Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Daldinia_20sp._20EC12_20[genbank_20GCA_5F002120325.1_202017-05-11] 398 sequences; 37,551,009 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq1 125 6e-24 seq16 123 2e-23 >seq1 Length=2525816 Score = 125 bits (138), Expect = 6e-24 Identities = 242/351 (69%), Gaps = 12/351 (3%) Strand=Plus/Minus Query 57958 CCACGTTCGCCGAGAGGCTAATCGCGTTCGCCGCCGTCGAAGGTATATTCTTT--TCGGG 58015 |||| || || || | || || || ||||| || ||||| ||||| ||||| | | | Sbjct 592533 CCACCTTTGCTCAGCGTCTCATTGCCTTCGCTGCTGTCGAGGGTATCTTCTTCAGTGGTG 592474 Query 58016 CAGCTTTGCGGCAATATTTTGGATGAAGAAACGCGGCCTGATGCCCGGCCTGACGTTTAG 58075 || || || | || || ||| ||||||| || || ||||||||||| || || || Sbjct 592473 CA--TTCGCCTCCATCTTCTGGTTGAAGAAGCGTGGTCTGATGCCCGGTCTCACCTTCTC 592416 Query 58076 CAACGAGTTGATATCGCGCGACGAGGGTCTCCATACTGATTTTGCGTGCCTAATGTACTC 58135 ||||||| | || || || || |||||||| || ||||| || || |||||| || || Sbjct 592415 CAACGAGCTCATCTCTCGTGATGAGGGTCTACACACTGACTTCGCTTGCCTA--CTATTC 592358 Query 58136 TCACATTGTCAATAAACCGACGCG----GGATCGCATCTTGGACATTATCACCGAGGCGG 58191 |||| |||| ||||| | || ||| |||| | | || ||||| || || | Sbjct 592357 ACACA-CCTCAA-GAACCGCCCCGGCAAGGACGTCATCCAGAAGATCATCACAGATGCTG 592300 Query 58192 TCGCGATCGAAAATGAGTTTGTCACCGAAGCCCTACCGGTGGCCATGCTCGGTATGAACA 58251 |||| |||||| | || || | ||||| || || || || |||| || |||||| Sbjct 592299 TCGCCATCGAACAGGAATTCCTGACCGAGGCTCTGCCCTGTGCTCTGCTGGGCATGAACG 592240 Query 58252 ATGATTTGATGTCAAAGTACATTGAGTTTGTTGCCGACAGACTTTTGCTCG 58302 |||||||| | ||||| ||||| || |||||| | || || ||| Sbjct 592239 CCAATTTGATGAAGCAATACATCGAGTTCGTCGCCGACCGCCTACTGGTCG 592189 >seq16 Length=747318 Score = 123 bits (136), Expect = 2e-23 Identities = 157/216 (73%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 31190 AACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCG 31249 |||||||| || ||||| ||||| || || ||||| || |||||| | || || || | Sbjct 127380 AACATGCAGATCTTCGTCAAGACCCTCACTGGCAAGACCATCACCCTTGAGGTGGAGTCC 127439 Query 31250 TCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGAC 31309 ||||||| |||| | |||||| || || ||| ||||||||| | || || ||| Sbjct 127440 TCCGACACCATCGACAATGTCAAATCGAAGATTCAGGATAAGGAAGGCATTCCTCCTGAC 127499 Query 31310 CAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTAT 31369 |||||||| | || |||||||| || || | || ||| | ||| ||||||| || Sbjct 127500 CAGCAGCGATTGATTTTCGCTGGAAAGCAACTCGAGGACGGTCGCACTCTGAGCGACTAC 127559 Query 31370 AACATTCAAAAAGAATCGACTCTTCATCTGGTACTT 31405 |||||||| || || || || || ||||| || ||| Sbjct 127560 AACATTCAGAAGGAGTCCACCCTCCATCTCGTCCTT 127595 Score = 102 bits (112), Expect = 7e-17 Identities = 154/216 (71%), Gaps = 6/216 (3%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| || ||||| ||||| ||||||| || |||||||| | || |||||| | || Sbjct 128130 ATGCAGATCTTCGTCAAGACCTTGACAGGAAAGACGATCACTCTGGAAGTTGAATCATCG 128189 Query 31253 GACAGTGTCGAAACGGTCAAACAGAG-AATAGC--GGACAAGGAAGGCGTGCCGCCCGAC 31309 |||| | || | ||||| ||| || | | |||||||||||| | || || ||| Sbjct 128190 GACACGATTGACAACGTCAA---GAGCAAGATCCAGGACAAGGAAGGTATTCCCCCTGAC 128246 Query 31310 CAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTAT 31369 || || || || || |||||||| || |||||||| || ||| | ||||| || Sbjct 128247 CAACAACGACTTATCTTCGCTGGTAAGCAGTTGGAGGATGGCCGCACTCTAAGCGACTAC 128306 Query 31370 AACATTCAAAAAGAATCGACTCTTCATCTGGTACTT 31405 ||||| || || || ||||| || || |||| ||| Sbjct 128307 AACATCCAGAAGGAGTCGACGCTGCACTTGGTGCTT 128342 Score = 100 bits (110), Expect = 3e-16 Identities = 153/218 (70%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| || || || ||||||||||| ||||| || |||||| | || || || |||| Sbjct 127902 ATGCAGATCTTTGTGAAGACTCTGACCGGCAAGACCATCACCTTAGAGGTCGAGTCGTCA 127961 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| |||| | || || | || ||||||||| || | || |||||||| Sbjct 127962 GACACCATCGATAATGTGAAGAGCAAGATTCAGGACAAGGAGGGTATTCCCCCCGACCAA 128021 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 ||||| || || || || || || ||| |||||||| || | ||||| || || Sbjct 128022 CAGCGACTTATCTTTGCGGGTAAGCAGCTGGAAGACGGCCGAACCCTCAGCGACTACAAT 128081 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACT 31410 || || || ||||| || |||||||| || || |||| Sbjct 128082 ATCCAGAAGGAATCTACCCTTCATCTCGTTCTCCGACT 128119 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445764182312160