Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Daldinia_20eschscholtzii_20[genbank_20GCA_5F000751375.1_202014-09-
06] 1,944 sequences; 35,539,942 total letters
Query= NC_028491.1
Length=98392
Score E
Sequences producing significant alignments: (Bits) Value
seq600 107 1e-18
seq1817 98.7 6e-16
seq315 84.2 1e-11
>seq600
Length=9993
Score = 107 bits (118), Expect = 1e-18
Identities = 151/208 (73%), Gaps = 8/208 (4%)
Strand=Plus/Plus
Query 34504 TGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCAAGTTGT 34563
||||| ||||||||||| || ||||| || || || || ||||| | ||||| || ||
Sbjct 638 TGGAGGGTGCTCTCCTTCTGGATGTTGTAGTCGGAGAGGGTTCGACCATCTTCGAGCTGC 697
Query 34564 TTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTGATCTTT 34623
|| || || || ||||| ||||||||||| || || | |||||||||||| ||| ||
Sbjct 698 TTGCCCGCGAAGATTAATCGCTGTTGGTCGGGGGGGATTCCCTCCTTGTC-CTGAATCTT 756
Query 34624 TGTTTTAACGATA-AAATTGTGTCTTCGCT---CTCCACTTCCACGGTTATCGTTTTACC 34679
| || || || || ||| ||||| |||||| || | ||| || || |||||
Sbjct 757 CGACTTGACATTATCGATGGTG---TCGCTAGACTCCACCTCAAGGGTGATAGTCTTACC 813
Query 34680 GGTTAACGTTTTCACAAAAATCTGCATG 34707
|| | || || || ||||||||||||
Sbjct 814 CGTGAGGGTCTTGACGAAAATCTGCATG 841
>seq1817
Length=26529
Score = 98.7 bits (108), Expect = 6e-16
Identities = 102/134 (76%), Gaps = 0/134 (0%)
Strand=Plus/Minus
Query 34489 AGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGC 34548
||||| | || | ||||||||| |||||| |||||||| || || || || |||||
Sbjct 16570 AGACGGAGGACAAGATGGAGAGTAGACTCCTTCTGAATGTTGTAGTCGGATAGGGTTCGG 16511
Query 34549 TCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCC 34608
| || ||||| || || ||||| || || || ||||||||||| || || | ||||||
Sbjct 16510 CCATCCTCAAGCTGCTTGCCGGCGAAAATCAATCGCTGTTGGTCGGGAGGGATACCCTCC 16451
Query 34609 TTGTCTGTGATCTT 34622
|||||| ||||||
Sbjct 16450 TTGTCTTGGATCTT 16437
Score = 87.8 bits (96), Expect = 1e-12
Identities = 144/205 (70%), Gaps = 2/205 (1%)
Strand=Plus/Minus
Query 34503 ATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCAAGTTG 34562
|||||| || ||||| || ||||| || || || ||||| ||||||| || ||
Sbjct 16784 ATGGAGGGTAGATTCCTTCTGGATGTTGTAGTCGCTGAGAGTTCGGCCGTCTTCCAGCTG 16725
Query 34563 TTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTGATCTT 34622
||||| ||||| || | |||||||| || || || | ||||||||||| |||| |
Sbjct 16724 CTTACCCGCAAAGATAAGTCGCTGTTGATCGGGGGGAATACCCTCCTTGTCCTGGATC-T 16666
Query 34623 TTGTTTTAACGATA-AAATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTTACCGG 34681
| | || || || || |||||| ||| || || | ||| || || || ||||
Sbjct 16665 TGCTCTTCACATTATCGATGGTGTCTGACGACTCAACCTCTAAGGTGATGGTCTTGCCGG 16606
Query 34682 TTAACGTTTTCACAAAAATCTGCAT 34706
| || || |||||||| ||||||||
Sbjct 16605 TCAAAGTCTTCACAAAGATCTGCAT 16581
>seq315
Length=5603
Score = 84.2 bits (92), Expect = 1e-11
Identities = 99/134 (74%), Gaps = 0/134 (0%)
Strand=Plus/Plus
Query 34489 AGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGC 34548
||||| | ||||| ||||| || |||||| || ||||| || || || || |||||
Sbjct 1084 AGACGGAGCACCAGGTGGAGGGTAGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTTCGG 1143
Query 34549 TCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCC 34608
|||| || || || || ||||| || || | ||||||||||| || || | ||||||
Sbjct 1144 CCGTCCTCGAGCTGCTTTCCGGCGAAGATCAGGCGCTGTTGGTCGGGGGGGATACCCTCC 1203
Query 34609 TTGTCTGTGATCTT 34622
||||| ||||||
Sbjct 1204 TTGTCCTGGATCTT 1217
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 314722143268952
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |