Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Daldinia_20sp._20EC12_20[genbank_20GCA_5F002120325.1_202017-05-11] 398 sequences; 37,551,009 total letters Query= NC_003391.1 Length=205719 Score E Sequences producing significant alignments: (Bits) Value seq10 223 5e-53 seq1 96.9 5e-15 >seq10 Length=1071462 Score = 223 bits (246), Expect = 5e-53 Identities = 750/1157 (65%), Gaps = 28/1157 (2%) Strand=Plus/Minus Query 65732 CAATGCAACAGATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCATATTGTATTAT 65791 || ||||| ||| |||| || || ||||||||||||| | | ||| || | || || Sbjct 417936 CAGTGCAAGAGACGCCAAGTTGCAGACGGCTACCTCATCGGGAGCCGAGTACTCGATAAT 417877 Query 65792 CTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTT 65851 |||||||| | || || || ||||| | || | || || ||||| ||| Sbjct 417876 TTCAGTGCACAAGTTGGAACTGCGAATAGTTCCAAGGTTCTTCTGGTTGCTCTTGCGGTT 417817 Query 65852 ACACGCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGC 65911 ||| |||||| ||||| ||||| ||| | || || || |||| | || | ||| || Sbjct 417816 ACAGTGATCCTTGTAAAGCATGAAGGGATTTCCGGTCTCGGTCTGGGCCTCCAGAATGGC 417757 Query 65912 TTTCCAGACGACTC-GAGCCTTTA--TTATAG--ATTTGTATCTCTTTTCTCTTTCGTAT 65966 | ||| | | || | ||||| | || | | | | || | ||| | | | | Sbjct 417756 GTACCATA-GCTTCTGGGCCTTAACCTTCTGGCGACCACGACCTTCTGCCTCATACTTCT 417698 Query 65967 AGTGTATACAATCGTTCGAACTCGTCTCCCCAAACATTGTCCAATCCAGGACATTCATCC 66026 || |||| ||| || || || || | |||| | | | || || || ||| Sbjct 417697 CGT----ACAAGGCTTCAAATTCATCACCGTACACATCGGCAAGACCCGGGCACTCACTA 417642 Query 66027 GGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATC 66086 || ||||| | | ||| || |||| | || || || ||||| || ||||| |||||| Sbjct 417641 GGGCACATGAGGGTCCATTCGCCGTTCTTCTCAACACGCTTCATGAAAAGATCGGGAATC 417582 Query 66087 CAAAGAGCTATAAATAAATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGA 66146 || ||||| | || | ||| | | | || || || || ||||| |||| Sbjct 417581 CAGAGAGCAAGGAAAAGATCGCGAGCACGGACCTCTTCTTTACCGTGGTTCTTGCGAAGA 417522 Query 66147 TCGAGGAACGCCATAATATCATAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGC 66206 || |||||| | | | ||| | ||||| ||||| | || || || | | || ||| Sbjct 417521 TCAAGGAACTCGAAGACATCCTGGTGCCAGGGTTCGAGATAGATAGCAAAGGCACCGGGC 417462 Query 66207 CGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGA 66266 | ||||| || ||||| || | |||||| |||||||| || |||||| |||||| || Sbjct 417461 CTCTTGTTACCACCCTGGTCAACGTATCTGGCGGTGTTGTTGAAAACTCGCAACATGGGT 417402 Query 66267 ATAATACCATTGGATGTACCATTGGTCCCGGAGATATAGCTTCCACTTGCACGAATATTA 66326 | |||||||| || |||||||| || |||| ||| || ||| | ||||| || Sbjct 417401 ACGATACCATTAGAGGTACCATTCGTACCGGCGATGTATGAGCCAGTGGCACGGATGCGG 417342 Query 66327 CTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTA 66386 ||| ||||| || || || || | || ||||| | || || || | || Sbjct 417341 TGAATGTTGAGACCGATACCTCCAGCTGTCTTGGAGATCATGGCACAGGTCTTGAGTGTG 417282 Query 66387 TCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGG 66446 || ||||||||||| ||||| || ||| |||||| | || || ||| | || || Sbjct 417281 TCGTAGATGCCCTCAATACTGTCTTCCTTCATGTCGACTAAGAAGCAGGATGCCAGCTG- 417223 Query 66447 TGACGACT----AGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTC 66502 || || ||||| ||||| || | |||||||||||||| || || |||| Sbjct 417222 ---CGCCTGGGGTGTTCCAGCATTGAAAAGAGTAGGAGAAGCGTGGGTGAAATATTTGCT 417166 Query 66503 AGAAAGTAGATTGTACGTCTCAATAGCTGAGTCTA---TATC-CCATTGATGAATTCCTA 66558 || | || ||||| |||| ||| || |||| |||| || |||| || | Sbjct 417165 GGACATAAGGTTGTAGGTCTGAATGACTTTCTCTACATTATCGCCCCAGATG----CCAA 417110 Query 66559 CTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAACA 66618 | || |||||||| | ||||||||| |||||||| |||||||| | || | || | | Sbjct 417109 CAGCCACACGCATGATCATGTGCTGTGGTCTTTCTACGATCTTCTCATTGAGCTTTAGTA 417050 Query 66619 AGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAA 66678 || || | ||||| || || || ||||| || | ||| |||||||| ||||| | Sbjct 417049 GATAAGACCTCTCCAAGGTCTTGAAGCCAAAGTATTGGTAGTTGAAGTCTCGGTCGTAGA 416990 Query 66679 TAATAACCGAGTTGAGTTTATCCTTATATTTGTTAACTACATCCATGGTAATACTT-GAA 66737 ||| | |||| | | ||||| | | | | || |||| | | | ||| || Sbjct 416989 CAATTGCGGAGTCAAAGTCCTCCTTGTGTCTCATGAC-ACATTCGTATGTCTCCTTGGAG 416931 Query 66738 ATAATCGGAGAATGTTTCCCATTTTTAGGATTGACATAGTTGAATAAATCCTCCATCACT 66797 || || ||||| | ||| || ||||| || ||||||| | | | ||| || || Sbjct 416930 ATCATAGGAGAGGGCTTCATGTTCTTAGGGTTAACATAGTGGTAGAGATCGCTAATGACA 416871 Query 66798 TCACTAAATAGtttttttGTTTCTTTGTGTAGATTTGATACGGCTATTCTAGCGGCTATA 66857 | || | || || |||| ||||| || || || ||||| || | ||||| | Sbjct 416870 GAAGACCATTGCTTCTTCGTTTGCTTGTGGAGGTTGGACACGGCAATACGTGCGGCAAGG 416811 Query 66858 ATGGCATAATCCGGATG 66874 || ||||||||||| || Sbjct 416810 ATAGCATAATCCGGGTG 416794 >seq1 Length=2525816 Score = 96.9 bits (106), Expect = 5e-15 Identities = 147/209 (70%), Gaps = 3/209 (1%) Strand=Plus/Plus Query 36158 CATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGT 36217 || ||||| || |||||||||||| || | | || | |||||||| || ||||| Sbjct 592368 CAAGCGAAGTCAGTGTGTAGACCCTCATCACGAGAGATGAGCTCGTTGGAGAAGGTGAGA 592427 Query 36218 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAA 36277 |||||||| || |||||||| || | ||| || ||||| || |||| ||| ||||| Sbjct 592428 CCGGGCATCAGACCACGCTTCTTCAACCAGAAGATGGAGGCGAATGCACCACTGAAGAAG 592487 Query 36278 ATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGG---CACTGTCATGT 36334 || || || || || || |||||||| || | || || | || ||||| Sbjct 592488 ATACCCTCGACAGCAGCGAAGGCAATGAGACGCTGAGCAAAGGTGGAGTTCTTGTCAGAA 592547 Query 36335 ATCCACTTTTGAGCCCAATCGGCCTTCTT 36363 ||||| | ||||||| ||||||||||| Sbjct 592548 ATCCATTGCAGAGCCCAGTCGGCCTTCTT 592576 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 658169525590320