Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Daldinia_20eschscholtzii_20[genbank_20GCA_5F000751375.1_202014-09-
06] 1,944 sequences; 35,539,942 total letters
Query= NC_033780.1
Length=144510
Score E
Sequences producing significant alignments: (Bits) Value
seq600 170 2e-37
seq315 159 3e-34
seq1817 125 7e-24
seq993 95.1 1e-14
>seq600
Length=9993
Score = 170 bits (188), Expect = 2e-37
Identities = 179/231 (77%), Gaps = 6/231 (3%)
Strand=Plus/Plus
Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695
|| || ||||| || | ||| || || || |||||||||||||| ||||| |||||||||
Sbjct 614 CCACCACGTAGGCGGAGCACAAGGTGGAGGGTGCTCTCCTTCTGGATGTTGTAGTCGGAG 673
Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755
||||| || | || |||||||||||||| ||||| || | ||||||||||| | |||
Sbjct 674 AGGGTTCGACCATCTTCGAGCTGCTTGCCCGCGAAGATTAATCGCTGTTGGTCGGGGGGG 733
Query 41756 ACGCTCTCCTTGTCCATGATTTTTTG-CTT--CAACGACGACACAGTGTCGCTCGACTCC 41812
| | |||||||||| ||| | || | ||| || || | |||||||| ||||||
Sbjct 734 ATTCCCTCCTTGTCC-TGAATCTTCGACTTGACATTATCG--ATGGTGTCGCTAGACTCC 790
Query 41813 ACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863
||||| | || || || |||||||| || ||||| |||||||||||||||
Sbjct 791 ACCTCAAGGGTGATAGTCTTACCCGTGAGGGTCTTGACGAAAATCTGCATG 841
>seq315
Length=5603
Score = 159 bits (176), Expect = 3e-34
Identities = 169/221 (76%), Gaps = 4/221 (2%)
Strand=Plus/Plus
Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694
||| || || ||||| | |||||| || || || ||||||||| ||||| ||||||||
Sbjct 1074 GCCACCACGGAGACGGAGCACCAGGTGGAGGGTAGACTCCTTCTGGATGTTGTAGTCGGA 1133
Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGG 41754
|||||| || |||| ||||||||||| |||||||| ||||||||||||||||| | |||
Sbjct 1134 GAGGGTTCGGCCGTCCTCGAGCTGCTTTCCGGCGAAGATCAGGCGCTGTTGGTCGGGGGG 1193
Query 41755 AACGCTCTCCTTGTCCATGATTTTTTGCTT--CAACGACGACACAGTGTCGCTCGACTCC 41812
| | |||||||||| ||| || ||| || | || | |||||| ||||||
Sbjct 1194 GATACCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCG--ATGGTGTCGGAAGACTCC 1251
Query 41813 ACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAA 41853
||||| | || || || || |||||||| ||||| |||||
Sbjct 1252 ACCTCGAGGGTGATGGTCTTGCCCGTCAGGGTCTTCACGAA 1292
>seq1817
Length=26529
Score = 125 bits (138), Expect = 7e-24
Identities = 160/218 (73%), Gaps = 2/218 (1%)
Strand=Plus/Minus
Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695
|| || || ||||| | || ||||| || || ||||||||||||||| ||||||||
Sbjct 16579 CCACCACGGAGACGGAGGACAAGATGGAGAGTAGACTCCTTCTGAATGTTGTAGTCGGAT 16520
Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755
||||| || | || || ||||||||||||||||| |||| ||||||||||| | ||
Sbjct 16519 AGGGTTCGGCCATCCTCAAGCTGCTTGCCGGCGAAAATCAATCGCTGTTGGTCGGGAGGG 16460
Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814
| | ||||||||| ||| || ||| |||| | | | |||||| ||||||||
Sbjct 16459 ATACCCTCCTTGTCTTGGATCTTCGACTT-AACGTTGTCGATAGTGTCCGAAGACTCCAC 16401
Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGA 41852
||| | || || || || || || || ||||| ||||
Sbjct 16400 CTCGAGGGTGATGGTCTTTCCGGTAAGGGTCTTGACGA 16363
Score = 122 bits (134), Expect = 8e-23
Identities = 172/239 (72%), Gaps = 2/239 (1%)
Strand=Plus/Minus
Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694
||| || |||||||| | || || || || ||| |||||||| ||||| ||||||
Sbjct 16289 GCCACCACGTAGACGAAGGACGAGGTGGAGGGTGGATTCCTTCTGGATGTTGTAGTCGCT 16230
Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGG 41754
|| ||||| | || || || ||||| || ||||| |||| ||||| ||||| | ||
Sbjct 16229 CAGAGTGCGACCATCCTCAAGTTGCTTTCCAGCGAAAATCAATCGCTGCTGGTCAGGAGG 16170
Query 41755 AACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCA 41813
|| || ||||| ||| ||| | || | || ||| | | | |||||| |||||||
Sbjct 16169 AATGCCTTCCTTATCC-TGAATCTTGGATTTGACGTTGTCGATGGTGTCGGAGGACTCCA 16111
Query 41814 CCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATGTTATCGATG 41872
|||| | || || || || || || || ||||| ||||| ||||||||||| ||| ||
Sbjct 16110 CCTCAAGGGTGATGGTCTTGCCAGTGAGGGTCTTGACGAAGATCTGCATGTTGTCGGTG 16052
>seq993
Length=24289
Score = 95.1 bits (104), Expect = 1e-14
Identities = 84/105 (80%), Gaps = 0/105 (0%)
Strand=Plus/Plus
Query 85803 ATCGCACCTCGTTCCGGCCTCGCCAGCAAGCACGGTATCGACGTGGGCGCCGGGGTCATC 85862
||||| || || |||||||||||| ||||||| |||||| ||||||||| ||| ||
Sbjct 2 ATCGCCCCGCGCTCCGGCCTCGCCGCCAAGCACTTCATCGACACGGGCGCCGGCGTCGTC 61
Query 85863 GACGCCGACTACCGCGGAAACGTCATCATCGTACTCTTCAACCAC 85907
||||||||||||||||| ||||| || | || |||||||||
Sbjct 62 GACGCCGACTACCGCGGCCCCGTCAAGGTCCTCCTGTTCAACCAC 106
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 462292766012800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |