Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Daldinia_20sp._20EC12_20[genbank_20GCA_5F002120325.1_202017-05-11] 398 sequences; 37,551,009 total letters Query= NC_008293.1 Length=135454 Score E Sequences producing significant alignments: (Bits) Value seq16 120 3e-22 >seq16 Length=747318 Score = 120 bits (132), Expect = 3e-22 Identities = 164/229 (72%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || ||||| |||||| ||||||| || ||||||| | || || |||||||| Sbjct 127902 ATGCAGATCTTTGTGAAGACTCTGACCGGCAAGACCATCACCTTAGAGGTCGAGTCGTCA 127961 Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118 ||||| ||||| ||||| || || ||||| || || ||||| || |||||| Sbjct 127962 GACACCATCGATAATGTGAAGAGCAAGATTCAGGACAAGGAGGGTATTCCCCCCGACCAA 128021 Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178 ||||| |||| ||||| || || || | ||||| | || || | |||| |||||| Sbjct 128022 CAGCGACTTATCTTTGCGGGTAAGCAGCTGGAAGACGGCCGAACCCTCAGCGACTACAAT 128081 Query 25179 ATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGGAA 25227 || || || ||||| || || ||| | || || | ||| | || |||| Sbjct 128082 ATCCAGAAGGAATCTACCCTTCATCTCGTTCTCCGACTACGTGGTGGAA 128130 Score = 109 bits (120), Expect = 5e-19 Identities = 152/213 (71%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 24998 AATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTC 25057 |||||| || || || ||||| ||||| || || | ||||| | ||||| || || || Sbjct 128129 AATGCAGATCTTCGTCAAGACCTTGACAGGAAAGACGATCACTCTGGAAGTTGAATCATC 128188 Query 25058 TGACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117 ||||| || || | ||| || ||| ||||| ||||| ||||| |||||||| Sbjct 128189 GGACACGATTGACAACGTCAAGAGCAAGATCCAGGACAAGGAAGGTATTCCCCCTGACCA 128248 Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177 ||| || |||| || || || || || || || |||| |||||| | |||| ||||| Sbjct 128249 ACAACGACTTATCTTCGCTGGTAAGCAGTTGGAGGATGGCCGCACTCTAAGCGACTACAA 128308 Query 25178 TATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210 || || || || || ||||| || || ||||| Sbjct 128309 CATCCAGAAGGAGTCGACGCTGCACTTGGTGCT 128341 Score = 89.7 bits (98), Expect = 4e-13 Identities = 139/199 (70%), Gaps = 0/199 (0%) Strand=Plus/Plus Query 25003 AAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCTGACA 25062 ||| | | || ||||| | ||||| || ||||||| |||| |||||||| || |||| Sbjct 127678 AAACAGTCGTCAAGACCCTTACCGGAAAGACCATCACCCTCGAGGTGGAGTCTTCGGACA 127737 Query 25063 CTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAACAGC 25122 | ||||| | ||| || ||| ||||| || || || || || |||||||||| Sbjct 127738 CGATCGACAACGTCAAGTCGAAGATCCAAGACAAGGAGGGTATCCCTCCCGACCAACAGC 127797 Query 25123 GGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAATATTC 25182 | | ||||| |||||||| || | || |||| || || | ||| ||||| |||| Sbjct 127798 GATTGATTTTCGCCGGCAAGCAGCTTGAGGATGGCCGAACCCTATCCGACTACAACATTC 127857 Query 25183 AAAAAGAATCCACGCTACA 25201 | || || || || || || Sbjct 127858 AGAAGGAGTCTACTCTCCA 127876 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433325898088370