Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Daldinia_20sp._20EC12_20[genbank_20GCA_5F002120325.1_202017-05-11] 398 sequences; 37,551,009 total letters Query= NC_006998.1 Length=194711 Score E Sequences producing significant alignments: (Bits) Value seq10 230 3e-55 seq1 114 2e-20 >seq10 Length=1071462 Score = 230 bits (254), Expect = 3e-55 Identities = 749/1153 (65%), Gaps = 28/1153 (2%) Strand=Plus/Minus Query 62892 GCAACAGATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCATATTGTATTATCTCA 62951 |||| ||| |||| || || ||||||||||||| | | ||| || | || || ||| Sbjct 417932 GCAAGAGACGCCAAGTTGCAGACGGCTACCTCATCGGGAGCCGAGTACTCGATAATTTCA 417873 Query 62952 GTGCAAAGATTACTACACTTGATAGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACAC 63011 ||||| | || || |||||||| | || | || || ||||| |||||| Sbjct 417872 GTGCACAAGTTGGAACTGCGAATAGTTCCAAGGTTCTTCTGGTTGCTCTTGCGGTTACAG 417813 Query 63012 GCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTC 63071 |||||| ||||| ||||| ||| | || || || |||| | || | ||| || | | Sbjct 417812 TGATCCTTGTAAAGCATGAAGGGATTTCCGGTCTCGGTCTGGGCCTCCAGAATGGCGTAC 417753 Query 63072 CAGACGACTC-GAGCCTTTA--TTATAG--ATTTGTATCTCCTTTCTCTTTCGTATAGTG 63126 || | | || | ||||| | || | | | | || || ||| | | | | || Sbjct 417752 CATA-GCTTCTGGGCCTTAACCTTCTGGCGACCACGACCTTCTGCCTCATACTTCTCGT- 417695 Query 63127 TATACAATCGTTCGAACTCGTCTCCCCAAACATTGTCCAATCCAGGACATTCATCCGGAC 63186 |||| ||| || || || || | |||| | | | || || || ||| || | Sbjct 417694 ---ACAAGGCTTCAAATTCATCACCGTACACATCGGCAAGACCCGGGCACTCACTAGGGC 417638 Query 63187 ACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAA 63246 |||| | | ||| || |||| | || || || ||||| || ||||| |||||||| | Sbjct 417637 ACATGAGGGTCCATTCGCCGTTCTTCTCAACACGCTTCATGAAAAGATCGGGAATCCAGA 417578 Query 63247 GAGCTATAAATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGA 63306 |||| | || ||||| | | | || || || || ||||| |||||| | Sbjct 417577 GAGCAAGGAAAAGATCGCGAGCACGGACCTCTTCTTTACCGTGGTTCTTGCGAAGATCAA 417518 Query 63307 GGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTT 63366 ||||| | | | ||| ||||| ||||| | || || || | | || |||| | Sbjct 417517 GGAACTCGAAGACATCCTGGTGCCAGGGTTCGAGATAGATAGCAAAGGCACCGGGCCTCT 417458 Query 63367 TGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAA 63426 |||| || ||||| || | |||||| |||||||| || |||||| |||||| || | | Sbjct 417457 TGTTACCACCCTGGTCAACGTATCTGGCGGTGTTGTTGAAAACTCGCAACATGGGTACGA 417398 Query 63427 TACCGTTTGATATACCATTGGTACCGGAGATATAGCTTCCACTGGCACGAATATTACTAA 63486 |||| || || ||||||| ||||||| ||| || ||| ||||||| || || Sbjct 417397 TACCATTAGAGGTACCATTCGTACCGGCGATGTATGAGCCAGTGGCACGGATGCGGTGAA 417338 Query 63487 TTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTGTCAT 63546 | ||||| || || || || | || ||||| | || || || | ||||| | Sbjct 417337 TGTTGAGACCGATACCTCCAGCTGTCTTGGAGATCATGGCACAGGTCTTGAGTGTGTCGT 417278 