Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Daldinia_20eschscholtzii_20[genbank_20GCA_5F000751375.1_202014-09- 06] 1,944 sequences; 35,539,942 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq274 205 1e-47 >seq274 Length=11782 Score = 205 bits (226), Expect = 1e-47 Identities = 594/906 (66%), Gaps = 24/906 (3%) Strand=Plus/Plus Query 77924 TTCAAATTCATCTCCCCAAACATCATCCAATCCAGGGCATTCATTTGGGCACATCAATGA 77983 |||||||||||| || | ||||| | | || ||||| ||| | |||||||| | | Sbjct 3012 TTCAAATTCATCACCGTAGACATCGGCAAGACCCGGGCACTCACTAGGGCACATGAGGGT 3071 Query 77984 CCAGTCACCATCTTCCTTAACTCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAA 78043 ||| || || | | || ||| || ||||| || || ||||| ||||| ||||| | || Sbjct 3072 CCACTCGCCGTTCTTCTCAACACGCTTCATGAAAAGGTCAGGAATCCAGAGAGCGAGGAA 3131 Query 78044 TAGATCTCGGGTTCTATGTTCTTCATTTCCTGTATTCTTTTTAAGATCGAGAAACTCCAT 78103 ||||| || | | |||||| || || ||||| ||| || || ||||| | Sbjct 3132 AAGATCGCGAGCACGGACTTCTTCTTTACCATGGTTCTTGCGAAGGTCAAGGAACTCGAA 3191 Query 78104 AATATCAGAATGCCATGGTTCTAGATATATTGCCATAACTCCAGGTCGTTTATTACCTCC 78163 | ||| ||||| ||||| |||||||| || | | || || | || ||||| || Sbjct 3192 GACATCCTGGTGCCAGGGTTCGAGATATATAGCAAAGGCACCGGGCCTCTTGTTACCACC 3251 Query 78164 CTGATCTATATATCTGGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTAGA 78223 ||| || | |||||||||||||| || |||||| |||||| || | ||||| ||||| Sbjct 3252 CTGGTCAACGTATCTGGCGGTGTTGTTGAAAACTCGCAACATGGGCACGATACCATTAGA 3311 Query 78224 TGTTCCATTTGTTCCAGAAATATAACTTCCACTTGCGCGAATATTACTAATGGAT----A 78279 || ||||| || || | || || ||| | || || || | ||||| | Sbjct 3312 GGTACCATTCGTACCGGCGATGTATGAGCCAGTAGCACGGAT----CCGGTGGATGTTGA 3367 Query 78280 TCCCTATTCCTCCTGCCATCTTAGATATTAGAGCGCAACGTTTCAATGTATCGTAGATAC 78339 || || ||||| || |||| || || | || || || | ||| |||||||||| Sbjct 3368 GACCGATACCTCCAGCTGTCTTGGAGATCATGGCACAGGTCTTGAGTGTGTCGTAGATAC 3427 Query 78340 CCTCTATACTGTCATCCATCATGTTAAGAAGAAAACAGCTAGACATTTGATGATGAACAG 78399 |||| |||||||| ||| |||||| || | || ||| | || || || | Sbjct 3428 CCTCAATACTGTCTTCCTTCATGTCAACTAAGAAGCAGGAGGCCAGCTGTGCCTGGGGTG 3487 Query 78400 TTCCTGCATTAAATAATGTCGGAGATGCATGCGTAAACCATTTTTCAGAAAGTAGATTGT 78459 |||| ||||| || | || || || || || || || |||| || | || |||| Sbjct 3488 TTCCAGCATTGAAAAGAGTGGGGGAAGCGTGGGTGAAATATTTGCTGGACATAAGGTTGT 3547 Query 78460 ATGTTTCAATAGCTGATTCTATGTCCCATTGATG-----AATTCCTACCGCTACACGCAT 78514 | || | ||| || |||| | |||| | ||| || || || |||||||| Sbjct 3548 AAGTCTGAATGACT--TTCTCT---ACATTATCGCCCCAAATACCAACAGCCACACGCAT 3602 Query 78515 CAACATATGCTGAGGTCTTTCAACCGTCTTATTATTTATTTTCAACAAGTATGATTTTTC 78574 | ||| ||||| || ||||| || |||| | ||| | |||| | ||| || | || Sbjct 3603 GATCATGTGCTGTGGCCTTTCTACAATCTTCTCATTGAGCTTCAGTAGGTAAGACCTCTC 3662 Query 78575 CAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCTCTCGTAAATAATAACAGAATT 78634 ||| || || || ||||| || | ||| ||||||| ||||| | ||| | || | Sbjct 