Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Daldinia_20eschscholtzii_20[genbank_20GCA_5F000751375.1_202014-09-
06] 1,944 sequences; 35,539,942 total letters
Query= NC_033775.1
Length=376207
Score E
Sequences producing significant alignments: (Bits) Value
seq1817 156 1e-32
seq315 145 2e-29
seq600 143 6e-29
>seq1817
Length=26529
Score = 156 bits (172), Expect = 1e-32
Identities = 158/206 (77%), Gaps = 0/206 (0%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| || ||||| || || ||||| || || || |||||||| |||||||| ||| |||
Sbjct 16065 CAGATCTTCGTCAAGACCCTCACTGGCAAGACCATCACCCTTGAGGTGGAGTCCTCCGAC 16124
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|||||||| ||||||||| ||||||||||| || ||||| || ||||| ||||||||
Sbjct 16125 ACCATCGACAACGTCAAATCCAAGATTCAGGATAAGGAAGGCATTCCTCCTGACCAGCAG 16184
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
||| | || ||||| ||||| || || || ||||| | ||||| ||| || ||| ||
Sbjct 16185 CGATTGATTTTCGCTGGAAAGCAACTTGAGGATGGTCGCACTCTGAGCGACTACAACATC 16244
Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129
|| || ||||| || || || || ||
Sbjct 16245 CAGAAGGAATCCACCCTCCACCTCGT 16270
Score = 141 bits (156), Expect = 2e-28
Identities = 155/205 (76%), Gaps = 1/205 (0%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| || ||||| || || | |||||||| |||||||| || ||||| ||| || |||
Sbjct 16812 CAGATCTTCGTCAAGACCTTGACAGGAAAGACGATCACTCTGGAGGTTGAATCATCGGAC 16871
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| || || |||||||| ||||| |||||||| ||||| || || || ||||| |||
Sbjct 16872 ACGATTGACAACGTCAAGAGCAAGATCCAGGACAAGGAAGGCATTCCCCCTGACCAACAA 16931
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|||||||||||||| || || ||| | || ||||| | ||||| ||| || ||| ||
Sbjct 16932 CGACTTATCTTCGCTGGTAAGCAGTTGGAGGATGGTCGCACTCTAAGCGACTACAACATC 16991
Query 178104 CAAAAAGAATCAACACTGCATCTTG 178128
|| || || || || ||||| ||||
Sbjct 16992 CAGAAGGAGTCGACGCTGCA-CTTG 17015
Score = 134 bits (148), Expect = 3e-26
Identities = 149/199 (75%), Gaps = 0/199 (0%)
Strand=Plus/Plus
Query 177931 TCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCATCG 177990
|||| || || || || ||||| || ||||||||||||||||| || ||||| ||||
Sbjct 16363 TCGTCAAGACCCTTACCGGAAAGACCATCACCCTCGAGGTGGAGTCTTCGGACACTATCG 16422
Query 177991 AGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTA 178050
| ||||| || ||||| || ||||| || || |||||||| ||||| || ||| | |
Sbjct 16423 ACAACGTTAAGTCGAAGATCCAAGACAAGGAGGGTATCCCTCCCGACCAACAGCGATTGA 16482
Query 178051 TCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAG 178110
| |||||||| || ||||| || ||||| | || || |||| || ||| | || || |
Sbjct 16483 TTTTCGCCGGCAAGCAGCTTGAGGATGGCCGAACCCTATCCGACTACAACATTCAGAAGG 16542
Query 178111 AATCAACACTGCATCTTGT 178129
| || || || ||||||||
Sbjct 16543 AGTCTACTCTCCATCTTGT 16561
Score = 127 bits (140), Expect = 5e-24
Identities = 157/215 (73%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| || || ||||| ||| | || || || || |||||| | ||||| || ||||||
Sbjct 16584 CAGATCTTTGTGAAGACTTTGACCGGCAAGACCATCACCTTAGAGGTTGAGTCGTCAGAC 16643
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|||||||| || || || ||||| |||||||| || || || || || || || ||
Sbjct 16644 ACCATCGATAATGTGAAGAGCAAGATCCAGGACAAGGAGGGTATTCCCCCCGATCAACAG 16703
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
||||||||||| || || || ||||| ||||| || | ||||| ||| || ||| ||
Sbjct 16704 CGACTTATCTTTGCGGGTAAGCAGCTGGAAGACGGCCGAACTCTCAGCGACTACAACATC 16763
Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGACT 178138
|| || ||||| || || ||||| ||| | ||||
Sbjct 16764 CAGAAGGAATCTACCCTCCATCTCGTTCTCCGACT 16798
>seq315
Length=5603
Score = 145 bits (160), Expect = 2e-29
Identities = 152/200 (76%), Gaps = 0/200 (0%)
Strand=Plus/Minus
Query 177930 TTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCATC 177989
|||||||| || || || || || || ||||||||||||||||| || |||||||||
Sbjct 1292 TTCGTGAAGACCCTGACGGGCAAGACCATCACCCTCGAGGTGGAGTCTTCCGACACCATC 1233
Query 177990 GAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTT 178049
|| || ||||| ||||| |||||||| || || ||||| || ||||| || || ||
Sbjct 1232 GACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGTATCCCCCCCGACCAACAGCGCCTG 1173
Query 178050 ATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAA 178109
|||||||||||||| |||||||| || || | || || |||| || ||| |||| ||
Sbjct 1172 ATCTTCGCCGGAAAGCAGCTCGAGGACGGCCGAACCCTCTCCGACTACAACATCCAGAAG 1113
Query 178110 GAATCAACACTGCATCTTGT 178129
|| || || || || || ||
Sbjct 1112 GAGTCTACCCTCCACCTGGT 1093
>seq600
Length=9993
Score = 143 bits (158), Expect = 6e-29
Identities = 158/209 (76%), Gaps = 6/209 (3%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAA---AGCTCA 177980
|| |||||||| || || ||||| || || || |||||||| |||||||| |||
Sbjct 837 CAGATTTTCGTCAAGACCCTCACGGGTAAGACTATCACCCTTGAGGTGGAGTCTAGC--- 781
Query 177981 GACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAG 178040
||||||||||| || ||||| |||||||||||||| || |||||||| || |||||
Sbjct 780 GACACCATCGATAATGTCAAGTCGAAGATTCAGGACAAGGAGGGAATCCCCCCCGACCAA 721
Query 178041 CAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAAC 178100
|| ||| | |||||||| || || |||||||||||||| | || || |||| || |||
Sbjct 720 CAGCGATTAATCTTCGCGGGCAAGCAGCTCGAAGATGGTCGAACCCTCTCCGACTACAAC 661
Query 178101 GTCCAAAAAGAATCAACACTGCATCTTGT 178129
|||| || || || || || |||||
Sbjct 660 ATCCAGAAGGAGAGCACCCTCCACCTTGT 632
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1203701218065136
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |