Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Daldinia_20sp._20EC12_20[genbank_20GCA_5F002120325.1_202017-05-11] 398 sequences; 37,551,009 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq10 244 2e-59 seq1 105 1e-17 >seq10 Length=1071462 Score = 244 bits (270), Expect = 2e-59 Identities = 1286/2033 (63%), Gaps = 45/2033 (2%) Strand=Plus/Minus Query 78748 GTACGTAGATAGTACATTCCCGTTTTTAGACCGAGACTCCATCCGTAGAAATGCATACTC 78807 ||||| ||||||||||| || || || ||||| || |||| ||| ||||||||| || Sbjct 418808 GTACGGAGATAGTACATGCCAGTCTTCAGACCAAGCTTCCAGCCGGTGAAATGCATGCTG 418749 Query 78808 GTTAGTTTGGAATAACTCGGATCTGCTATATGGATATTCATAGATTGACTTTGATCGATG 78867 || | ||| | | || ||| || || || || | || || |||||||| Sbjct 418748 GTAATCTTGCCCATAGTGGGCTCTCTCATGTGAATGTTTAGTGACTGGGATTGATCGACA 418689 Query 78868 AAGGCTCCCCTGTCTGCAGCCATTTTTATGATCGTCTTTTGTGGAATTTCCCAAATAGTT 78927 ||||| || | ||| || ||||| | | ||| || || | |||||||||| || Sbjct 418688 AAGGCACCACGGTCAGCGGCCATCTGGACGATGGTTCGCTGAGAGATTTCCCAAACGGTC 418629 Query 78928 TTATAAACTCGCTTAATATCTTCTGGAAGGTTTGTA---TTCTGAATGGATCCACCATCT 78984 || |||| || | || |||| ||||| | |||||||| || ||||| || Sbjct 418628 TTGTAAAGAGCTTTGAGGTCCGAAGGAATGTTTGGAATGTTCTGAATTGAACCACCTTCG 418569 Query 78985 GCCATAATCCTATTCTTGATCTCTTCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGG 79044 || || || | ||||| || ||| ||| | | || | || | || Sbjct 418568 GCAATGATGCGGTTCTTCATGCTGTCAGACCAGAGACCCATGTCAACAAGGTCTTTGAGC 418509 Query 79045 AGATGCGGATTAACTACTTGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTG 79104 | || ||||| ||||| || || |||| | || | |||| ||| || || Sbjct 418508 AACCAAGGGTTAACAACTTGGAACTCGCCAGCAAGGACACGACGAGAGTAGATGTTCGAC 418449 Query 79105 GTATATGGTTCCACCGATTCATTATTTCCCAAAATTTGAGCAGTTGATGCCGTTGGCATA 79164 || || || || | |||| || || |||| ||| || | ||| || || |||||| Sbjct 418448 GTGTAGGGCTCGAAGCATTCGTTGTTACCCAGAATCTGGGAAGTGCTAGCAGTGGGCATA 418389 Query 79165 GGTGCCACCAATAAACTATTTCTAAGACCGTATGATCTGATTTTATCTTTTAGAGATTCC 79224 || || || || || || |||| | ||| | | |||||| || || || || Sbjct 418388 GGAGCAACTAACAAGCTGTTTCGTACACCATGTTGCTTGATTTGCTCCTTAAGGCTAGCC 418329 Query 79225 CAATCCCAAAGATCAGACGGGACAACATTCCAAAGATCATATTGTAGAATACCGTTACTA 79284 |||||||| |||||| ||| |||||||| | || ||||| || ||||| | | | Sbjct 418328 CAATCCCAGAGATCACTGGGGGTGACATTCCACATGTCGTATTGGAGGATACCCTGAGAA 418269 Query 79285 GCGTATGATCCTGTGTATGTTTCATAAGGTCCTTCCTTTTCGGCTAATTCACAACTC--G 79342 | || ||| ||| || || | || || | ||| | || | || | Sbjct 418268 ACAGGAGAGCCTTCGTAAGTCGAGTAGGTACCCTCGACCTTGGCGA--TCTCCACGGAGG 418211 Query 79343 CCTCTAATGCTCCGTAATAAATGGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCTA 79402 | || || | | ||||| || |||||||||| ||| || | | | ||||| Sbjct 418210 CAGTTAGAGCAGCATGGTAAATAGTCTCGAAAATCTGCTTGTTCAACTGTCTGGCTTCCG 418151 Query 79403 GGCTATCAAATGG-ATAATTTAAGAGAATAAACGCGTCTGCTAATCCTTGAACACCAATA 79461 | |||||||| ||| | | || || | |||||| | || |||||||| | | Sbjct 418150 