Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Daldinia_20sp._20EC12_20[genbank_20GCA_5F002120325.1_202017-05-11] 398 sequences; 37,551,009 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq15 114 2e-21 seq1 109 9e-20 >seq15 Length=888612 Score = 114 bits (126), Expect = 2e-21 Identities = 87/100 (87%), Gaps = 2/100 (2%) Strand=Plus/Plus Query 16432 CGCTAAGCGTCATCGC-AGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTA 16490 ||| |||||||||||| |||| |||||| || |||||||| || || |||||||| |||| Sbjct 555792 CGCCAAGCGTCATCGCAAGAT-TCTTCGTGACAACATCCAGGGTATTACCAAGCCCGCTA 555850 Query 16491 TCCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTC 16530 |||| ||||| |||||||||||||| ||||||||| |||| Sbjct 555851 TCCGACGTCTCGCTCGTCGTGGTGGTGTCAAGCGTATCTC 555890 >seq1 Length=2525816 Score = 109 bits (120), Expect = 9e-20 Identities = 85/99 (86%), Gaps = 2/99 (2%) Strand=Plus/Plus Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 || ||||| || || | ||| ||||||||| |||||||| || ||||||||||| ||||| Sbjct 1418480 GCCAAGCGCCACCGTAAGAT-TCTTCGAGACAACATCCAGGGTATCACCAAGCCCGCTAT 1418538 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTC 16530 ||| ||||| |||||||||||||| ||||||||| |||| Sbjct 1418539 CCGACGTCTCGCTCGTCGTGGTGGTGTCAAGCGTATCTC 1418577 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79074836105814