Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Daldinia_20sp._20EC12_20[genbank_20GCA_5F002120325.1_202017-05-11] 398 sequences; 37,551,009 total letters Query= NC_008603.1 Length=321240 Score E Sequences producing significant alignments: (Bits) Value seq59 100 6e-16 seq10 87.8 4e-12 >seq59 Length=136285 Score = 100 bits (110), Expect = 6e-16 Identities = 97/122 (80%), Gaps = 2/122 (2%) Strand=Plus/Minus Query 280702 CTCACTCTCGCATTCGCGGTCTTTCTGGAGGCCAGAAGGTCAAACTTGTCATCGGAGCA- 280760 ||||||| || || |||||||| || || || ||| ||||| | ||| ||| || Sbjct 85338 CTCACTCGCGTATGCGCGGTCTCTCCGGTGGTCAGCGTGTCAAGGTCGTCCTCGCTGCTT 85279 Query 280761 GCTCTGTGGCAACACCCTCACGTGATCGTTCTCGACGAGCCTACCAACTATCTGGACCGC 280820 |||| ||||||| |||||| ||||||||||||||||||||||||||||||| ||||| Sbjct 85278 GCTCA-TGGCAACGACCTCACTTGATCGTTCTCGACGAGCCTACCAACTATCTCGACCGT 85220 Query 280821 GA 280822 || Sbjct 85219 GA 85218 >seq10 Length=1071462 Score = 87.8 bits (96), Expect = 4e-12 Identities = 178/262 (68%), Gaps = 2/262 (1%) Strand=Plus/Minus Query 293122 TGATCGACAAAGGCACCACGATCAGCAGCGAGGTCAATCACTGTCTTCATAGAGATCTCC 293181 |||||||||||||||||||| ||||| || | | | | || | |||||| ||| Sbjct 418697 TGATCGACAAAGGCACCACGGTCAGCGGCCATCTGGACGATGGTTCGCTGAGAGATTTCC 418638 Query 293182 CACGATGTCTTGTACACTGCCTTGACATCAGGATGAATGCCAATAACCTTCTGGATAGAC 293241 || |||||||| | || |||| || | | ||||| || ||||| || || Sbjct 418637 CAAACGGTCTTGTAAAGAGCTTTGAGGTCCGAAGGAATGTTTGGAATGTTCTGAATTGAA 418578 Query 293242 CCTCCGTTGGCAATAATCTGGTTCTTCATTGTCTCGGACCA-AGTCCCACGAGCAATGAG 293300 || || | |||||| || |||||||||| | || ||||| || |||| | ||| || Sbjct 418577 CCACCTTCGGCAATGATGCGGTTCTTCATGCTGTCAGACCAGAGACCCATG-TCAACAAG 418519 Query 293301 CTCGCGGACAAGGTAAGAGTTGACAACGGGGAACTCACCAGCGAGAGTGCGACGGCTGTA 293360 || || | ||| ||| ||||| ||||||| ||||| || ||||| ||| Sbjct 418518 GTCTTTGAGCAACCAAGGGTTAACAACTTGGAACTCGCCAGCAAGGACACGACGAGAGTA 418459 Query 293361 AATGTTCGAAGTGATGGGTTCG 293382 |||||||| ||| ||| ||| Sbjct 418458 GATGTTCGACGTGTAGGGCTCG 418437 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1027831558674718