Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Daldinia_20sp._20EC12_20[genbank_20GCA_5F002120325.1_202017-05-11] 398 sequences; 37,551,009 total letters Query= NC_005839.2 Length=131680 Score E Sequences producing significant alignments: (Bits) Value seq39 96.9 3e-15 seq16 89.7 4e-13 >seq39 Length=331608 Score = 96.9 bits (106), Expect = 3e-15 Identities = 143/203 (70%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 48524 TGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCGTCCTCCAGCTGC 48583 || || ||||||||||| || |||||||| || | | ||| |||| || |||||| Sbjct 20959 TGGAGGGTGCTCTCCTTCTGGATGTTGTAGTCGGAGAGGGTTCGGCCGTCTTCGAGCTGC 20900 Query 48584 TTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATAATTTTC 48643 || ||| || | ||||| ||||| || || || | | ||||||||| ||| || Sbjct 20899 TTGCCGGCGAAGATTAATCGCTGTTGGTCGGGGGGGATTCCCTCCTTGTCCTGAATCTTG 20840 Query 48644 TGCTTGATAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTTACCGGTG 48703 ||||| | | || || ||| |||||||| ||| | || || || ||||| ||| Sbjct 20839 GACTTGACATTGTCGATAGTGTCGCTAGACTCCACCTCAAGGGTGATAGTCTTACCCGTG 20780 Query 48704 AGAGTTTTCACAAAAATCTGCAT 48726 || || || || ||||||||||| Sbjct 20779 AGGGTCTTGACGAAAATCTGCAT 20757 >seq16 Length=747318 Score = 89.7 bits (98), Expect = 4e-13 Identities = 148/211 (70%), Gaps = 2/211 (1%) Strand=Plus/Minus Query 48523 ATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCA-ATTGTCGCTCGTCCTCCAGCT 48581 ||| || ||| |||||| ||||||||||| || || | || || ||||||| || | Sbjct 127586 ATGGAGGGTGGACTCCTTCTGAATGTTGTAGTCGCTCAGAGTG-CGACCGTCCTCGAGTT 127528 Query 48582 GCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATAATTT 48641 |||| || || |||| || |||||||| || || | | |||||| ||| ||| | Sbjct 127527 GCTTTCCAGCGAAAATCAATCGCTGCTGGTCAGGAGGAATGCCTTCCTTATCCTGAATCT 127468 Query 48642 TCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTTACCGG 48701 || |||| | | ||||| |||| |||||| ||| | || ||||| || || | Sbjct 127467 TCGATTTGACATTGTCGATGGTGTCGGAGGACTCCACCTCAAGGGTGATGGTCTTGCCAG 127408 Query 48702 TGAGAGTTTTCACAAAAATCTGCATCGTGTC 48732 |||| || || || || |||||||| |||| Sbjct 127407 TGAGGGTCTTGACGAAGATCTGCATGTTGTC 127377 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 421249156668398