Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Daldinia_20sp._20EC12_20[genbank_20GCA_5F002120325.1_202017-05-11] 398 sequences; 37,551,009 total letters Query= NC_008291.1 Length=198050 Score E Sequences producing significant alignments: (Bits) Value seq10 232 8e-56 seq1 100 4e-16 >seq10 Length=1071462 Score = 232 bits (256), Expect = 8e-56 Identities = 752/1157 (65%), Gaps = 28/1157 (2%) Strand=Plus/Minus Query 62743 CAATGCAACAGATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCATATTGTATTAT 62802 || ||||| ||| |||| || || ||||||||||||| | | ||| || | || || Sbjct 417936 CAGTGCAAGAGACGCCAAGTTGCAGACGGCTACCTCATCGGGAGCCGAGTACTCGATAAT 417877 Query 62803 CTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTT 62862 |||||||| | || || || ||||| | || | || || ||||| ||| Sbjct 417876 TTCAGTGCACAAGTTGGAACTGCGAATAGTTCCAAGGTTCTTCTGGTTGCTCTTGCGGTT 417817 Query 62863 ACACGCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGC 62922 ||| |||||| ||||| ||||| ||| | || || || |||| | || | ||| || Sbjct 417816 ACAGTGATCCTTGTAAAGCATGAAGGGATTTCCGGTCTCGGTCTGGGCCTCCAGAATGGC 417757 Query 62923 TTTCCAGACGACTC-GAGCCTTTA--TTATAG--ATTTGTATCTCTTTTCTCTTTCGTAT 62977 | ||| | | || | ||||| | || | | | | || | ||| | | | | Sbjct 417756 GTACCATA-GCTTCTGGGCCTTAACCTTCTGGCGACCACGACCTTCTGCCTCATACTTCT 417698 Query 62978 AGTGTATACAATCGTTCGAACTCGTCTCCCCAAACATTGTCCAGTCCAGGACATTCATCC 63037 || |||| ||| || || || || | |||| | | || || || || ||| Sbjct 417697 CGT----ACAAGGCTTCAAATTCATCACCGTACACATCGGCAAGACCCGGGCACTCACTA 417642 Query 63038 GGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATC 63097 || ||||| | | ||| || |||| | || || || ||||| || ||||| |||||| Sbjct 417641 GGGCACATGAGGGTCCATTCGCCGTTCTTCTCAACACGCTTCATGAAAAGATCGGGAATC 417582 Query 63098 CAAAGAGCTATAAATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGA 63157 || ||||| | || ||||| | | | || || || || ||||| |||| Sbjct 417581 CAGAGAGCAAGGAAAAGATCGCGAGCACGGACCTCTTCTTTACCGTGGTTCTTGCGAAGA 417522 Query 63158 TCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGC 63217 || |||||| | | | ||| ||||| ||||| | || || || | | || ||| Sbjct 417521 TCAAGGAACTCGAAGACATCCTGGTGCCAGGGTTCGAGATAGATAGCAAAGGCACCGGGC 417462 Query 63218 CGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGA 63277 | ||||| || ||||| || | |||||| |||||||| || |||||| |||||| || Sbjct 417461 CTCTTGTTACCACCCTGGTCAACGTATCTGGCGGTGTTGTTGAAAACTCGCAACATGGGT 417402 Query 63278 ATAATACCATTGGATGTACCATTGGTCCCTGAGATATAGCTTCCACTGGCACGAATATTA 63337 | |||||||| || |||||||| || || | ||| || ||| ||||||| || Sbjct 417401 ACGATACCATTAGAGGTACCATTCGTACCGGCGATGTATGAGCCAGTGGCACGGATGCGG 417342 Query 63338 CTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTA 63397 ||| ||||| || || || || | || ||||| | || || || | || Sbjct 417341 TGAATGTTGAGACCGATACCTCCAGCTGTCTTGGAGATCATGGCACAGGTCTTGAGTGTG 417282 Query 63398 TCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGG 63457 || ||||||||||| ||||| || ||| |||||| | || || ||| | || || Sbjct 417281 TCGTAGATGCCCTCAATACTGTCTTCCTTCATGTCGACTAAGAAGCAGGATGCCAGCTG- 417223 Query 63458 TGACGACT----AGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGAGTAAACCATTTTTC 63513 || || ||||| ||||| || | |||||||||||||| || || |||| Sbjct 417222 ---CGCCTGGGGTGTTCCAGCATTGAAAAGAGTAGGAGAAGCGTGGGTGAAATATTTGCT 417166 Query 63514 AGAAAGTAGATTGTACGTCTCAATAGCTGAGTCTA---TATC-CCATTGATGAATTCCTA 63569 || | || ||||| |||| ||| || |||| |||| || |||| || | Sbjct 417165 GGACATAAGGTTGTAGGTCTGAATGACTTTCTCTACATTATCGCCCCAGATG----CCAA 417110 Query 63570 CTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAACA 63629 | || |||||||| | ||||||||| |||||||| |||||||| | || | || | | Sbjct 417109 CAGCCACACGCATGATCATGTGCTGTGGTCTTTCTACGATCTTCTCATTGAGCTTTAGTA 417050 Query 63630 AGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAA 63689 || || | ||||| || || || ||||| || | ||| |||||||| ||||| | Sbjct 417049 GATAAGACCTCTCCAAGGTCTTGAAGCCAAAGTATTGGTAGTTGAAGTCTCGGTCGTAGA 416990 Query 63690 TAATAACCGAGTTGAGTTTATCCTTATATTTGTTAACTACATCCATGGTAATACTT-GAA 63748 ||| | |||| | | ||||| | | | | || |||| | | | ||| || Sbjct 416989 CAATTGCGGAGTCAAAGTCCTCCTTGTGTCTCATGAC-ACATTCGTATGTCTCCTTGGAG 416931 Query 63749 ATAATAGGAAAATGTTTCCCATTTTTAGGATTGACATAGTTGAATAAATCCTCCATCACT 63808 || |||||| | | ||| || ||||| || ||||||| | | | ||| || || Sbjct 416930 ATCATAGGAGAGGGCTTCATGTTCTTAGGGTTAACATAGTGGTAGAGATCGCTAATGACA 416871 Query 63809 TCACTAAATAGtttttttGTTTCTTTGTGTAGATTTGATACGGCTATTCTAGCGGCTAGA 63868 | || | || || |||| ||||| || || || ||||| || | ||||| || Sbjct 416870 GAAGACCATTGCTTCTTCGTTTGCTTGTGGAGGTTGGACACGGCAATACGTGCGGCAAGG 416811 Query 63869 ATGGCATAATCCGGATG 63885 || ||||||||||| || Sbjct 416810 ATAGCATAATCCGGGTG 416794 >seq1 Length=2525816 Score = 100 bits (110), Expect = 4e-16 Identities = 148/209 (71%), Gaps = 3/209 (1%) Strand=Plus/Plus Query 32661 CATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGT 32720 || ||||| || |||||||||||| || | | || | |||||||| || ||||| Sbjct 592368 CAAGCGAAGTCAGTGTGTAGACCCTCATCACGAGAGATGAGCTCGTTGGAGAAGGTGAGA 592427 Query 32721 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAA 32780 |||||||| || |||||||| || | ||| || ||||| || |||| ||| ||||| Sbjct 592428 CCGGGCATCAGACCACGCTTCTTCAACCAGAAGATGGAGGCGAATGCACCACTGAAGAAG 592487 Query 32781 ATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGGCG---CTGTCATGT 32837 || || || || || || |||||||| || | || || | || | ||||| Sbjct 592488 ATACCCTCGACAGCAGCGAAGGCAATGAGACGCTGAGCAAAGGTGGAGTTCTTGTCAGAA 592547 Query 32838 ATCCACTTTTGAGCCCAATCGGCCTTCTT 32866 ||||| | ||||||| ||||||||||| Sbjct 592548 ATCCATTGCAGAGCCCAGTCGGCCTTCTT 592576 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 633628847680800