Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Daldinia_20sp._20EC12_20[genbank_20GCA_5F002120325.1_202017-05-11] 398 sequences; 37,551,009 total letters Query= NC_008586.1 Length=131204 Score E Sequences producing significant alignments: (Bits) Value seq39 111 1e-19 seq16 107 2e-18 seq24 102 7e-17 >seq39 Length=331608 Score = 111 bits (122), Expect = 1e-19 Identities = 139/191 (73%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| ||||| || || || | || ||||| || |||| ||||| ||||| | | | Sbjct 20757 ATGCAGATTTTCGTCAAGACCCTCACGGGTAAGACTATCACCCTTGAGGTGGAGTCTAGC 20816 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | ||| || |||| || ||||| ||||||||||| || || ||||| ||| Sbjct 20817 GACACTATCGACAATGTCAAGTCCAAGATTCAGGACAAGGAGGGAATCCCCCCCGACCAA 20876 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || || | || || |||||||| ||| | || || ||| ||| ||||||| |||||| Sbjct 20877 CAGCGATTAATCTTCGCCGGCAAGCAGCTCGAAGACGGCCGAACCCTCTCCGACTACAAC 20936 Query 22399 ATTCAAAAAGA 22409 || || || || Sbjct 20937 ATCCAGAAGGA 20947 >seq16 Length=747318 Score = 107 bits (118), Expect = 2e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || ||||| || ||| | ||||| || || |||| | || || || | | Sbjct 127902 ATGCAGATCTTTGTGAAGACTCTGACCGGCAAGACCATCACCTTAGAGGTCGAGTCGTCA 127961 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || ||| | || || | || || ||||| ||||||||||||||||| ||||| ||| Sbjct 127962 GACACCATCGATAATGTGAAGAGCAAGATTCAGGACAAGGAGGGTATTCCCCCCGACCAA 128021 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || || ||||| ||||| || || ||| | || || ||| ||| || ||| ||||| Sbjct 128022 CAGCGACTTATCTTTGCGGGTAAGCAGCTGGAAGACGGCCGAACCCTCAGCGACTACAAT 128081 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGG 22445 || || || ||||| ||| | ||| | ||| | ||| | || || || Sbjct 128082 ATCCAGAAGGAATCTACCCTTCATCTCGTTCTCCGACTACGTGGTGG 128128 Score = 100 bits (110), Expect = 2e-16 Identities = 126/173 (73%), Gaps = 0/173 (0%) Strand=Plus/Plus Query 22243 ACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACCGTGGACGATATCAAACAA 22302 ||||| || || |||| || || ||||| | | || || | ||| | |||| Sbjct 127698 ACCGGAAAGACCATCACCCTCGAGGTGGAGTCTTCGGACACGATCGACAACGTCAAGTCG 127757 Query 22303 AAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAA 22362 || || ||||||||||||||||| || ||||| ||||| || | || || |||||||| Sbjct 127758 AAGATCCAAGACAAGGAGGGTATCCCTCCCGACCAACAGCGATTGATTTTCGCCGGCAAG 127817 Query 22363 CAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGAATCCAC 22415 ||| | |||||| ||| ||| | ||||| ||||||||||| || || || || Sbjct 127818 CAGCTTGAGGATGGCCGAACCCTATCCGACTACAACATTCAGAAGGAGTCTAC 127870 Score = 89.7 bits (98), Expect = 4e-13 Identities = 144/207 (70%), Gaps = 0/207 (0%) Strand=Plus/Plus Query 22216 AAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACC 22275 || ||||| || || || || || | || || || || |||| ||||| ||||| || Sbjct 127380 AACATGCAGATCTTCGTCAAGACCCTCACTGGCAAGACCATCACCCTTGAGGTGGAGTCC 127439 Query 22276 ACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGAT 22335 |||| ||| | ||| || ||||| || ||||| || ||||| || ||||| || || Sbjct 127440 TCCGACACCATCGACAATGTCAAATCGAAGATTCAGGATAAGGAAGGCATTCCTCCTGAC 127499 Query 22336 CAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTAC 22395 || || || | || || || || || || | ||||| ||||| | ||| ||| Sbjct 127500 CAGCAGCGATTGATTTTCGCTGGAAAGCAACTCGAGGACGGTCGCACTCTGAGCGACTAC 127559 Query 22396 AACATTCAAAAAGAATCCACCATACAT 22422 |||||||| || || |||||| | ||| Sbjct 127560 AACATTCAGAAGGAGTCCACCCTCCAT 127586 >seq24 Length=497866 Score = 102 bits (112), Expect = 7e-17 Identities = 127/174 (73%), Gaps = 0/174 (0%) Strand=Plus/Plus Query 22243 ACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACCGTGGACGATATCAAACAA 22302 || || || || |||| || || ||||| | |||| ||| | ||| || |||| Sbjct 474066 ACGGGCAAGACCATCACCCTCGAGGTGGAGTCTTCCGACACCATCGACAATGTCAAGTCC 474125 Query 22303 AAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAA 22362 || || || |||||||||||||| || ||||| ||||| || || || || ||||| || Sbjct 474126 AAGATCCAGGACAAGGAGGGTATCCCCCCCGACCAACAGCGCCTGATCTTCGCCGGAAAG 474185 Query 22363 CAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGAATCCACC 22416 ||| | ||||| ||| ||| ||||||| |||||||| || || || || ||| Sbjct 474186 CAGCTCGAGGACGGCCGAACCCTCTCCGACTACAACATCCAGAAGGAGTCTACC 474239 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419725964056870