GAGACTCAAATGGCATACGTAGTGCTAAGAAG-GTGTCTGCAAGACCCTGAACACCTAGA 418092 Query 79462 CCGATAGGTCTATGTCTCTTATTAGAAATTTCA-GCTTCTGGAATAGGATAATAATTAAT 79520 |||||||| | || | | | || | || | || || |||| || || || || | Sbjct 418091 CCGATAGGACGGTGGCGCATGTT-GCTGTTGCGTGCCTCAGGAACGGGGTAGTAGTTGAC 418033 Query 79521 ATCTATAATTTTATTGAGATTCCTGACTATTACTTTGACCACATCCTTTAGTTTGAGAAA 79580 ||| || || | || || || | | || | | || || | || || | || Sbjct 418032 ATCGATGGTTCTGTTCAGGTTGTGGGTGACGACCTGGGTAACTTCGTGCAGCTTTTGGAA 417973 Query 79581 ATCAAAT----CGTCCATCTATTACAAACATGTT--CAACGCGACAGATGCCAGATTACA 79634 ||| | ||| | || | | ||| || || | ||| |||| || || Sbjct 417972 GTCATAGGTACCGTTGTTGTAGTCAACGAATGACGGCAGTGCAAGAGACGCCAAGTTGCA 417913 Query 79635 AACGGCTACCTCATTAGCATCCGCATATTGTATTATTTCAGTGCAGAGGTTACTACACTT 79694 ||||||||||||| | | ||| || | || ||||||||||| | ||| || Sbjct 417912 GACGGCTACCTCATCGGGAGCCGAGTACTCGATAATTTCAGTGCACAAGTTGGAACTGCG 417853 Query 79695 AATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAA 79754 ||| ||||| | || | || || ||||| |||||| |||||| ||||| ||||| Sbjct 417852 AATAGTTCCAAGGTTCTTCTGGTTGCTCTTGCGGTTACAGTGATCCTTGTAAAGCATGAA 417793 Query 79755 CGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTC-GAGCCTTTA 79813 ||| | || || || |||| | || | ||| || | ||| | | || | ||||| | Sbjct 417792 GGGATTTCCGGTCTCGGTCTGGGCCTCCAGAATGGCGTACCATA-GCTTCTGGGCCTTAA 417734 Query 79814 --TTATAG--ACTTGTATCTCTTTTCTCTTTCGTATTGTGTATATAATCGTTCGAACTCG 79869 || | | || | || | ||| | | | | || | || ||| || || Sbjct 417733 CCTTCTGGCGACCACGACCTTCTGCCTCATACTTCTCGT----ACAAGGCTTCAAATTCA 417678 Query 79870 TCTCCCCAAACATCGTCTAATCCAGGACATTCGTCAGGACACATCAACGACCACTCTCCA 79929 || || | |||||| | | || || || || ||| ||||| | | ||| || || Sbjct 417677 TCACCGTACACATCGGCAAGACCCGGGCACTCACTAGGGCACATGAGGGTCCATTCGCCG 417618 Query 79930 TCATCCTTTACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTG 79989 | | || || || ||||| || ||||| |||||||| ||||| | || ||||| | Sbjct 417617 TTCTTCTCAACACGCTTCATGAAAAGATCGGGAATCCAGAGAGCAAGGAAAAGATCGCGA 417558 Query 79990 GTTCTATGCTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAA 80049 | | ||| || || || ||||| |||||| |||||| | | | ||| Sbjct 417557 GCACGGACCTCTTCTTTACCGTGGTTCTTGCGAAGATCAAGGAACTCGAAGACATCCTGG 417498 Query 80050 TGCCACGGTTCCAAGTATATGGCCATAACTCCCGGTCGTTTGTTTCCTCCCTGATCTATG 80109 ||||| ||||| | || || || | | || || | ||||| || ||||| || | | Sbjct 417497 TGCCAGGGTTCGAGATAGATAGCAAAGGCACCGGGCCTCTTGTTACCACCCTGGTCAACG 417438 Query 80110 TATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGTACCATTG 80169 ||||| |||||||| || |||||| |||||| || | |||||||| || |||||||| Sbjct 417437 TATCTGGCGGTGTTGTTGAAAACTCGCAACATGGGTACGATACCATTAGAGGTACCATTC 417378 Query 80170 GTCCCGGAGATATAGCTTCCACTGGCACGAATATTACTAATTGATAGACCTATTCCCCCT 80229 || |||| ||| || ||| ||||||| || ||| ||||| || || || Sbjct 417377 GTACCGGCGATGTATGAGCCAGTGGCACGGATGCGGTGAATGTTGAGACCGATACCTCCA 417318 Query 80230 GCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATGCTATCA 80289 || | || ||||| | || || || | || || ||||||||||| || || || Sbjct 417317 GCTGTCTTGGAGATCATGGCACAGGTCTTGAGTGTGTCGTAGATGCCCTCAATACTGTCT 417258 Query 80290 TCAATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACT----AGTTCCCGCATT 80345 || |||||| | || || ||| | || || || || ||||| ||||| Sbjct 417257 TCCTTCATGTCGACTAAGAAGCAGGATGCCAGCTG----CGCCTGGGGTGTTCCAGCATT 417202 Query 80346 AAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGACAGTAGATTGTACGTCTCAAT 80405 || | |||||||||||||| || || |||| |||| || ||||| |||| ||| Sbjct 417201 GAAAAGAGTAGGAGAAGCGTGGGTGAAATATTTGCTGGACATAAGGTTGTAGGTCTGAAT 417142 Query 80406 AGCTGATTCTA---TATC-CCATTGATGAATTCCTACCGCGACACGCATTAACATGTGCT 80461 || |||| |||| || |||| || || || |||||||| | |||||||| Sbjct 417141 GACTTTCTCTACATTATCGCCCCAGATG----CCAACAGCCACACGCATGATCATGTGCT 417086 Query 80462 GAGGTCTTTCAACGATCTTGTTATTTATTTTCAACAAGTAAGATTTTTCCAAAGTTTTAA 80521 | |||||||| |||||||| | ||| | || | | ||||| | ||||| || || | Sbjct 417085 GTGGTCTTTCTACGATCTTCTCATTGAGCTTTAGTAGATAAGACCTCTCCAAGGTCTTGA 417026 Query 80522 AACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAGTTTATCCT 80581 | ||||| || | ||| |||||||| ||||| | ||| | |||| | | |||| Sbjct 417025 AGCCAAAGTATTGGTAGTTGAAGTCTCGGTCGTAGACAATTGCGGAGTCAAAGTCCTCCT 416966 Query 80582 TATATTTGTTAACTACATCCATGGTGATACTT-GAAATAATCGGAGAATGTTTCCCATTT 80640 | | | | | || |||| | | | ||| || || || ||||| | ||| || Sbjct 416965 TGTGTCTCATGAC-ACATTCGTATGTCTCCTTGGAGATCATAGGAGAGGGCTTCATGTTC 416907 Query 80641 TTAGGATTAACATAGTTGAATAAATCCTCCATCACTTCACTAAATAGtttttttGTTTCC 80700 ||||| |||||||||| | | | ||| || || | || | || || |||| | Sbjct 416906 TTAGGGTTAACATAGTGGTAGAGATCGCTAATGACAGAAGACCATTGCTTCTTCGTTTGC 416847 Query 80701 TTGTGTAGATTTGATACGGCTATTCTGGCGGCTAAAATGGCATAATCTGGATG 80753 ||||| || || || ||||| || | ||||| | || |||||||| || || Sbjct 416846 TTGTGGAGGTTGGACACGGCAATACGTGCGGCAAGGATAGCATAATCCGGGTG 416794 >seq1 Length=2525816 Score = 105 bits (116), Expect = 1e-17 Identities = 149/209 (71%), Gaps = 3/209 (1%) Strand=Plus/Plus Query 49960 CATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGT 50019 || ||||| || ||| |||||||| || | | || || |||||||| || ||||| Sbjct 592368 CAAGCGAAGTCAGTGTGTAGACCCTCATCACGAGAGATGAGCTCGTTGGAGAAGGTGAGA 592427 Query 50020 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGACCCAGAAAAGAAG 50079 |||||||| || |||||||| || | ||| || ||||| || |||| ||| |||||| Sbjct 592428 CCGGGCATCAGACCACGCTTCTTCAACCAGAAGATGGAGGCGAATGCACCACTGAAGAAG 592487 Query 50080 ATTCCTTCTACTGCGGCAAAGGCAACAAGTCTCTCTCCATAACTGGCGCT---GTCATGT 50136 || || || || || || ||||||| || | || || | ||| | | |||| Sbjct 592488 ATACCCTCGACAGCAGCGAAGGCAATGAGACGCTGAGCAAAGGTGGAGTTCTTGTCAGAA 592547 Query 50137 ATCCACTTTTGAGCCCAATCGGCCTTCTT 50165 ||||| | ||||||| ||||||||||| Sbjct 592548 ATCCATTGCAGAGCCCAGTCGGCCTTCTT 592576 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 718265226612720