Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Daldinia_20sp._20EC12_20[genbank_20GCA_5F002120325.1_202017-05-11] 398 sequences; 37,551,009 total letters Query= NC_003225.3 Length=309286 Score E Sequences producing significant alignments: (Bits) Value seq1 138 2e-27 seq10 104 5e-17 >seq1 Length=2525816 Score = 138 bits (152), Expect = 2e-27 Identities = 314/470 (67%), Gaps = 7/470 (1%) Strand=Plus/Minus Query 101919 TTGCCTTTGCTGCAGTTGAAGGAATCTTCTTTAGTGGTGCATTCGCATCCATTTTCTGGA 101978 ||||||| ||||| || || || |||||||| |||||||||||||| ||||| |||||| Sbjct 592512 TTGCCTTCGCTGCTGTCGAGGGTATCTTCTTCAGTGGTGCATTCGCCTCCATCTTCTGGT 592453 Query 101979 TCAAGAACAGGGGTATTTTGCCTGGTCTCACCTCCTCCAATGAGTTCATTTCTAGGGACG 102038 | ||||| | ||| | |||| |||||||||| |||||| ||| |||| ||| | || | Sbjct 592452 TGAAGAAGCGTGGTCTGATGCCCGGTCTCACCTTCTCCAACGAGCTCATCTCTCGTGATG 592393 Query 102039 AAGGTCTTCATCGCGACTTTGCATGCATGCTGTTGAAAAAGGGTTTTGTTGA--TACCCC 102096 | ||||| || ||||| || ||| | || || | | | | || |||| Sbjct 592392 AGGGTCTACACACTGACTTCGCTTGCCTACTATTCACACA----CCTCAAGAACCGCCCC 592337 Query 102097 ATCAAGAGAAAGGATTCTTGAAATTGTCACTGAAGCCGTCCGAATTGAACAAGAATTTCT 102156 |||| || || | | || |||| || || ||| || ||||| ||||| || Sbjct 592336 GGCAAG-GACGTCATCCAGAAGATCATCACAGATGCTGTCGCCATCGAACAGGAATTCCT 592278 Query 102157 CACAGTTTCCCTGCCTGTTAAATTAGTGGGAATGAACTGCAAGTTGATGAGCCAGTACAT 102216 || | | ||||| | | |||| |||||| ||| ||||||| || ||||| Sbjct 592277 GACCGAGGCTCTGCCCTGTGCTCTGCTGGGCATGAACGCCAATTTGATGAAGCAATACAT 592218 Query 102217 TGAATTTGTGGCAGATAAACTATTGGTTGAAATGGGACTAGAAAAGCACTATAATGTTAC 102276 || || || || || ||| |||| | | || || ||| ||| ||| Sbjct 592217 CGAGTTCGTCGCCGACCGCCTACTGGTCGCTCTCGGCAACGAGAAGGTCTACCGATCTAC 592158 Query 102277 CAACCCCTTCCCATTCATGGACAATATTTCCCTCGAGAATAAGACCAACTTTTTTGAAAA 102336 |||||||||| |||||||| || |||||||| | ||||||||||| || || || Sbjct 592157 CAACCCCTTCGACTTCATGGAGAACATTTCCCTTGGTGGCAAGACCAACTTCTTCGAGAA 592098 Query 102337 GAGAGTCGCCGAGTATCAACGTGCCCAGGTCATGGCTTCTATCAATAAGA 102386 | | |||| || || || ||| ||||||||| | ||| |||| Sbjct 592097 GCGTGTCGGTGACTACCAGAAGGCCGGTGTCATGGCTAGCACCAAGAAGA 592048 >seq10 Length=1071462 Score = 104 bits (114), Expect = 5e-17 Identities = 416/645 (64%), Gaps = 20/645 (3%) Strand=Plus/Minus Query 94399 CCTTCAGCCTCATATTTCTCGTACAACGCCTTAAACTCTTCGCCATGGACGTCGGAAAGG 