Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Daldinia_20eschscholtzii_20[genbank_20GCA_5F000751375.1_202014-09-
06] 1,944 sequences; 35,539,942 total letters
Query= NC_029997.1
Length=105667
Score E
Sequences producing significant alignments: (Bits) Value
seq1817 100 2e-16
seq600 93.3 3e-14
>seq1817
Length=26529
Score = 100 bits (110), Expect = 2e-16
Identities = 141/198 (71%), Gaps = 0/198 (0%)
Strand=Plus/Plus
Query 23610 AATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCAC 23669
||||||||| ||||| || ||| | || ||||| ||||||||||| || ||||| || |
Sbjct 16808 AATGCAGATCTTCGTCAAGACCTTGACAGGAAAGACGATCACTCTGGAGGTTGAATCATC 16867
Query 23670 GGACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729
|||||| |||| | | || || || ||||| ||||| | || || || ||
Sbjct 16868 GGACACGATTGACAACGTCAAGAGCAAGATCCAGGACAAGGAAGGCATTCCCCCTGACCA 16927
Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789
||| || | || || || || || || |||| || | |||||| || |||| |||||
Sbjct 16928 ACAACGACTTATCTTCGCTGGTAAGCAGTTGGAGGATGGTCGCACTCTAAGCGACTACAA 16987
Query 23790 CATACAAAAAGAGTCCAC 23807
||| || || ||||| ||
Sbjct 16988 CATCCAGAAGGAGTCGAC 17005
>seq600
Length=9993
Score = 93.3 bits (102), Expect = 3e-14
Identities = 138/193 (72%), Gaps = 2/193 (1%)
Strand=Plus/Minus
Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670
|||||||||||||| || ||||||||||| || || ||||| || || || || || |
Sbjct 840 ATGCAGATTTTCGTCAAGACCCTCACGGGTAAGACTATCACCCTTGAGGTGGAGTCTAGC 781
Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729
||||| | || ||| | || | || ||| ||||| || || | || || || ||
Sbjct 780 GACACCATCGATAATGTCAAGTC-GAAGATTCAGGACAAGGAGGGAATCCCCCCCGACCA 722
Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789
|||||| ||||| || || ||||| || || ||||| | || || | ||| |||||
Sbjct 721 ACAGCGATTAATCTTCGCGGGCAAGCAGCTCGAAGATGGTCGAACCCTCTCCGACTACAA 662
Query 23790 CATACAAAAAGAG 23802
||| || || |||
Sbjct 661 CATCCAGAAGGAG 649
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 338001591707552
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |