Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Daldinia_20sp._20EC12_20[genbank_20GCA_5F002120325.1_202017-05-11] 398 sequences; 37,551,009 total letters Query= NC_008724.1 Length=288047 Score E Sequences producing significant alignments: (Bits) Value seq16 183 6e-41 seq39 170 4e-37 seq24 154 3e-32 seq1 118 2e-21 >seq16 Length=747318 Score = 183 bits (202), Expect = 6e-41 Identities = 178/229 (78%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 68234 TCCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGA 68293 ||| || || || || | |||||||| ||||| ||||| || |||||||| || ||| Sbjct 128357 TCCACCACGGAGACGAAGCACCAAGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCGCT 128298 Query 68294 GAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGG 68353 || || | ||||| || |||||||| || ||||| || |||| ||||||||| || || Sbjct 128297 TAGAGTGCGGCCATCCTCCAACTGCTTACCAGCGAAGATAAGTCGTTGTTGGTCAGGGGG 128238 Query 68354 AATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTAC 68413 ||| ||||||||||| || ||||| ||||||| || || ||||| | |||||| || Sbjct 128237 AATACCTTCCTTGTCCTGGATCTTGCTCTTGACGTTGTCAATCGTGTCCGATGATTCAAC 128178 Query 68414 TTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCATT 68462 ||||| ||||| || ||||| || | |||||||||||| ||||||||| Sbjct 128177 TTCCAGAGTGATCGTCTTTCCTGTCAAGGTCTTGACGAAGATCTGCATT 128129 Score = 152 bits (168), Expect = 9e-32 Identities = 164/217 (76%), Gaps = 0/217 (0%) Strand=Plus/Minus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || || || || | || | ||| || || ||||| || || ||||| || ||||| Sbjct 127900 CCACCACGGAGACGGAGGACAAGGTGGAGAGTAGACTCCTTCTGAATGTTGTAGTCGGAT 127841 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | ||||| || | |||||| |||||||| || | || ||||||||||| || Sbjct 127840 AGGGTTCGGCCATCCTCAAGCTGCTTGCCGGCGAAAATCAATCGCTGTTGGTCGGGAGGG 127781 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 || || ||||||||||| ||||| | ||||||| ||||| ||||| | || || || Sbjct 127780 ATACCCTCCTTGTCTTGGATCTTCGACTTGACGTTGTCGATCGTGTCCGAAGACTCCACC 127721 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGA 68451 || | ||||||||| ||||| || ||||||||||||| Sbjct 127720 TCGAGGGTGATGGTCTTTCCGGTAAGGGTCTTGACGA 127684 Score = 141 bits (156), Expect = 2e-28 Identities = 153/203 (75%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 68259 TGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTAACTGC 68318 || || |||||||| || || ||||| || ||| || || | || || || | ||| Sbjct 127585 TGGAGGGTGGACTCCTTCTGAATGTTGTAGTCGCTCAGAGTGCGACCGTCCTCGAGTTGC 127526 Query 68319 TTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTT 68378 || || ||||| || | || || ||||| || |||||||||||||| || |||||||| Sbjct 127525 TTTCCAGCGAAAATCAATCGCTGCTGGTCAGGAGGAATGCCTTCCTTATCCTGAATCTTC 127466 Query 68379 GCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTCCCGTG 68438 | ||||| ||||||||||| | || || || || | ||||||||| || || ||| Sbjct 127465 GATTTGACATTGTCGATGGTGTCGGAGGACTCCACCTCAAGGGTGATGGTCTTGCCAGTG 127406 Query 68439 AGGGTCTTGACGAATATCTGCAT 68461 |||||||||||||| |||||||| Sbjct 127405 AGGGTCTTGACGAAGATCTGCAT 127383 Score = 138 bits (152), Expect = 2e-27 Identities = 168/229 (73%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 68233 TTCCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGG 68292 |||| || || || || | || | || || || || || || ||||| || || ||| Sbjct 128130 TTCCACCACGTAGTCGGAGAACGAGATGAAGGGTAGATTCCTTCTGGATATTGTAGTCGC 128071 Query 68293 AGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTG 68352 ||| || | || ||||| | |||||| || || || || |||| ||||||||||| | Sbjct 128070 TGAGGGTTCGGCCGTCTTCCAGCTGCTTACCCGCAAAGATAAGTCGCTGTTGGTCGGGGG 128011 Query 68353 GAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTA 68412 |||| || |||||||| |||||||| ||| || ||||||||||||| || || | Sbjct 128010 GAATACCCTCCTTGTCCTGAATCTTGCTCTTCACATTATCGATGGTGTCTGACGACTCGA 127951 Query 68413 CTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 | || ||||||||||| || || || || ||||| || || |||||||| Sbjct 127950 CCTCTAAGGTGATGGTCTTGCCGGTCAGAGTCTTCACAAAGATCTGCAT 127902 >seq39 Length=331608 Score = 170 bits (188), Expect = 4e-37 Identities = 178/231 (77%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || || ||||| | || | ||| || ||| ||| || |||||||| || |||||| Sbjct 20983 CCACCACGTAGGCGGAGCACAAGGTGGAGGGTGCTCTCCTTCTGGATGTTGTAGTCGGAG 20924 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | || ||||| | |||||| |||||||| || | || ||||||||||| || Sbjct 20923 AGGGTTCGGCCGTCTTCGAGCTGCTTGCCGGCGAAGATTAATCGCTGTTGGTCGGGGGGG 20864 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCT-GATTCTAC 68413 || || |||||||| |||||||| | |||||| ||||| ||||| ||| || || || Sbjct 20863 ATTCCCTCCTTGTCCTGAATCTTGGACTTGACATTGTCGATAGTGTC-GCTAGACTCCAC 20805 Query 68414 TTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCATTAT 68464 || | |||||| || || |||||||||||||||||||| |||||||| || Sbjct 20804 CTCAAGGGTGATAGTCTTACCCGTGAGGGTCTTGACGAAAATCTGCATGAT 20754 >seq24 Length=497866 Score = 154 bits (170), Expect = 3e-32 Identities = 165/218 (76%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || || || || | |||| ||| || || ||||| || |||||||| || |||||| Sbjct 474268 CCACCACGGAGACGGAGGACCAGGTGGAGGGTAGACTCCTTCTGGATGTTGTAGTCGGAG 474209 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | || || || | |||||| |||||||| || || | ||||||||||| || Sbjct 474208 AGGGTTCGGCCGTCCTCGAGCTGCTTTCCGGCGAAGATCAGGCGCTGTTGGTCGGGGGGG 474149 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 || || |||||||| || ||||| | |||||| ||||||||||| | || || || Sbjct 474148 ATACCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATGGTGTCGGAAGACTCCACC 474089 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAA 68452 || | ||||||||| || ||||| |||||||| ||||| Sbjct 474088 TCGAGGGTGATGGTCTTGCCCGTCAGGGTCTTCACGAA 474051 >seq1 Length=2525816 Score = 118 bits (130), Expect = 2e-21 Identities = 312/470 (66%), Gaps = 6/470 (1%) Strand=Plus/Plus Query 9935 CATGACGCCCGCCTTCTGGTACTCCGATACCCGGCGCTCGAAGAAGTTGGACTTGCCCTC 9994 |||||| || ||||||||||| || || || |||||||||||||| |||||| | Sbjct 592064 CATGACACCGGCCTTCTGGTAGTCACCGACACGCTTCTCGAAGAAGTTGGTCTTGCCACC 592123 Query 9995 GAGGGAAATGAGCTCCATGAAGTCAAAGGGGTT-CTCG-GCGCCAAACTGCTTGGGGTAA 10052 ||||||||| |||||||||||| |||||||| | | || | || ||| || Sbjct 592124 AAGGGAAATGTTCTCCATGAAGTCGAAGGGGTTGGTAGATCGGTAGAC--CTTCTCGTTG 592181 Query 10053 CCGAGTGCTGTGAAAATGCGGTCAGCCACGAACTCGATGTACTGGCTCATCAGGTCCGAG 10112 ||||| || | | |||||| || |||||||||||||| || |||||| | | | Sbjct 592182 CCGAGAGCGACCAGTAGGCGGTCGGCGACGAACTCGATGTATTGCTTCATCAAATTGGCG 592241 Query 10113 TTCATGCCAATCATGCGGCAGGGGATGGCGTCGCAAATGAAGTCCTTTTCGTTGGCGACC 10172 |||||||| | || ||||| | || ||| | ||| |||| |||| ||||||| Sbjct 592242 TTCATGCCCAGCAGAGCACAGGGCAGAGCCTCGGTCAGGAATTCCTGTTCGATGGCGACA 592301 Query 10173 GCTTCCTCGACGATGCTCTTTACCACGTCAAGGGACAGCTTGTTCTCGAGCTTCGAATAC 10232 || || || ||| ||| | ||||| | | ||||| ||| | | | Sbjct 592302 GCATCTGTGATGATCTTCTGGATGACGTCCTTGCCGGGGCGGTTCTTGAGGTGTGTGAAT 592361 Query 10233 AGGAGCTCTCCAAACTGCTGGTGGAGGCCCTCGTCGCGGCTGATGAACTCGTTGGACAAA 10292 || || | || | ||| || ||||| || || ||||| ||||||||| || Sbjct 592362 AGTAGGCAAGCGAAGTCAGTGTGTAGACCCTCATCACGAGAGATGAGCTCGTTGGAGAAG 592421 Query 10293 CCCAGACCGGGCATGAGCCCCCGGTTGCGCAGCCAGAAAATGGCGCAGAACGACCCGGAG 10352 ||||||||||| || || || || || |||||| |||| | ||| | || | Sbjct 592422 GTGAGACCGGGCATCAGACCACGCTTCTTCAACCAGAAGATGGAGGCGAATGCACCACTG 592481 Query 10353 AACAGAAGACCCTCCAC-GCACACCCAGGCGACGAGGCGCTCTGCGAAGG 10401 || | | |||||| || ||| | |||| | ||| |||| || |||| Sbjct 592482 AAGAAGATACCCTCGACAGCA-GCGAAGGCAATGAGACGCTGAGCAAAGG 592530 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 921617814928560