGTGCTTCGTCTCCGTGGTGGACAA 17039 >seq600 Length=9993 Score = 154 bits (170), Expect = 2e-32 Identities = 172/230 (75%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 27403 ATAATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCA 27462 || ||||| || || |||||||| || || || |||||||| || |||||||| ||||| Sbjct 843 ATCATGCAGATTTTCGTCAAGACCCTCACGGGTAAGACTATCACCCTTGAGGTGGAGTCT 784 Query 27463 GGTGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGAC 27522 | || | ||| | ||| | ||| | || |||||||||||||||||||| || || ||| Sbjct 783 AGCGACACCATCGATAATGTCAAGTCGAAGATTCAGGACAAGGAGGGAATCCCCCCCGAC 724 Query 27523 CAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTAT 27582 || ||||| |||| || || || ||||| ||||| |||| ||| ||||| | ||||| Sbjct 723 CAACAGCGATTAATCTTCGCGGGCAAGCAGCTCGAAGATGGTCGAACCCTCTCCGACTAC 664 Query 27583 AATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 || |||| ||||| ||| || || || || | || || || ||||| Sbjct 663 AACATCCAGAAGGAGAGCACCCTCCACCTTGTGCTCCGCCTACGTGGTGG 614 >seq315 Length=5603 Score = 129 bits (142), Expect = 7e-25 Identities = 160/219 (73%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 27414 CTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCAT 27473 ||| || ||||| || || |||||||| || || || ||||| ||||| || | ||| Sbjct 1293 CTTCGTGAAGACCCTGACGGGCAAGACCATCACCCTCGAGGTGGAGTCTTCCGACACCAT 1234 Query 27474 TGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCT 27533 | ||| | ||| | || || |||||||||||||| || || || ||||| ||||| || Sbjct 1233 CGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGTATCCCCCCCGACCAACAGCGCCT 1174 Query 27534 AATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAA 27593 || || || || ||||| |||||||| | || ||||| | ||||| || |||| || Sbjct 1173 GATCTTCGCCGGAAAGCAGCTCGAGGACGGCCGAACCCTCTCCGACTACAACATCCAGAA 1114 Query 27594 GGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 ||| || || || || || || | ||||| || ||||| Sbjct 1113 GGAGTCTACCCTCCACCTGGTGCTCCGTCTCCGTGGTGG 1075 >seq644 Length=14982 Score = 87.8 bits (96), Expect = 2e-12 Identities = 190/283 (67%), Gaps = 6/283 (2%) Strand=Plus/Minus Query 31984 GACGGCCTCAAGCCTTCACAGCGCAAGGTGATATACGCCTGCCTCAAGAAGAACCTGTCG 32043 |||||| | || || ||||| ||||| || ||||| || || ||| |||||| | Sbjct 12499 GACGGCTTAAAACCCGGTCAGCGAAAGGTCATCTACGCTTGTCTGAAGCGAAACCTGACC 12440 Query 32044 AGTGACATGAAGGTGGCGCAGCTGTCGGGCTACGTGGCAGAGCAAACGGCCTATCACCAC 32103 | |||| |||||| | || || | || || || | || |||||| | || || || Sbjct 12439 AAAGACAAGAAGGTCGTTGAGTTGGCTGGTTATGTATCTGAACAAACGTCATACCATCAT 12380 Query 32104 GGCGAGG---CGTCGCTCCAGGGCACCATTGTCAACCTTGCTCAGAACTTTGTCGGTGCA 32160 || || ||| || |||| || ||| || ||||||||||||||| ||||| | Sbjct 12379 GGTGAAATATCGTTGCACCAG---ACTATTATCGGCCTTGCTCAGAACTTCGTCGGCTCC 12323 Query 32161 AATAACCTGAACTTACTCGAGCCATCTGGACAGTTTGGGACCCGGCTCGCCGGTGGCAAG 32220 || || | |||| |||||||| || | ||||| |||| || || || Sbjct 12322 AACAATGTTAACTGTCTCGAGCCGAGCGGTAACTTTGGTTCCCGACTTCAAGGCGGTTCA 12263 Query 32221 GATGCTGCGAGCTCCCGTTACATCTTCACCCGTCTCGCACCTT 32263 ||||| || ||| | ||||| ||| |||||| ||| | |||| Sbjct 12262 GATGCCGCTAGCCCTCGTTATATCCACACCCGCCTCTCTCCTT 12220 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 570296541457280