Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Daldinia_20sp._20EC12_20[genbank_20GCA_5F002120325.1_202017-05-11] 398 sequences; 37,551,009 total letters Query= NC_004062.1 Length=119217 Score E Sequences producing significant alignments: (Bits) Value seq39 89.7 4e-13 >seq39 Length=331608 Score = 89.7 bits (98), Expect = 4e-13 Identities = 158/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 42883 CCTCCACGCAGTCTTAACACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGAC 42942 || ||||| || | | ||| | |||| ||||||||||| || | ||||| ||||| Sbjct 20983 CCACCACGTAGGCGGAGCACAAGGTGGAGGGTGCTCTCCTTCTGGATGTTGTAGTCGGAG 20924 Query 42943 AATGTACGTTCGTCGTCCAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGGC 43002 | || || |||| || | || |||||||| || || ||||||||||| |||| || Sbjct 20923 AGGGTTCGGCCGTCTTCGAGCTGCTTGCCGGCGAAGATTAATCGCTGTTGGTCGGGGGGG 20864 Query 43003 ACACCTTCTTTTTCGCTG-ATCAACTCTTTGACTCTGCCAACTGTGTCGCCAGCCTCGAC 43061 | || || || || ||| ||| ||||| || | | ||||||| || ||| || Sbjct 20863 ATTCCCTCCTTGTC-CTGAATCTTGGACTTGACATTGTCGATAGTGTCGCTAGACTCCAC 20805 Query 43062 GTCTACCGTTATAGTTTTTCCGGTTAGAGTTTTCACAAAAATTTGCAT 43109 || | || ||||| || || || || || || || ||||| ||||| Sbjct 20804 CTCAAGGGTGATAGTCTTACCCGTGAGGGTCTTGACGAAAATCTGCAT 20757 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 381367750119084