Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Daldinia_20sp._20EC12_20[genbank_20GCA_5F002120325.1_202017-05-11] 398 sequences; 37,551,009 total letters Query= NC_007383.1 Length=134394 Score E Sequences producing significant alignments: (Bits) Value seq16 98.7 9e-16 seq24 84.2 2e-11 >seq16 Length=747318 Score = 98.7 bits (108), Expect = 9e-16 Identities = 143/202 (71%), Gaps = 0/202 (0%) Strand=Plus/Plus Query 23986 ACAAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGG 24045 |||| ||||| | || || || || | ||||| || | || ||| | || || ||| Sbjct 127378 ACAACATGCAGATCTTCGTCAAGACCCTCACTGGCAAGACCATCACCCTTGAGGTGGAGT 127437 Query 24046 CCAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCG 24105 || |||||||||||| | |||||| |||||| || || |||||||| ||||| | Sbjct 127438 CCTCCGACACCATCGACAATGTCAAATCGAAGATTCAGGATAAGGAAGGCATTCCTCCTG 127497 Query 24106 ATCAACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATT 24165 | || ||| || |||||| || || ||||||||||| || | | | | ||||| | Sbjct 127498 ACCAGCAGCGATTGATTTTCGCTGGAAAGCAACTCGAGGACGGTCGCACTCTGAGCGACT 127557 Query 24166 ATAACATTCAAAAAGAATCTAC 24187 | |||||||| || || || || Sbjct 127558 ACAACATTCAGAAGGAGTCCAC 127579 Score = 89.7 bits (98), Expect = 4e-13 Identities = 142/204 (70%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 ||||| | ||||| || || | || || || | || ||| | || |||||| | Sbjct 127902 ATGCAGATCTTTGTGAAGACTCTGACCGGCAAGACCATCACCTTAGAGGTCGAGTCGTCA 127961 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 ||||||||||| | || || |||||| ||||| || || || || ||||| ||| Sbjct 127962 GACACCATCGATAATGTGAAGAGCAAGATTCAGGACAAGGAGGGTATTCCCCCCGACCAA 128021 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 ||| |||| || | | || ||||| || ||||| | | ||| | ||||||| || || Sbjct 128022 CAGCGACTTATCTTTGCGGGTAAGCAGCTGGAAGACGGCCGAACCCTCAGCGACTACAAT 128081 Query 24171 ATTCAAAAAGAATCTACAATTCAT 24194 || || || |||||||| ||||| Sbjct 128082 ATCCAGAAGGAATCTACCCTTCAT 128105 >seq24 Length=497866 Score = 84.2 bits (92), Expect = 2e-11 Identities = 115/161 (71%), Gaps = 0/161 (0%) Strand=Plus/Plus Query 24027 ATTACCATCGAAGTCGAGGCCAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGAC 24086 || ||| |||| || ||| | |||||||||||| | ||||| ||||| ||| Sbjct 474078 ATCACCCTCGAGGTGGAGTCTTCCGACACCATCGACAATGTCAAGTCCAAGATCCAGGAC 474137 Query 24087 AAAGAAGGCATACCTCCCGATCAACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGAT 24146 || || || || || ||||| |||||| | ||||| | || ||| ||||| ||||| || Sbjct 474138 AAGGAGGGTATCCCCCCCGACCAACAGCGCCTGATCTTCGCCGGAAAGCAGCTCGAGGAC 474197 Query 24147 GACAGAAACGTCAGCGATTATAACATTCAAAAAGAATCTAC 24187 | | ||| | || ||| || ||||| || || || ||||| Sbjct 474198 GGCCGAACCCTCTCCGACTACAACATCCAGAAGGAGTCTAC 474238 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429933914541690