94458 ||||| |||||||| ||||||||||| || | ||| || || || | || |||| ||| Sbjct 417716 CCTTCTGCCTCATACTTCTCGTACAAGGCTTCAAATTCATCACCGTACACATCGGCAAGA 417657 Query 94459 CCAGGGCACTCGTGGGGGCACATCAGGGACCAATTCTTCCCAGCCTTC---ACTCTCTCC 94515 || |||||||| |||||||| |||| || |||| || |||| || | || | Sbjct 417656 CCCGGGCACTCACTAGGGCACATGAGGGTCC-ATTC--GCCGTTCTTCTCAACACGCTTC 417600 Query 94516 ATGAAGAGATCAGATACCCAGATAGCTGGGAAAAGATCCCTCGTCCTCAAATCTTCATTA 94575 ||||| ||||| | | ||||| ||| |||||||||| | | | | ||||| ||| Sbjct 417599 ATGAAAAGATCGGGAATCCAGAGAGCAAGGAAAAGATCGCGAGCACGGACCTCTTCTTTA 417540 Query 94576 CCGGCATTCTTTCTGCAG-TCAATAAAGTCCTTCACGTCCAGATGCCAATCAGAAATATA 94634 ||| ||||| | | || |||| || || || ||| | ||||| | ||| Sbjct 417539 CCGTGGTTCTTGC-GAAGATCAAGGAACTCGAAGACATCCTGGTGCCAGGGTTCGAGATA 417481 Query 94635 GATGGCTGCAGCTCCTCTCCTCTTGTCTCCTCCCTGGCTAACCTTTTTCACAGAGACGTT 94694 ||| || || || |||||||| || |||||| ||| | | | | | | ||| Sbjct 417480 GATAGCAAAGGCACCGGGCCTCTTGTTACCACCCTGGTCAACGTATCTGGCGGTGTTGTT 417421 Query 94695 AAAGATTTGGAGGAACGCCATGAGACCAGGGTGGGTACCACTC--CATGACGA--AATGG 94750 || | | | | | | | || |||| ||||||| || | ||| ||| Sbjct 417420 GAAAACTCGCAACATGGGTACGATACCATTAGAGGTACCATTCGTACCGGCGATGTATGA 417361 Query 94751 GGCTTCCTTTTGCCCTCAAATCATGAAAGTGGATGCCGAGTCCTCCAGCAGTCTTGGAGA 94810 | || | || | | |||| || || |||| |||||||| |||||||||| Sbjct 417360 G----CCAGTGGCACGGATGCGGTGAATGTTGAGACCGATACCTCCAGCTGTCTTGGAGA 417305 Query 94811 TGATTGCCGCCTCCTTAAGAGTATCATAAATACCCTCAATGCTATCATCTTGAAGGCCCA 94870 | || || ||| || || || || || |||||||| || || || | | | | | Sbjct 417304 TCATGGCACAGGTCTTGAGTGTGTCGTAGATGCCCTCAATACTGTCTTCCTTCATGTCGA 417245 Query 94871 GAAGGAAGCACGAGGAAAGTTGGGGTGTGACTGTTCCACAATTAAACAGTGTGGGGGAAG 94930 | |||||| || | || || | | ||||||| ||| || || || || |||| Sbjct 417244 CTAAGAAGCAGGATGCCAGCTGCGCCTGGGGTGTTCCAGCATTGAAAAGAGTAGGAGAAG 417185 Query 94931 CATGGGTAAAATAGTGCCTCGACATGAGATCATATGTTTCAATGACAGATTTGATGTCTG 94990 | ||||| ||||| | || ||||| || | || || | |||||| || | | Sbjct 417184 CGTGGGTGAAATATTTGCTGGACATAAGGTTGTAGGTCTGAATGAC--TTTCTCTACATT 417127 Query 94991 AT--CCGTGAATGCCGACAGCCACACGCATAATCATGTCCTGAGG 95033 || || ||||| |||||||||||||| ||||||| ||| || Sbjct 417126 ATCGCCCCAGATGCCAACAGCCACACGCATGATCATGTGCTGTGG 417082 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 989578953740090