Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Daldinia_20sp._20EC12_20[genbank_20GCA_5F002120325.1_202017-05-11] 398 sequences; 37,551,009 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq1 120 5e-22 seq10 96.9 5e-15 >seq1 Length=2525816 Score = 120 bits (132), Expect = 5e-22 Identities = 236/339 (70%), Gaps = 14/339 (4%) Strand=Plus/Minus Query 125019 ATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTTGGACGGTCGAAGAGGTCGATCTG 125078 || ||| |||||||||| ||| | || ||||| ||||| | |||||| |||| ||| Sbjct 592982 ATCTGGCAAATGTACAAGAAGCACGAAGCATCCTTCTGGACTGCTGAAGAGATCGACCTG 592923 Query 125079 TCCAAGGACCTGTACGATTGGGAGACTCGTTTGACTGAAACTGAGCGAGA----GTTTAT 125134 |||||||| || |||| ||| | | || | | ||| ||| ||||| ||| | Sbjct 592922 TCCAAGGATCTTCACGACTGGAACAACCGACTCAATGA---TGA-CGAGAAGTTCTTTGT 592867 Query 125135 ATCGCACATTTTGGCCTTCTTTGCCGGCTCCGATGGAATCGTCAACGACAATCT-GTTGA 125193 || |||||| | ||||||||||||| || || || || ||||| || || || ||||| Sbjct 592866 TTCTCACATTCTTGCCTTCTTTGCCGCGTCGGACGGCATTGTCAATGAGAACCTAGTTGA 592807 Query 125194 CACGA-TTCTCTCAAGAGTTGACCATTCCAGAGGTGTCGTGCTTTTACGGATTCCAAATC 125252 ||| || | |||| | || || |||| | ||||| ||||| ||||| ||| Sbjct 592806 -GCGATTTAGCGGCGAAGTTCA-GATCCCTGAGGCGCGATGCTTCTACGGTTTCCAGATC 592749 Query 125253 ATGATTGAGAACGTGCACTCGGAAATGTACTCTACACTGATTGACATGTACATTCGCGA- 125311 ||||| |||||| | ||||| || | ||||| || ||||||| ||||| || Sbjct 592748 ATGATGGAGAACATCCACTCCGAGACTTACTCCCTGCTCATTGACACCTACATCAAGGAG 592689 Query 125312 TCCGCAACGTAAACACATGCTCTTTAACGCAATCGACAC 125350 |||| | | || ||| ||||| ||||| || ||||| Sbjct 592688 CCCGCCCAGAAGACCCAT-CTCTTCAACGCTATTGACAC 592651 >seq10 Length=1071462 Score = 96.9 bits (106), Expect = 5e-15 Identities = 310/473 (66%), Gaps = 6/473 (1%) Strand=Plus/Plus Query 96865 GATACGTTACACAGGGCGGCAATAAACGGCCAGGCGCTATAGCCGTCTACTTGGAACCTT 96924 |||||||| ||||| || || || |||| || || | || |||| | ||||| | Sbjct 417434 GATACGTTGACCAGGGTGGTAACAAGAGGCCCGGTGCCTTTGCTATCTATCTCGAACCCT 417493 Query 96925 GGCACGCGGACGTTTTTGACTTTATCGAGATGCGCAAAAACTCTGGCTTTGAAGAGGCAC 96984 ||||| ||| || || || || | || | ||||| ||| || ||||||| | Sbjct 417494 GGCACCAGGATGTCTTCGAGTTCCTTGATCTTCGCAAGAACCACGGTAAAGAAGAGGTCC 417553 Query 96985 GAGCCAGGGACTTGTTTTATGCACTCTGGGTGCCAGATTTGTTCATGAAGCGCGTCAACG 97044 | || | || | || ||| |||||| | || ||| | ||||||||||| || | Sbjct 417554 GTGCTCGCGATCTTTTCCTTGCTCTCTGGATTCCCGATCTTTTCATGAAGCGTGTTGAGA 417613 Query 97045 ACGGTGGCTACTGGAGCCTAATGTGCCCCGACTCGTCACCCGGTCTGTCCGATTGCTGGG 97104 | ||| | |||| ||| |||||||| || || ||||| ||||| | | Sbjct 417614 AGAACGGCGAATGGACCCTCATGTGCCCTAGTGAGTGCCCGGGTCTTGCCGATGTGTACG 417673 Query 97105 GCGAAGAGTTTGAGGCCAAGTACACGGCCTACGAGCAAGAGGGCCG-ATACGTGAGACGA 97163 | || || ||||| ||| |||| | || ||| ||| || || || ||| | Sbjct 417674 GTGATGAATTTGAAGCCTTGTACGAGAAGTATGAGGCAGAAGGTCGTGGTCGCCAGAAG- 417732 Query 97164 GTCGATGCACGAGAA-CTGTGGAAGGCCATCGTGACGGCTCAGGTAGAGACTGGAACTCC 97222 || | || | |||| || ||| | ||||| || ||| ||| ||||| |||| ||| Sbjct 417733 GTTAAGGC-CCAGAAGCTATGGTACGCCATTCTGGAGGCCCAGACCGAGACCGGAAATCC 417791 Query 97223 GTACATTCTCTACAAGGAT-ACCGTGAATCGCAACAGCAACCAACGCCACTTGGGCACCA 97281 | ||| || ||||||||| || || || ||||| |||||||| || | || || | Sbjct 417792 CTTCATGCTTTACAAGGATCACTGT-AACCGCAAGAGCAACCAGAAGAACCTTGGAACTA 417850 Query 97282 TCAAGGGCTCCAATCTGTGCACGGAAATTGTAGAGTACGCCTCTCCGGACGAG 97334 | | ||||| ||||||| |||||| | |||||| | |||| || ||| Sbjct 417851 TTCGCAGTTCCAACTTGTGCACTGAAATTATCGAGTACTCGGCTCCCGATGAG 417903 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 741055513230480