Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Daldinia_20sp._20EC12_20[genbank_20GCA_5F002120325.1_202017-05-11] 398 sequences; 37,551,009 total letters Query= NC_008035.3 Length=126629 Score E Sequences producing significant alignments: (Bits) Value seq16 102 7e-17 seq39 89.7 4e-13 >seq16 Length=747318 Score = 102 bits (112), Expect = 7e-17 Identities = 161/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 || || ||||| | || || | ||| || || || ||||| || || ||||||||| Sbjct 128128 CCACCACGTAGTCGGAGAACGAGATGAAGGGTAGATTCCTTCTGGATATTGTAGTCGCTG 128069 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828 | |||| | |||| |||| || || |||||| | ||||| ||||||||||| || Sbjct 128068 AGGGTTCGGCCGTCTTCCAGCTGCTTACCCGCAAAGATAAGTCGCTGTTGGTCGGGGGGA 128009 Query 16829 ACGCCCTCTTTGTCGGCAAT-TTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGT 16887 | ||||| ||||| ||| ||||| |||||| | | | ||||| | ||| Sbjct 128008 ATACCCTCCTTGTCCTGAATCTTGCT-CTTCACATTATCGATGGTGTCTGACGACTCGAC 127950 Query 16888 TTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 || | ||||||||| || |||||||| || || ||||| |||||||| Sbjct 127949 CTCTAAGGTGATGGTCTTGCCGGTCAGAGTCTTCACAAAGATCTGCAT 127902 Score = 95.1 bits (104), Expect = 1e-14 Identities = 160/232 (69%), Gaps = 0/232 (0%) Strand=Plus/Minus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 || || ||||| | || || | ||| || ||||||||||| || |||||||||||| | Sbjct 127609 CCACCACGTAGACGAAGGACGAGATGGAGGGTGGACTCCTTCTGAATGTTGTAGTCGCTC 127550 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828 | || ||||||| | ||| || || || |||| | ||||| ||||| ||| Sbjct 127549 AGAGTGCGACCGTCCTCGAGTTGCTTTCCAGCGAAAATCAATCGCTGCTGGTCAGGAGGA 127490 Query 16829 ACGCCCTCTTTGTCGGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTT 16888 | ||| || || || ||| | | || || | | | | |||||| || |||| Sbjct 127489 ATGCCTTCCTTATCCTGAATCTTCGATTTGACATTGTCGATGGTGTCGGAGGACTCCACC 127430 Query 16889 TCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCATTTTGT 16940 || | ||||||||| || || || || || ||||| || |||||||| |||| Sbjct 127429 TCAAGGGTGATGGTCTTGCCAGTGAGGGTCTTGACGAAGATCTGCATGTTGT 127378 Score = 84.2 bits (92), Expect = 2e-11 Identities = 133/191 (70%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 16733 TGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCCTCCAATTGT 16792 || || || |||||||| || ||||||||||||| | |||| | | ||||| | || Sbjct 127876 TGGAGAGTAGACTCCTTCTGAATGTTGTAGTCGGATAGGGTTCGGCCATCCTCAAGCTGC 127817 Query 16793 TTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCGGCAATTTGC 16852 ||||| || |||| | ||||||||||| ||| | ||||| ||||| || | | Sbjct 127816 TTGCCGGCGAAAATCAATCGCTGTTGGTCGGGAGGGATACCCTCCTTGTCTTGGATCTTC 127757 Query 16853 TGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTTTTTCCGGTC 16912 ||| || | | | | ||||| | |||| || | ||||||||| |||||||| Sbjct 127756 GACTTGACGTTGTCGATCGTGTCCGAAGACTCCACCTCGAGGGTGATGGTCTTTCCGGTA 127697 Query 16913 AGCGTTTTGAC 16923 || || ||||| Sbjct 127696 AGGGTCTTGAC 127686 Score = 82.4 bits (90), Expect = 6e-11 Identities = 148/214 (69%), Gaps = 2/214 (1%) Strand=Plus/Minus Query 16724 AGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCC 16783 || |||| |||||||| |||||||| || |||||||||||| | || | | ||| Sbjct 128341 AGCACCAAGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCGCTTAGAGTGCGGCCATCC 128282 Query 16784 TCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGT-C 16842 ||||| || || || || | ||||| || |||||||| || | || || |||| | Sbjct 128281 TCCAACTGCTTACCAGCGAAGATAAGTCGTTGTTGGTCAGGGGGAATACCTTCCTTGTCC 128222 Query 16843 GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGT 16902 | | ||||| ||| || | | | | ||||| | || ||||| ||||| || Sbjct 128221 TGGATCTTGCT-CTTGACGTTGTCAATCGTGTCCGATGATTCAACTTCCAGAGTGATCGT 128163 Query 16903 TTTTCCGGTCAGCGTTTTGACAAAAATCTGCATT 16936 ||||| |||| || ||||| || ||||||||| Sbjct 128162 CTTTCCTGTCAAGGTCTTGACGAAGATCTGCATT 128129 >seq39 Length=331608 Score = 89.7 bits (98), Expect = 4e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 || || ||||| | || || | || || ||| |||||| || ||||||||||||| Sbjct 20983 CCACCACGTAGGCGGAGCACAAGGTGGAGGGTGCTCTCCTTCTGGATGTTGTAGTCGGAG 20924 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828 | |||| | |||| || | || ||||| || | || | ||||||||||| || Sbjct 20923 AGGGTTCGGCCGTCTTCGAGCTGCTTGCCGGCGAAGATTAATCGCTGTTGGTCGGGGGGG 20864 Query 16829 ACGCCCTCTTTGTCGGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTT 16888 | ||||| ||||| ||| | ||| || | | | | |||||||| | |||| Sbjct 20863 ATTCCCTCCTTGTCCTGAATCTTGGACTTGACATTGTCGATAGTGTCGCTAGACTCCACC 20804 Query 16889 TCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 || | |||||| || || || || || || ||||| ||||||||||| Sbjct 20803 TCAAGGGTGATAGTCTTACCCGTGAGGGTCTTGACGAAAATCTGCAT 20757 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 405086035070020