3663 CAAGGTCTTGAAGCCAAAGTATTGGTAGTTGAAGTCTCGGTCGTAGACAATTGCGGAGTC 3722 Query 78635 TAGTTTATCTTTGTATTTGGTAACA-ATATCCATGACAGTAGTT-GAAATAATAGGAGAT 78692 | | ||||||| | | | ||| || ||| | | || || || |||||||| Sbjct 3723 GAAGTCCTCTTTGTGTCTCATGACACATTCGTATGTC--TCCTTAGAGATCATAGGAGAG 3780 Query 78693 CG-TACACCATTTTTAGGATTAACATAGTTAAATAAATCTTCCATTACATCACTAAATAG 78751 | | || || ||||| || ||||||| | | || || ||| | || | Sbjct 3781 GGCTTCA-TGTTCTTAGGGTTGACATAGTGGTAAAGGTCGCTAATGACAGAAGACCATTG 3839 Query 78752 tttttttGTTTCCTTGTGTAGATTAGATACAGCTATTCTTGCAGCTAGAATAGCATAATC 78811 || ||||||| |||||| || || || || || || | ||| || || ||||||||||| Sbjct 3840 CTTCTTTGTTTGCTTGTGGAGGTTTGACACGGCAATACGTGCGGCAAGGATAGCATAATC 3899 Query 78812 AGGATG 78817 || || Sbjct 3900 CGGGTG 3905 Score = 132 bits (146), Expect = 7e-26 Identities = 352/535 (66%), Gaps = 7/535 (1%) Strand=Plus/Plus Query 76812 GTACGTAGATAGTACATACCAGTTTTTAGACCCAGACTCCATCCGTAGAAATGCATGCTT 76871 ||||| ||||||||||| |||||||| ||||| || |||| ||| |||||||||||| Sbjct 1891 GTACGGAGATAGTACATGCCAGTTTTCAGACCAAGCTTCCAGCCGGTGAAATGCATGCTG 1950 Query 76872 GTCAGTTTGGAATAACTAGGATCGGCTATATGAATATTCATCGACTGACTTTGATCGATG 76931 || | || | | || || |||||||| || | || || |||||||| Sbjct 1951 GTAATCTTCCCCATAGTGGGCTCTCTCATATGAATGTTTAGTGATTGGGATTGATCGACA 2010 Query 76932 AAAGCTCCTCTATCAGCCGCCATTTTTATAATGGTCTTTTGAGGAATTTCCCAAATAGTT 76991 || || || | ||||| ||||| | | ||||| |||| |||||||||| || Sbjct 2011 AAGGCACCACGGTCAGCGGCCATCTGGACGATGGTTCGCTGAGAGATTTCCCAAACGGTC 2070 Query 76992 TTGAAAACTTGTTTGATATCATCTGGAAGGTTTG---TATTTTGAATGGAACCACCATCT 77048 ||| ||| ||||| || | |||| ||||| | || ||||| |||||||| || Sbjct 2071 TTGTAAAGAGCTTTGAGGTCCGCAGGAATGTTTGGAATGTTCTGAATTGAACCACCTTCG 2130 Query 77049 GATATAATTGTATTCTTTATATCATCATTCCACAATTTCCTCTCTGTTAAAACTCTAAGG 77108 | || || ||||| || ||| ||| | | | || | | | || Sbjct 2131 GCAATGATGCGGTTCTTCATGCTGTCAGACCAGAGACCCATGTCAACAAGGTCCTTGAGC 2190 Query 77109 AGATGAGGATTAACTATTTGAAATTCTCCAGACAATACTCTACGAGTGTAAATATTACTG 77168 | ||| ||||| | ||| || || |||| | || | ||||| |||||| || Sbjct 2191 AACCAAGGGTTAACAACTTGGAACTCGCCAGCAAGGACACGACGAGAGTAAATGTTCGAT 2250 Query 77169 GTATATGGTTCCACAGATTCATTGTTTCCCAAAATTTGAGCAGTAGAAGCAGTTGGCATA 77228 || || || || | |||| ||||| |||| ||| || | ||| |||||| |||||| Sbjct 2251 GTGTAGGGCTCGAAGCATTCGTTGTTACCCAGAATCTGGGAAGTGCTAGCAGTGGGCATA 2310 Query 77229 GGTGCCACCAATAAACTATTTCTGAGACCATGTGTTCTGATTTTATCTTTTAGATATTTC 77288 || || || || || || |||| | ||||||| |||||| || || || | Sbjct 2311 GGAGCAACTAACAAGCTGTTTCGTACACCATGTTGCTTGATTTGCTCCTTAAGGCTAGCC 2370 Query 77289 CAATCCCAAAGAT--CTGAAGGTACAACATCCCAAAGATCGTATTGTAGAATTCC 77341 |||||||| |||| ||| ||| |||| ||| | ||||||||||| || || Sbjct 2371 CAATCCCAGAGATCACTGGGGGT--GACATTCCACATGTCGTATTGTAGGATACC 2423 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694651919548160