Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Daldinia_20eschscholtzii_20[genbank_20GCA_5F000751375.1_202014-09- 06] 1,944 sequences; 35,539,942 total letters Query= NC_032255.1 Length=112536 Score E Sequences producing significant alignments: (Bits) Value seq600 136 3e-27 seq315 132 3e-26 seq1817 129 4e-25 >seq600 Length=9993 Score = 136 bits (150), Expect = 3e-27 Identities = 158/213 (74%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 44128 CACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTC 44187 ||| ||||| || ||||||||||| ||||||||||| |||| ||| || | || || Sbjct 631 CACAAGGTGGAGGGTGCTCTCCTTCTGGATGTTGTAGTCGGAGAGGGTTCGACCATCTTC 690 Query 44188 CAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGT 44247 |||||||| || || ||||| || ||||| || || | || | || ||||| ||| Sbjct 691 GAGCTGCTTGCCCGCGAAGATTAATCGCTGTTGGTCGGGGGGGATTCCCTCCTTGTCCTG 750 Query 44248 TATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTT 44307 |||||| ||| | | | ||||||||| || |||||||| | || || ||||| Sbjct 751 AATCTTCGACTTGACATTATCGATGGTGTCGCTAGACTCCACCTCAAGGGTGATAGTCTT 810 Query 44308 TCCCGTGAGGGTCTTCACGAAGATTTGCATGAT 44340 |||||||||||||| ||||| || |||||||| Sbjct 811 ACCCGTGAGGGTCTTGACGAAAATCTGCATGAT 843 >seq315 Length=5603 Score = 132 bits (146), Expect = 3e-26 Identities = 153/204 (75%), Gaps = 4/204 (2%) Strand=Plus/Plus Query 44128 CACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTC 44187 ||||||||| || || |||||| ||||||||||| |||| ||| || |||| || Sbjct 1092 CACCAGGTGGAGGGTAGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTTCGGCCGTCCTC 1151 Query 44188 CAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGT 44247 |||||||| ||||| ||||||| ||||| || || | || | ||| ||||| ||| Sbjct 1152 GAGCTGCTTTCCGGCGAAGATCAGGCGCTGTTGGTCGGGGGGGATACCCTCCTTGTCCTG 1211 Query 44248 TATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTC 44305 ||||| ||| || ||| | |||||||||| || |||||||| | || || ||| Sbjct 1212 GATCTTGGACTTGACATTGT--CGATGGTGTCGGAAGACTCCACCTCGAGGGTGATGGTC 1269 Query 44306 TTTCCCGTGAGGGTCTTCACGAAG 44329 || ||||| ||||||||||||||| Sbjct 1270 TTGCCCGTCAGGGTCTTCACGAAG 1293 >seq1817 Length=26529 Score = 129 bits (142), Expect = 4e-25 Identities = 159/215 (74%), Gaps = 2/215 (1%) Strand=Plus/Minus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 || ||||| || ||| ||||| ||||||||||| ||| || ||| | || || Sbjct 16270 ACGAGGTGGAGGGTGGATTCCTTCTGGATGTTGTAGTCGCTCAGAGTGCGACCATCCTCA 16211 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 || ||||| || || || ||||| |||||||| || | ||| | |||||||| ||| Sbjct 16210 AGTTGCTTTCCAGCGAAAATCAATCGCTGCTGGTCAGGAGGAATGCCTTCCTTATCCTGA 16151 Query 44249 ATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTT 44307 ||||| | || | ||| | |||||||||| ||| |||||||| | || || ||||| Sbjct 16150 ATCTTG-GATTTGACGTTGTCGATGGTGTCGGAGGACTCCACCTCAAGGGTGATGGTCTT 16092 Query 44308 TCCCGTGAGGGTCTTCACGAAGATTTGCATGATGT 44342 || ||||||||||| |||||||| |||||| ||| Sbjct 16091 GCCAGTGAGGGTCTTGACGAAGATCTGCATGTTGT 16057 Score = 109 bits (120), Expect = 4e-19 Identities = 142/193 (74%), Gaps = 4/193 (2%) Strand=Plus/Minus Query 44147 TCCTTTTGGATGTTGTAATCG--GCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAA 44204 ||||| ||||||||||| ||| | ||||| | || |||| ||||||||||| || |||| Sbjct 16771 TCCTTCTGGATGTTGTAGTCGCTGAGAGTTCG-GC-CGTCTTCCAGCTGCTTACCCGCAA 16714 Query 44205 AGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATG 44264 |||| | ||||| ||||| | || | ||| ||||| ||| ||||| ||||| Sbjct 16713 AGATAAGTCGCTGTTGATCGGGGGGAATACCCTCCTTGTCCTGGATCTTGCTCTTCACAT 16654 Query 44265 TTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCA 44324 | | |||||||| | || || ||||| | || || ||||| || || | ||||||| Sbjct 16653 TATCGATGGTGTCTGACGACTCAACCTCTAAGGTGATGGTCTTGCCGGTCAAAGTCTTCA 16594 Query 44325 CGAAGATTTGCAT 44337 | ||||| ||||| Sbjct 16593 CAAAGATCTGCAT 16581 Score = 109 bits (120), Expect = 4e-19 Identities = 150/210 (71%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 44128 CACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTC 44187 ||||| ||| ||||| |||||| ||||||||||| ||| || ||| | || || Sbjct 17018 CACCAAGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCGCTTAGAGTGCGACCATCCTC 16959 Query 44188 CAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGT 44247 || |||||| || || ||||| | || || || || | || | |||||||| ||| Sbjct 16958 CAACTGCTTACCAGCGAAGATAAGTCGTTGTTGGTCAGGGGGAATGCCTTCCTTGTCCTG 16899 Query 44248 TATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTT 44307 ||||| ||| | | | || ||||| | ||||| ||||||| || |||||||| Sbjct 16898 GATCTTGCTCTTGACGTTGTCAATCGTGTCCGATGATTCAACCTCCAGAGTGATCGTCTT 16839 Query 44308 TCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 ||| || | |||||| |||||||| ||||| Sbjct 16838 TCCTGTCAAGGTCTTGACGAAGATCTGCAT 16809 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 359981870927448