Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Daldinia_20sp._20EC12_20[genbank_20GCA_5F002120325.1_202017-05-11] 398 sequences; 37,551,009 total letters Query= NC_000852.5 Length=330611 Score E Sequences producing significant alignments: (Bits) Value seq1 149 1e-30 >seq1 Length=2525816 Score = 149 bits (164), Expect = 1e-30 Identities = 321/470 (68%), Gaps = 10/470 (2%) Strand=Plus/Minus Query 230173 TTTGCCGAGCGTCTCGTCGCCTGGGTGTGTGTTGAAGGTATTCTGTTTTCCG-GGAGT-T 230230 ||||| |||||||| | |||| | ||| || ||||| || | ||| | || | | Sbjct 592528 TTTGCTCAGCGTCTCATTGCCTTCGCTGCTGTCGAGGGTAT-CT-TCTTCAGTGGTGCAT 592471 Query 230231 TCTGCGCCATCTTTTGGCTGCGGAACAAAGGTGTGATGCCTGGCCTCGGTCTGTCTAACG 230290 || | ||||||| ||| || ||| ||| ||||||| || ||| | || |||| Sbjct 592470 TCGCCTCCATCTTCTGGTTGAAGAAGCGTGGTCTGATGCCCGGTCTCACCTTCTCCAACG 592411 Query 230291 AGTTCATCAGTCGCGACGAGGGTCTCCATCAACAGTTCGGCGAGCTTATGTATTCAAAGC 230350 || ||||| ||| || |||||||| || | |||| | || || |||||| | | Sbjct 592410 AGCTCATCTCTCGTGATGAGGGTCTACACACTGACTTCG-CTTGCCTAC-TATTCACA-C 592354 Query 230351 TCCAGAACAAGCTACCATTCGAGACGGTCAAACAAA---TCATTACAGAAGCAGTTGAAA 230407 || || || | || | || |||| || | |||| ||||| || || | | Sbjct 592353 ACCTCAAGAACCGCCCCGGCAAGGACGTCATCCAGAAGATCATCACAGATGCTGTCGCCA 592294 Query 230408 ACGAAAAGGAGTTCATTTGTGACGCTATTCCATGTCGCCTTATTGGCATGAACGCTGAAC 230467 |||| |||| ||| | || ||| | || ||| || | ||||||||||| | Sbjct 592293 TCGAACAGGAATTCCTGACCGAGGCTCTGCCCTGTGCTCTGCTGGGCATGAACGCCAATT 592234 Query 230468 TTATGGGACAGTACATCGAATTCGTAGCCGACCGCATTTTTGTTGCACTTGGTTACGAGA 230527 | ||| || |||||||| ||||| ||||||||| | | || || || || |||||| Sbjct 592233 TGATGAAGCAATACATCGAGTTCGTCGCCGACCGCCTACTGGTCGCTCTCGGCAACGAGA 592174 Query 230528 AAGTGTACAACTCTAAGAACCCCTTTGCATTTATGGAGCTCATTTCGCTTCAAGGGAAGA 230587 | || ||| |||| |||||||| | || |||||| |||||| ||| || |||| Sbjct 592173 AGGTCTACCGATCTACCAACCCCTTCGACTTCATGGAGAACATTTCCCTTGGTGGCAAGA 592114 Query 230588 CCAACTTCTTCGAAAAGCGTGTCAGTGACTATCAGAGGCCTGGTGTGATG 230637 ||||||||||||| ||||||||| ||||||| |||| | | ||||| ||| Sbjct 592113 CCAACTTCTTCGAGAAGCGTGTCGGTGACTACCAGAAGGCCGGTGTCATG 592064 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1057818605758740