Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Daldinia_20eschscholtzii_20[genbank_20GCA_5F000751375.1_202014-09-
06] 1,944 sequences; 35,539,942 total letters
Query= NC_032001.1
Length=327147
Score E
Sequences producing significant alignments: (Bits) Value
seq1817 172 1e-37
seq600 154 3e-32
seq315 154 3e-32
seq1257 87.8 4e-12
>seq1817
Length=26529
Score = 172 bits (190), Expect = 1e-37
Identities = 177/229 (77%), Gaps = 2/229 (1%)
Strand=Plus/Minus
Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932
|||||||| || ||||| |||| || | ||| || || ||||||||||||||
Sbjct 17035 CCACCACGGAGACGAAGCACCAAGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCGCTT 16976
Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992
|| ||||| |||||||| | || || || || ||||| | |||||||||||| |||
Sbjct 16975 AGAGTGCGACCATCCTCCAACTGCTTACCAGCGAAGATAAGTCGTTGTTGGTCAGGGGGA 16916
Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTT-ACGGTATCGATAGTGTCCGAAGCTTCGAC 283051
|| || |||||||| |||||||| ||| || ||| | || || |||||||| | ||| ||
Sbjct 16915 ATGCCTTCCTTGTCCTGGATCTT-GCTCTTGACGTTGTCAATCGTGTCCGATGATTCAAC 16857
Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCATT 283100
|| |||||||||||||| || ||||| ||||| ||||| |||||||||
Sbjct 16856 CTCCAGAGTGATCGTCTTTCCTGTCAAGGTCTTGACGAAGATCTGCATT 16808
Score = 163 bits (180), Expect = 6e-35
Identities = 167/218 (77%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931
||||||||| || || || || ||||| | || || || || ||||||||||| |
Sbjct 16580 ACCACCACGGAGACGGAGGACAAGATGGAGAGTAGACTCCTTCTGAATGTTGTAGTCGGA 16521
Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991
|| || ||||||||||| || || || ||||| || ||||| || |||||||| ||
Sbjct 16520 TAGGGTTCGGCCATCCTCAAGCTGCTTGCCGGCGAAAATCAATCGCTGTTGGTCGGGAGG 16461
Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051
||||||||||||||||||||||| | || ||| | |||||||||||||||| || ||
Sbjct 16460 GATACCCTCCTTGTCTTGGATCTTCGACTTAACGTTGTCGATAGTGTCCGAAGACTCCAC 16401
Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGA 283089
||||| ||||| ||||| || || | ||||| ||||
Sbjct 16400 CTCGAGGGTGATGGTCTTTCCGGTAAGGGTCTTGACGA 16363
Score = 154 bits (170), Expect = 3e-32
Identities = 172/230 (75%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932
|||||||| || ||||| || || || | ||| ||| || ||||||||||||||
Sbjct 16288 CCACCACGTAGACGAAGGACGAGGTGGAGGGTGGATTCCTTCTGGATGTTGTAGTCGCTC 16229
Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992
|| ||||| |||||||| ||||| || || || || ||||| || || |||||| |||
Sbjct 16228 AGAGTGCGACCATCCTCAAGTTGCTTTCCAGCGAAAATCAATCGCTGCTGGTCAGGAGGA 16169
Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052
|| || ||||| || || ||||| | ||| ||| | ||||| ||||| || | || ||
Sbjct 16168 ATGCCTTCCTTATCCTGAATCTTGGATTTGACGTTGTCGATGGTGTCGGAGGACTCCACC 16109
Query 283053 TCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCATTTT 283102
|| || ||||| ||||| || || | ||||| ||||| |||||||| ||
Sbjct 16108 TCAAGGGTGATGGTCTTGCCAGTGAGGGTCTTGACGAAGATCTGCATGTT 16059
Score = 147 bits (162), Expect = 5e-30
Identities = 171/228 (75%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932
|||||||| || || || || ||||| | || ||| || ||||||||||||||
Sbjct 16807 CCACCACGTAGTCGGAGAACGAGATGGAGGGTAGATTCCTTCTGGATGTTGTAGTCGCTG 16748
Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992
|| || ||||| || || || || || || |||||||| | || ||||| || |||
Sbjct 16747 AGAGTTCGGCCGTCTTCCAGCTGCTTACCCGCAAAGATAAGTCGCTGTTGATCGGGGGGA 16688
Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTT-ACGGTATCGATAGTGTCCGAAGCTTCGAC 283051
|||||||||||||| |||||||| ||| || || ||||||| ||||| || | || ||
Sbjct 16687 ATACCCTCCTTGTCCTGGATCTT-GCTCTTCACATTATCGATGGTGTCTGACGACTCAAC 16629
Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099
|| | ||||| ||||| || ||||||||||| || || ||||||||
Sbjct 16628 CTCTAAGGTGATGGTCTTGCCGGTCAAAGTCTTCACAAAGATCTGCAT 16581
>seq600
Length=9993
Score = 154 bits (170), Expect = 3e-32
Identities = 171/228 (75%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931
||||||||| ||||| || || || || | ||||| || || |||||||||||||| |
Sbjct 613 ACCACCACGTAGGCGGAGCACAAGGTGGAGGGTGCTCTCCTTCTGGATGTTGTAGTCGGA 672
Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991
|| || || ||||| || || || || || || ||||| || || |||||||| ||
Sbjct 673 GAGGGTTCGACCATCTTCGAGCTGCTTGCCCGCGAAGATTAATCGCTGTTGGTCGGGGGG 732
Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051
|| ||||||||||| || ||||| | || || ||||||| ||||| || || ||
Sbjct 733 GATTCCCTCCTTGTCCTGAATCTTCGACTTGACATTATCGATGGTGTCGCTAGACTCCAC 792
Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099
|| || ||||| ||||||||||| | ||||| ||||| ||||||||
Sbjct 793 CTCAAGGGTGATAGTCTTACCCGTGAGGGTCTTGACGAAAATCTGCAT 840
>seq315
Length=5603
Score = 154 bits (170), Expect = 3e-32
Identities = 165/218 (76%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932
|||||||| || || || ||||| || | || || || |||||||||||||| |
Sbjct 1075 CCACCACGGAGACGGAGCACCAGGTGGAGGGTAGACTCCTTCTGGATGTTGTAGTCGGAG 1134
Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992
|| || ||||| ||||| || || || ||||| ||||||| || |||||||| ||
Sbjct 1135 AGGGTTCGGCCGTCCTCGAGCTGCTTTCCGGCGAAGATCAGGCGCTGTTGGTCGGGGGGG 1194
Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052
|||||||||||||| |||||||| | || || | ||||| ||||| |||| || ||
Sbjct 1195 ATACCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATGGTGTCGGAAGACTCCACC 1254
Query 283053 TCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAA 283090
||||| ||||| ||||| ||||||| ||||| |||||
Sbjct 1255 TCGAGGGTGATGGTCTTGCCCGTCAGGGTCTTCACGAA 1292
>seq1257
Length=2089
Score = 87.8 bits (96), Expect = 4e-12
Identities = 168/248 (68%), Gaps = 0/248 (0%)
Strand=Plus/Plus
Query 230163 ATCGTCACAGAAGTAGTTGCAAATGAAAAGGAGTTCATTTGCGACGCTATTCCTTGCCGT 230222
||| ||||||| | || || | ||| | || ||| | || ||| | || || |
Sbjct 703 ATCATCACAGATGCTGTCGCCATCGAACAAGAATTCCTGACTGAGGCTCTGCCCTGTGCT 762
Query 230223 CTTATCGGCATGAATGCTGATCTCATGGGGCAATATATCGAATTCGTAGCTGATCGTATT 230282
|| | |||||||| || | | ||| |||||| ||||| ||||| || || || |
Sbjct 763 CTGCTGGGCATGAACGCCAACTTGATGAAGCAATACATCGAGTTCGTCGCCGACCGCCTA 822
Query 230283 TTCGTGGCGCTAGGGTACGAGAAAGTGTATAACTCCAAGAACCCCTTCGCTTTTATGGAG 230342
| || || || || ||||||| || || || | |||||||||| || ||||||
Sbjct 823 CTGGTCGCTCTCGGCAACGAGAAGGTCTACCGATCTACCAACCCCTTCGACTTCATGGAG 882
Query 230343 CTCATTTCACTCCAGGGGAAAACTAACTTCTTCGAAAAGCGTGTCAGCGATTATCAAAGG 230402
||| || || || || || ||||||||||| ||||||||| | || || || | |
Sbjct 883 AACATCTCCCTTGGTGGCAAGACCAACTTCTTCGAGAAGCGTGTCGGTGACTACCAGAAG 942
Query 230403 CCCGGTGT 230410
|||||||
Sbjct 943 GCCGGTGT 950
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1046713128343376
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |