Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Daldinia_20eschscholtzii_20[genbank_20GCA_5F000751375.1_202014-09-
06] 1,944 sequences; 35,539,942 total letters
Query= NC_032255.1
Length=112536
Score E
Sequences producing significant alignments: (Bits) Value
seq600 136 3e-27
seq315 132 3e-26
seq1817 129 4e-25
>seq600
Length=9993
Score = 136 bits (150), Expect = 3e-27
Identities = 158/213 (74%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 44128 CACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTC 44187
||| ||||| || ||||||||||| ||||||||||| |||| ||| || | || ||
Sbjct 631 CACAAGGTGGAGGGTGCTCTCCTTCTGGATGTTGTAGTCGGAGAGGGTTCGACCATCTTC 690
Query 44188 CAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGT 44247
|||||||| || || ||||| || ||||| || || | || | || ||||| |||
Sbjct 691 GAGCTGCTTGCCCGCGAAGATTAATCGCTGTTGGTCGGGGGGGATTCCCTCCTTGTCCTG 750
Query 44248 TATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTT 44307
|||||| ||| | | | ||||||||| || |||||||| | || || |||||
Sbjct 751 AATCTTCGACTTGACATTATCGATGGTGTCGCTAGACTCCACCTCAAGGGTGATAGTCTT 810
Query 44308 TCCCGTGAGGGTCTTCACGAAGATTTGCATGAT 44340
|||||||||||||| ||||| || ||||||||
Sbjct 811 ACCCGTGAGGGTCTTGACGAAAATCTGCATGAT 843
>seq315
Length=5603
Score = 132 bits (146), Expect = 3e-26
Identities = 153/204 (75%), Gaps = 4/204 (2%)
Strand=Plus/Plus
Query 44128 CACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTC 44187
||||||||| || || |||||| ||||||||||| |||| ||| || |||| ||
Sbjct 1092 CACCAGGTGGAGGGTAGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTTCGGCCGTCCTC 1151
Query 44188 CAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGT 44247
|||||||| ||||| ||||||| ||||| || || | || | ||| ||||| |||
Sbjct 1152 GAGCTGCTTTCCGGCGAAGATCAGGCGCTGTTGGTCGGGGGGGATACCCTCCTTGTCCTG 1211
Query 44248 TATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTC 44305
||||| ||| || ||| | |||||||||| || |||||||| | || || |||
Sbjct 1212 GATCTTGGACTTGACATTGT--CGATGGTGTCGGAAGACTCCACCTCGAGGGTGATGGTC 1269
Query 44306 TTTCCCGTGAGGGTCTTCACGAAG 44329
|| ||||| |||||||||||||||
Sbjct 1270 TTGCCCGTCAGGGTCTTCACGAAG 1293
>seq1817
Length=26529
Score = 129 bits (142), Expect = 4e-25
Identities = 159/215 (74%), Gaps = 2/215 (1%)
Strand=Plus/Minus
Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188
|| ||||| || ||| ||||| ||||||||||| ||| || ||| | || ||
Sbjct 16270 ACGAGGTGGAGGGTGGATTCCTTCTGGATGTTGTAGTCGCTCAGAGTGCGACCATCCTCA 16211
Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248
|| ||||| || || || ||||| |||||||| || | ||| | |||||||| |||
Sbjct 16210 AGTTGCTTTCCAGCGAAAATCAATCGCTGCTGGTCAGGAGGAATGCCTTCCTTATCCTGA 16151
Query 44249 ATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTT 44307
||||| | || | ||| | |||||||||| ||| |||||||| | || || |||||
Sbjct 16150 ATCTTG-GATTTGACGTTGTCGATGGTGTCGGAGGACTCCACCTCAAGGGTGATGGTCTT 16092
Query 44308 TCCCGTGAGGGTCTTCACGAAGATTTGCATGATGT 44342
|| ||||||||||| |||||||| |||||| |||
Sbjct 16091 GCCAGTGAGGGTCTTGACGAAGATCTGCATGTTGT 16057
Score = 109 bits (120), Expect = 4e-19
Identities = 142/193 (74%), Gaps = 4/193 (2%)
Strand=Plus/Minus
Query 44147 TCCTTTTGGATGTTGTAATCG--GCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAA 44204
||||| ||||||||||| ||| | ||||| | || |||| ||||||||||| || ||||
Sbjct 16771 TCCTTCTGGATGTTGTAGTCGCTGAGAGTTCG-GC-CGTCTTCCAGCTGCTTACCCGCAA 16714
Query 44205 AGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATG 44264
|||| | ||||| ||||| | || | ||| ||||| ||| ||||| |||||
Sbjct 16713 AGATAAGTCGCTGTTGATCGGGGGGAATACCCTCCTTGTCCTGGATCTTGCTCTTCACAT 16654
Query 44265 TTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCA 44324
| | |||||||| | || || ||||| | || || ||||| || || | |||||||
Sbjct 16653 TATCGATGGTGTCTGACGACTCAACCTCTAAGGTGATGGTCTTGCCGGTCAAAGTCTTCA 16594
Query 44325 CGAAGATTTGCAT 44337
| ||||| |||||
Sbjct 16593 CAAAGATCTGCAT 16581
Score = 109 bits (120), Expect = 4e-19
Identities = 150/210 (71%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 44128 CACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTC 44187
||||| ||| ||||| |||||| ||||||||||| ||| || ||| | || ||
Sbjct 17018 CACCAAGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCGCTTAGAGTGCGACCATCCTC 16959
Query 44188 CAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGT 44247
|| |||||| || || ||||| | || || || || | || | |||||||| |||
Sbjct 16958 CAACTGCTTACCAGCGAAGATAAGTCGTTGTTGGTCAGGGGGAATGCCTTCCTTGTCCTG 16899
Query 44248 TATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTT 44307
||||| ||| | | | || ||||| | ||||| ||||||| || ||||||||
Sbjct 16898 GATCTTGCTCTTGACGTTGTCAATCGTGTCCGATGATTCAACCTCCAGAGTGATCGTCTT 16839
Query 44308 TCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
||| || | |||||| |||||||| |||||
Sbjct 16838 TCCTGTCAAGGTCTTGACGAAGATCTGCAT 16809
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 359981870927448
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |