Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Daldinia_20sp._20EC12_20[genbank_20GCA_5F002120325.1_202017-05-11] 398 sequences; 37,551,009 total letters Query= NC_001611.1 Length=185578 Score E Sequences producing significant alignments: (Bits) Value seq10 224 1e-53 seq1 100 3e-16 >seq10 Length=1071462 Score = 224 bits (248), Expect = 1e-53 Identities = 748/1156 (65%), Gaps = 26/1156 (2%) Strand=Plus/Minus Query 53701 CAATGCAATAGATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCATATTGTATTAT 53760 || ||||| ||| |||| || || ||||||||||||| | | ||| || | || || Sbjct 417936 CAGTGCAAGAGACGCCAAGTTGCAGACGGCTACCTCATCGGGAGCCGAGTACTCGATAAT 417877 Query 53761 CTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTT 53820 |||||||| | || || || ||||| | || | || || ||||| ||| Sbjct 417876 TTCAGTGCACAAGTTGGAACTGCGAATAGTTCCAAGGTTCTTCTGGTTGCTCTTGCGGTT 417817 Query 53821 ACACGCATCCTTATAAAGAATGAATGGCGTACCAGTTTCAATCTGGGATTCTATAATCGC 53880 ||| |||||| ||||| ||||| || | || || || |||||| || | ||| || Sbjct 417816 ACAGTGATCCTTGTAAAGCATGAAGGGATTTCCGGTCTCGGTCTGGGCCTCCAGAATGGC 417757 Query 53881 TTTCCAGACGACACGAGCCTTTA--TTATAG--ATTTGTATCTCTTTTCTCTTTCGTATA 53936 | ||| | | ||||| | || | | | | || | ||| | | | | Sbjct 417756 GTACCATAGCTTCTGGGCCTTAACCTTCTGGCGACCACGACCTTCTGCCTCATACTTCTC 417697 Query 53937 GTGTATACAATCGTTCAAACTCGTCTCCCCAAACATTGTCCAATCCAGGACATTCATCCG 53996 || |||| |||||| || || || | |||| | | | || || || ||| | Sbjct 417696 GT----ACAAGGCTTCAAATTCATCACCGTACACATCGGCAAGACCCGGGCACTCACTAG 417641 Query 53997 GACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCC 54056 | ||||| | | ||| || |||| | || || || ||||| || ||||| ||||||| Sbjct 417640 GGCACATGAGGGTCCATTCGCCGTTCTTCTCAACACGCTTCATGAAAAGATCGGGAATCC 417581 Query 54057 AAAGAGCTATAAATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGAT 54116 | ||||| | || ||||| | | | || || || || ||||| ||||| Sbjct 417580 AGAGAGCAAGGAAAAGATCGCGAGCACGGACCTCTTCTTTACCGTGGTTCTTGCGAAGAT 417521 Query 54117 CGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGTCATAACTCCAGGCC 54176 | |||||| | | | ||| ||||| ||||| | || || | | | || |||| Sbjct 417520 CAAGGAACTCGAAGACATCCTGGTGCCAGGGTTCGAGATAGATAGCAAAGGCACCGGGCC 417461 Query 54177 GTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAA 54236 ||||| || ||||| || | |||||| |||||||| || |||||| |||||| || | Sbjct 417460 TCTTGTTACCACCCTGGTCAACGTATCTGGCGGTGTTGTTGAAAACTCGCAACATGGGTA 417401 Query 54237 TAATACCATTGGATGCACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATATTAC 54296 |||||||| || | |||||| || |||| ||| || ||| ||||||| || Sbjct 417400 CGATACCATTAGAGGTACCATTCGTACCGGCGATGTATGAGCCAGTGGCACGGATGCGGT 417341 Query 54297 TAATTGATAGACCTATCCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTAT 54356 ||| ||||| || || || || | || ||||| | || || || | || | Sbjct 417340 GAATGTTGAGACCGATACCTCCAGCTGTCTTGGAGATCATGGCACAGGTCTTGAGTGTGT 417281 Query 54357 CATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGT 54416 | ||||||||||| ||||| || ||| |||||| | || || ||| | || || Sbjct 417280 CGTAGATGCCCTCAATACTGTCTTCCTTCATGTCGACTAAGAAGCAGGATGCCAGCTG-- 417223 Query 54417 GACGACT----AGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCA 54472 || || ||||| ||||| || | |||||||||||||| || || |||| Sbjct 417222 --CGCCTGGGGTGTTCCAGCATTGAAAAGAGTAGGAGAAGCGTGGGTGAAATATTTGCTG 417165 Query 54473 GAAAGTAGATTGTACGTCTCGATAGCTGAGTCTA---TATC-CCATTGATGAATTCCTAC 54528 || | || ||||| |||| || || |||| |||| || |||| || || Sbjct 417164 GACATAAGGTTGTAGGTCTGAATGACTTTCTCTACATTATCGCCCCAGATG----CCAAC 417109 Query 54529 TGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAGCAA 54588 || |||||||| | ||||||||| |||||||| |||||||| | || | || || | Sbjct 417108 AGCCACACGCATGATCATGTGCTGTGGTCTTTCTACGATCTTCTCATTGAGCTTTAGTAG 417049 Query 54589 GTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAAT 54648 || || | ||||| || || || ||||| || | ||| |||||||| ||||| | Sbjct 417048 ATAAGACCTCTCCAAGGTCTTGAAGCCAAAGTATTGGTAGTTGAAGTCTCGGTCGTAGAC 416989 Query 54649 AATAACTGAGTTGAGTTTATCCTTATATTTGTTAACTACATCCATGGTAATACTT-GAAA 54707 ||| | |||| | | ||||| | | | | || |||| | | | ||| || | Sbjct 416988 AATTGCGGAGTCAAAGTCCTCCTTGTGTCTCATGAC-ACATTCGTATGTCTCCTTGGAGA 416930 Query 54708 TAATCGGAGAATGTTTCCCATTTTTAGGATTGACATAGTTAAATAAATCCTTCATCACTT 54767 | || ||||| | ||| || ||||| || ||||||| | | ||| | || || Sbjct 416929 TCATAGGAGAGGGCTTCATGTTCTTAGGGTTAACATAGTGGTAGAGATCGCTAATGACAG 416870 Query 54768 CACTAAATAGtttttttGTTTCTTTGTGTAGATTTGATACGGCTATTCTAGCGGCTAGAA 54827 | || | || || |||| ||||| || || || ||||| || | ||||| || | Sbjct 416869 AAGACCATTGCTTCTTCGTTTGCTTGTGGAGGTTGGACACGGCAATACGTGCGGCAAGGA 416810 Query 54828 TGGCATAATCCGGATG 54843 | ||||||||||| || Sbjct 416809 TAGCATAATCCGGGTG 416794 >seq1 Length=2525816 Score = 100 bits (110), Expect = 3e-16 Identities = 332/508 (65%), Gaps = 19/508 (4%) Strand=Plus/Plus Query 23844 TTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTACCTTCTAATGATATATTT 23903 || ||||| ||||| ||||| || ||||| || || || || || | | || || || Sbjct 592077 TTCTGGTAGTCACCGACACGCTTCTCGAAGAAGTTGGTCTTGCCACCAAGGGAAATGTTC 592136 Query 23904 TCCATGAAATCGGATGGATTGGTAACATTATAGATTCTTTTAAATCCCAATTCAGAAATC 23963 |||||||| ||| | || |||||| |||| ||| | | || | || | | Sbjct 592137 TCCATGAAGTCGAAGGGGTTGGTAGATCGGTAGAC-CTTCTCGTTGCCGAG--AGCGACC 592193 Query 23964 AAT---CTATCTGCGACAAACTCCATATATGTTTTCATCATTTCACAATTCATTCCTATA 24020 | | | || ||||| ||||| || ||| ||||||| | ||||| || | Sbjct 592194 AGTAGGCGGTCGGCGACGAACTCGATGTATTGCTTCATCAAATTGGCGTTCATGCCCAGC 592253 Query 24021 AGTTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATAGAGACCGCGTCTGTTATA 24080 || | || |||||| | || || ||||| ||||| || | ||| || ||||| || Sbjct 592254 AGAGCACAGGGCAGAGCCTCGGTCAGGAATTCCTGTTCGATGGCGACAGCATCTGTGAT- 592312 Query 24081 ATAGATCTTACTGTTT--CTTCACT--CGGTG-GATACAATAAATGTTTAAACATCAAAC 24135 |||||| ||| | | || | ||| | | | | | ||| | || | | | Sbjct 592313 ---GATCTT-CTGGATGACGTCCTTGCCGGGGCGGTTCTTGAGGTGTGTGAATAGTAGGC 592368 Query 24136 ATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTC 24195 | ||||| || |||||||||||| || | | || | |||||||| || ||||| | Sbjct 592369 AAGCGAAGTCAGTGTGTAGACCCTCATCACGAGAGATGAGCTCGTTGGAGAAGGTGAGAC 592428 Query 24196 CGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAA 24255 ||||||| || |||||||| || | ||| || ||||| || |||| ||| ||||| | Sbjct 592429 CGGGCATCAGACCACGCTTCTTCAACCAGAAGATGGAGGCGAATGCACCACTGAAGAAGA 592488 Query 24256 TTCCTTCTACTGCCGCAAAGGCAATAAGTCTTTCTCCATAACCGGCG---CTGTCATGTA 24312 | || || || || || |||||||| || | | || | || | ||||| | Sbjct 592489 TACCCTCGACAGCAGCGAAGGCAATGAGACGCTGAGCAAAGGTGGAGTTCTTGTCAGAAA 592548 Query 24313 TCCACTTTTGAGCCCAATCGGCCTTCTT 24340 |||| | ||||||| ||||||||||| Sbjct 592549 TCCATTGCAGAGCCCAGTCGGCCTTCTT 592576 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 593718646235040