Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Daldinia_20sp._20EC12_20[genbank_20GCA_5F002120325.1_202017-05-11] 398 sequences; 37,551,009 total letters Query= NC_005309.1 Length=359853 Score E Sequences producing significant alignments: (Bits) Value seq16 154 3e-32 seq39 129 1e-24 >seq16 Length=747318 Score = 154 bits (170), Expect = 3e-32 Identities = 175/235 (74%), Gaps = 0/235 (0%) Strand=Plus/Minus Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389 || || || | ||| | ||| || ||||| | || || || |||||||| || ||||| Sbjct 127612 ATGCCACCACGTAGACGAAGGACGAGATGGAGGGTGGACTCCTTCTGAATGTTGTAGTCG 127553 Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449 ||||| | |||||| || ||||| |||||||| ||||| | | ||| || |||||| Sbjct 127552 CTCAGAGTGCGACCGTCCTCGAGTTGCTTTCCAGCGAAAATCAATCGCTGCTGGTCAGGA 127493 Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCT 104509 || || ||||| |||||||||||||| | ||| ||||| || | ||| ||| | || Sbjct 127492 GGAATGCCTTCCTTATCCTGAATCTTCGATTTGACATTGTCGATGGTGTCGGAGGACTCC 127433 Query 104510 ACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCATTTTGT 104564 ||||| || || || ||||| ||||| || || || || || |||||||| |||| Sbjct 127432 ACCTCAAGGGTGATGGTCTTGCCAGTGAGGGTCTTGACGAAGATCTGCATGTTGT 127378 Score = 125 bits (138), Expect = 2e-23 Identities = 168/231 (73%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389 ||||| || | ||| | || || ||||| | |||||||| ||||| ||||| ||||| Sbjct 128131 ATTCCACCACGTAGTCGGAGAACGAGATGAAGGGTAGATTCCTTCTGGATATTGTAGTCG 128072 Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449 || |||| |||||||| || || || || ||||| || || | |||||| || || Sbjct 128071 CTGAGGGTTCGGCCGTCTTCCAGCTGCTTACCCGCAAAGATAAGTCGCTGTTGGTCGGGG 128012 Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCT-TTTACATTTTCTACGGTATCGCTAGGTTC 104508 || || || || || ||||||||| ||||| || ||||| || | ||| || | || Sbjct 128011 GGAATACCCTCCTTGTCCTGAATC-TTGCTCTTCACATTATCGATGGTGTCTGACGACTC 127953 Query 104509 TACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 ||||||| || || ||||| || || || || || ||||| |||||||| Sbjct 127952 GACCTCTAAGGTGATGGTCTTGCCGGTCAGAGTCTTCACAAAGATCTGCAT 127902 >seq39 Length=331608 Score = 129 bits (142), Expect = 1e-24 Identities = 143/191 (75%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 104369 TCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAA 104428 || ||||| || || ||||| || || |||| |||||||| || || || || || || Sbjct 20947 TCCTTCTGGATGTTGTAGTCGGAGAGGGTTCGGCCGTCTTCGAGCTGCTTGCCGGCGAAG 20888 Query 104429 ATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTT 104488 |||| | |||||| || || || ||||| || || ||||||||||| | || ||||| Sbjct 20887 ATTAATCGCTGTTGGTCGGGGGGGATTCCCTCCTTGTCCTGAATCTTGGACTTGACATTG 20828 Query 104489 TCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACA 104548 || | || ||||||| || ||||| || || ||||||||||| || || || || || Sbjct 20827 TCGATAGTGTCGCTAGACTCCACCTCAAGGGTGATAGTCTTACCCGTGAGGGTCTTGACG 20768 Query 104549 AATATCTGCAT 104559 || |||||||| Sbjct 20767 AAAATCTGCAT 20757 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1151392528587784