Query 63547 AGATACCCTCTATGCTATCATCGATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGAC 63606 |||| ||||| || || || || |||||| | || || ||| | || || | Sbjct 417277 AGATGCCCTCAATACTGTCTTCCTTCATGTCGACTAAGAAGCAGGATGCCAGCTG----C 417222 Query 63607 GACTAG----TTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAA 63662 | || | |||| ||||| || | |||||||||||||| || || |||| || Sbjct 417221 GCCTGGGGTGTTCCAGCATTGAAAAGAGTAGGAGAAGCGTGGGTGAAATATTTGCTGGAC 417162 Query 63663 AGTAGATTGTACGTCTCAATAGCTGAGTCTA---TATC-CCATTGATGAATTCCTACTGC 63718 | || ||||| |||| ||| || |||| |||| || |||| || || || Sbjct 417161 ATAAGGTTGTAGGTCTGAATGACTTTCTCTACATTATCGCCCCAGATG----CCAACAGC 417106 Query 63719 GACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAACAAGTA 63778 |||||||| | ||||||||| |||||||| |||||||| | || | || | | || Sbjct 417105 CACACGCATGATCATGTGCTGTGGTCTTTCTACGATCTTCTCATTGAGCTTTAGTAGATA 417046 Query 63779 GGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAAT 63838 || | ||||| || || || ||||| || | ||| |||||||| ||||| | ||| Sbjct 417045 AGACCTCTCCAAGGTCTTGAAGCCAAAGTATTGGTAGTTGAAGTCTCGGTCGTAGACAAT 416986 Query 63839 AACCGAGTTGAGTTTATCCTTATATTTGTTAACTATATCCATGGTGATACTTGAA-ATAA 63897 | |||| | | ||||| | | | | || | || | | | |||| | || | Sbjct 416985 TGCGGAGTCAAAGTCCTCCTTGTGTCTCATGAC-ACATTCGTATGTCTCCTTGGAGATCA 416927 Query 63898 TCGGAGAATGTTTCCCATTTTTAGGATTAACATAGTTGAATAAATCCTCCATCACTTCAC 63957 | ||||| | ||| || ||||| |||||||||| | | | ||| || || | Sbjct 416926 TAGGAGAGGGCTTCATGTTCTTAGGGTTAACATAGTGGTAGAGATCGCTAATGACAGAAG 416867 Query 63958 TAAATAGtttttttGTTTCCTTGTGTAGATTTGATACGGCTATTCTGGCGGCTAGAATGG 64017 || | || || |||| |||||| || || || ||||| || | ||||| || || | Sbjct 416866 ACCATTGCTTCTTCGTTTGCTTGTGGAGGTTGGACACGGCAATACGTGCGGCAAGGATAG 416807 Query 64018 CATAATCCGGATG 64030 |||||||||| || Sbjct 416806 CATAATCCGGGTG 416794 >seq1 Length=2525816 Score = 114 bits (126), Expect = 2e-20 Identities = 151/209 (72%), Gaps = 3/209 (1%) Strand=Plus/Plus Query 33304 CATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGT 33363 || ||||| || ||| |||||||| || | | || || |||||||| || ||||| Sbjct 592368 CAAGCGAAGTCAGTGTGTAGACCCTCATCACGAGAGATGAGCTCGTTGGAGAAGGTGAGA 592427 Query 33364 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCAGAAAAGAAG 33423 |||||||| || |||||||| || | ||| || ||||| ||||||| ||| |||||| Sbjct 592428 CCGGGCATCAGACCACGCTTCTTCAACCAGAAGATGGAGGCGAATGCACCACTGAAGAAG 592487 Query 33424 ATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATAACCGGCGCT---GTCATGT 33480 || || || || ||||| |||||||| || | || || | || | | |||| Sbjct 592488 ATACCCTCGACAGCAGCGAAGGCAATGAGACGCTGAGCAAAGGTGGAGTTCTTGTCAGAA 592547 Query 33481 ATCCACTTTTGAGCCCAATCGGCCTTCTT 33509 ||||| | ||||||| ||||||||||| Sbjct 592548 ATCCATTGCAGAGCCCAGTCGGCCTTCTT 592576 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 622944100837680