Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Daldinia_20eschscholtzii_20[genbank_20GCA_5F000751375.1_202014-09-
06] 1,944 sequences; 35,539,942 total letters
Query= NC_029692.1
Length=362276
Score E
Sequences producing significant alignments: (Bits) Value
seq1817 172 1e-37
seq600 154 3e-32
seq315 150 4e-31
>seq1817
Length=26529
Score = 172 bits (190), Expect = 1e-37
Identities = 166/213 (78%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962
|| || | ||| || || ||||| || |||||||| || || || || | |||||
Sbjct 17020 AGCACCAAGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCGCTTAGAGTGCGACCATCC 16961
Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022
|||| |||||| || ||||||||||| |||||||||||||| |||| ||||||||||||
Sbjct 16960 TCCAACTGCTTACCAGCGAAGATAAGTCGTTGTTGGTCAGGGGGAATGCCTTCCTTGTCC 16901
Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082
|||||||| || ||||| || || ||||| || ||||||||| ||||||||||||
Sbjct 16900 TGGATCTTGCTCTTGACGTTGTCAATCGTGTCCGATGATTCAACCTCCAGAGTGATCGTC 16841
Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCATT 211115
||||| || | ||||| || || | |||||||
Sbjct 16840 TTTCCTGTCAAGGTCTTGACGAAGATCTGCATT 16808
Score = 154 bits (170), Expect = 3e-32
Identities = 163/215 (76%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962
||||| ||||| || ||||| || || |||||||| || || || || | |||||
Sbjct 16273 AGGACGAGGTGGAGGGTGGATTCCTTCTGGATGTTGTAGTCGCTCAGAGTGCGACCATCC 16214
Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022
|| || ||||| || ||||| || | || || ||||||||||||| |||||||| |||
Sbjct 16213 TCAAGTTGCTTTCCAGCGAAAATCAATCGCTGCTGGTCAGGAGGAATGCCTTCCTTATCC 16154
Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082
|| ||||| ||| ||||| ||||||||||| ||| || ||||| || ||||| |||
Sbjct 16153 TGAATCTTGGATTTGACGTTGTCGATGGTGTCGGAGGACTCCACCTCAAGGGTGATGGTC 16094
Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCATTTT 211117
|| || ||||| ||||| || || | |||||| ||
Sbjct 16093 TTGCCAGTGAGGGTCTTGACGAAGATCTGCATGTT 16059
Score = 149 bits (164), Expect = 1e-30
Identities = 153/200 (77%), Gaps = 0/200 (0%)
Strand=Plus/Minus
Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962
|||||||| || ||||| ||||| || || ||||| || || | ||||| | |||||
Sbjct 16564 AGGACAAGATGGAGAGTAGACTCCTTCTGAATGTTGTAGTCGGATAGGGTTCGGCCATCC 16505
Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022
|| ||||||||||| ||||| || | || |||||||| ||||| | || ||||||||
Sbjct 16504 TCAAGCTGCTTGCCGGCGAAAATCAATCGCTGTTGGTCGGGAGGGATACCCTCCTTGTCT 16445
Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082
|||||||| || ||||| ||||| ||||| || || |||||||| ||||| |||
Sbjct 16444 TGGATCTTCGACTTAACGTTGTCGATAGTGTCCGAAGACTCCACCTCGAGGGTGATGGTC 16385
Query 211083 TTTCCCGTGAGAGTCTTTAC 211102
||||| || || ||||| ||
Sbjct 16384 TTTCCGGTAAGGGTCTTGAC 16365
Score = 149 bits (164), Expect = 1e-30
Identities = 166/222 (75%), Gaps = 0/222 (0%)
Strand=Plus/Minus
Query 210893 ACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGT 210952
||| |||| || || || || || || || || || |||||||| || || || ||
Sbjct 16802 ACGTAGTCGGAGAACGAGATGGAGGGTAGATTCCTTCTGGATGTTGTAGTCGCTGAGAGT 16743
Query 210953 CCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCC 211012
| || |||||||||||||| || || |||||||| || ||||| || || |||| ||
Sbjct 16742 TCGGCCGTCTTCCAGCTGCTTACCCGCAAAGATAAGTCGCTGTTGATCGGGGGGAATACC 16683
Query 211013 TTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAG 211072
||||||||||||||||| ||||| || ||||||||||| || |||||||| |
Sbjct 16682 CTCCTTGTCCTGGATCTTGCTCTTCACATTATCGATGGTGTCTGACGACTCAACCTCTAA 16623
Query 211073 AGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
||||| ||||| || || | |||||| ||||| | ||||||
Sbjct 16622 GGTGATGGTCTTGCCGGTCAAAGTCTTCACAAAGATCTGCAT 16581
>seq600
Length=9993
Score = 154 bits (170), Expect = 3e-32
Identities = 164/215 (76%), Gaps = 6/215 (3%)
Strand=Plus/Plus
Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962
|| |||||||| || ||| ||| || |||||||| || || | ||||| | ||||||
Sbjct 629 AGCACAAGGTGGAGGGTGCTCTCCTTCTGGATGTTGTAGTCGGAGAGGGTTCGACCATCT 688
Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022
|| ||||||||||| |||||||| | || |||||||| || || | ||| |||||||||
Sbjct 689 TCGAGCTGCTTGCCCGCGAAGATTAATCGCTGTTGGTCGGGGGGGATTCCCTCCTTGTCC 748
Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTC---AGAGCTTTCAACCTCGAGAGTGATC 211079
|| ||||| || || || ||||||||||| ||| || ||||| || |||||
Sbjct 749 TGAATCTTCGACTTGACATTATCGATGGTGTCGCTAGA---CTCCACCTCAAGGGTGATA 805
Query 211080 GTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
||||| |||||||| ||||| || || | ||||||
Sbjct 806 GTCTTACCCGTGAGGGTCTTGACGAAAATCTGCAT 840
>seq315
Length=5603
Score = 150 bits (166), Expect = 4e-31
Identities = 155/203 (76%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962
|| || ||||| || || ||||| || |||||||| || || | ||||| | || ||
Sbjct 1090 AGCACCAGGTGGAGGGTAGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTTCGGCCGTCC 1149
Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022
|| |||||||| || |||||||| ||||| |||||||| || || | || |||||||||
Sbjct 1150 TCGAGCTGCTTTCCGGCGAAGATCAGGCGCTGTTGGTCGGGGGGGATACCCTCCTTGTCC 1209
Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082
|||||||| || || || ||||||||||| || || |||||||| ||||| |||
Sbjct 1210 TGGATCTTGGACTTGACATTGTCGATGGTGTCGGAAGACTCCACCTCGAGGGTGATGGTC 1269
Query 211083 TTTCCCGTGAGAGTCTTTACAAA 211105
|| ||||| || ||||| || ||
Sbjct 1270 TTGCCCGTCAGGGTCTTCACGAA 1292
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1159123128421560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |