Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Daldinia_20sp._20EC12_20[genbank_20GCA_5F002120325.1_202017-05-11] 398 sequences; 37,551,009 total letters Query= NC_002331.1 Length=178733 Score E Sequences producing significant alignments: (Bits) Value seq39 107 2e-18 seq16 107 2e-18 >seq39 Length=331608 Score = 107 bits (118), Expect = 2e-18 Identities = 144/198 (73%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 42987 GTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCA 43046 ||||||||||| || || ||||| || | || || || |||| || |||||||| || Sbjct 20953 GTGCTCTCCTTCTGGATGTTGTAGTCGGAGAGGGTTCGGCCGTCTTCGAGCTGCTTGCCG 20894 Query 43047 GCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTG-TTT 43105 ||||| || | |||||| ||||||| || | | |||||||||| ||| | || | || Sbjct 20893 GCGAAGATTAATCGCTGTTGGTCGGGGGGGATTCCCTCCTTGTCC-TGAATCTTGGACTT 20835 Query 43106 GAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGT 43165 || | | | |||||||| || ||||| || | ||||| || || ||||| || || Sbjct 20834 GACATTGTCGATAGTGTCGCTAGACTCCACCTCAAGGGTGATAGTCTTACCCGTGAGGGT 20775 Query 43166 CTTTACAAAGATTTGCAT 43183 ||| || || || ||||| Sbjct 20774 CTTGACGAAAATCTGCAT 20757 >seq16 Length=747318 Score = 107 bits (118), Expect = 2e-18 Identities = 143/196 (73%), Gaps = 2/196 (1%) Strand=Plus/Minus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||| ||||| ||||| || |||||| || |||| || || ||||| |||||||| Sbjct 127574 CTCCTTCTGAATGTTGTAGTCGCTCAGAGTGCGACCGTCCTCGAGTTGCTTTCCAGCGAA 127515 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCG 43110 || | |||||||||||| | || | || ||||| ||| ||| | || | ||||| Sbjct 127514 AATCAATCGCTGCTGGTCAGGAGGAATGCCTTCCTTATCC-TGAATCTTCGATTTGACAT 127456 Query 43111 TCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTA 43170 | | | |||||| || ||||| || | |||||||| ||||| || || ||||| | Sbjct 127455 TGTCGATGGTGTCGGAGGACTCCACCTCAAGGGTGATGGTCTTGCCAGTGAGGGTCTTGA 127396 Query 43171 CAAAGATTTGCATTTT 43186 | ||||| ||||| || Sbjct 127395 CGAAGATCTGCATGTT 127380 Score = 100 bits (110), Expect = 3e-16 Identities = 166/237 (70%), Gaps = 2/237 (1%) Strand=Plus/Minus Query 42949 CCTATTGTCCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGT 43008 |||||||||| || | | ||| | |||||| |||| || |||||| || || |||| Sbjct 128364 CCTATTGTCCACCACGGAGACGAAGCACCAAGTGCAGCGTCGACTCCTTCTGGATGTTGT 128305 Query 43009 AATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGT 43068 | || ||||| || | || || | ||||||||||||||| || ||||| || |||| Sbjct 128304 AGTCGCTTAGAGTGCGGCCATCCTCCAACTGCTTACCAGCGAAGATAAGTCGTTGTTGGT 128245 Query 43069 CGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCG-CCACCGTGTCGCTC 43127 | | || | | ||||||||| ||| || |||| ||| | | | |||||| Sbjct 128244 CAGGGGGAATACCTTCCTTGTCCTGGATCTTGCTCTTGA-CGTTGTCAATCGTGTCCGAT 128186 Query 43128 GATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCATT 43184 ||||| || || | ||||| || || || || | ||||| || ||||| |||||| Sbjct 128185 GATTCAACTTCCAGAGTGATCGTCTTTCCTGTCAAGGTCTTGACGAAGATCTGCATT 128129 Score = 96.9 bits (106), Expect = 4e-15 Identities = 138/192 (72%), Gaps = 2/192 (1%) Strand=Plus/Minus Query 42993 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 43052 ||||| || |||||||| || || || || |||| || ||||||||||| || || Sbjct 128092 TCCTTCTGGATATTGTAGTCGCTGAGGGTTCGGCCGTCTTCCAGCTGCTTACCCGCAAAG 128033 Query 43053 ATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGT-TTGAGCGT 43111 || |||||||| ||||||| || | | |||||||||| ||| | || | || | | Sbjct 128032 ATAAGTCGCTGTTGGTCGGGGGGAATACCCTCCTTGTCC-TGAATCTTGCTCTTCACATT 127974 Query 43112 CGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 43171 | | ||||| ||| || || || | |||||||| ||||| || || ||||| || Sbjct 127973 ATCGATGGTGTCTGACGACTCGACCTCTAAGGTGATGGTCTTGCCGGTCAGAGTCTTCAC 127914 Query 43172 AAAGATTTGCAT 43183 |||||| ||||| Sbjct 127913 AAAGATCTGCAT 127902 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 571814755207440