Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Daldinia_20sp._20EC12_20[genbank_20GCA_5F002120325.1_202017-05-11] 398 sequences; 37,551,009 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq10 199 7e-46 seq1 194 3e-44 >seq10 Length=1071462 Score = 199 bits (220), Expect = 7e-46 Identities = 501/760 (66%), Gaps = 16/760 (2%) Strand=Plus/Minus Query 244688 GCCAGGTTGCAGACGGCCACCTCCTCCGAGTTGGTGTACTGGACAATCTCGGTGCAGAGG 244747 |||| |||||||||||| ||||| || | | ||||| || ||| || ||||| | | Sbjct 417923 GCCAAGTTGCAGACGGCTACCTCATCGGGAGCCGAGTACTCGATAATTTCAGTGCACAAG 417864 Query 244748 TT---ACTGCACTTGATGGTGCCCAGGTGCTGGTGATTGGACTTGGCGTTGCAGGCGTCC 244804 || ||||| || || || |||| || || ||| |||| ||| ||| ||| Sbjct 417863 TTGGAACTGCGA---ATAGTTCCAAGGTTCTTCTGGTTGCTCTTGCGGTTACAGTGATCC 417807 Query 244805 TTGTAGAGCATGAAGGGCCCCCCGGTCTCGAGCTGGGCGACGAGGACGCTGTTCCAGAGG 244864 ||||| ||||||||||| ||||||||| |||||| | || | | || ||| || Sbjct 417806 TTGTAAAGCATGAAGGGATTTCCGGTCTCGGTCTGGGCCTCCAGAATGGCGTACCATAGC 417747 Query 244865 TCCCTAGCCTTGACCGTCCTGCGAGCCTTGCCCTCTGCCTCGTAGCGGGTGTACAGGGCC 244924 | | ||||| ||| || |||| | || |||||||| || ||||| ||| Sbjct 417746 TTCTGGGCCTTAACCTTCTGGCGACCACGACCTTCTGCCTCATACTTCTCGTACAAGGCT 417687 Query 244925 TCGAACTCGGGGCCCCAGACCTCGTCTAGGCCGGGGCACGACGCCGGGCACATGAGACTC 244984 || || || || | || ||| | || || |||||| ||||||||||| || Sbjct 417686 TCAAATTCATCACCGTACACATCGGCAAGACCCGGGCACTCACTAGGGCACATGAGGGTC 417627 Query 244985 CACTCGCCGCCGTCCTTGACCCTCTGCATGAAGAGGTCGGGGATCCAGAGGGCCTGGAAG 245044 || |||||| | || || | || |||||| || ||||| |||||||| || |||| Sbjct 417626 CATTCGCCGTTCTTCTCAACACGCTTCATGAAAAGATCGGGAATCCAGAGAGCAAGGAAA 417567 Query 245045 AGGTC-----CCTGGTCCTCTGCTCGTCCGAGCCAGTGTTCTTCCTCAGCTCCAAAAAGT 245099 || || | || ||||| || ||| | |||||| | || || | || | Sbjct 417566 AGATCGCGAGCACGGACCTCTTCTTTACCGTG-----GTTCTTGCGAAGATCAAGGAACT 417512 Query 245100 CAAAGACGTCGACGTGCCAGGGCTCCATGTAGACAGCGAGGGCGCCGGGCCGCTTGTTGC 245159 | ||||| || ||||||||| || | |||| ||| | ||| ||||||| |||||| | Sbjct 417511 CGAAGACATCCTGGTGCCAGGGTTCGAGATAGATAGCAAAGGCACCGGGCCTCTTGTTAC 417452 Query 245160 CTCCCTGGTCCACCATCCTCTCGAGCGCGTTGAAGATGCGCAGGGTAGGCACTATGCCGT 245219 | |||||||| || || || |||||| | |||| | || || || || | Sbjct 417451 CACCCTGGTCAACGTATCTGGCGGTGTTGTTGAAAACTCGCAACATGGGTACGATACCAT 417392 Query 245220 TAGAGTGGCCGTTGGTGCCCTTGATGTAGGCGCCCTTGCCCCTGAGGTTGCTGATGGACA 245279 ||||| || || || || |||||| | ||| || | | || | | ||| | Sbjct 417391 TAGAGGTACCATTCGTACCGGCGATGTATGAGCCAGTGGCACGGATGCGGTGAATGTTGA 417332 Query 245280 TGCCTAGTCCGCCGGCGTGCTTGGAGATGAGGGCGCAGCTCTTGATGGTGTCTGCTATGC 245339 || | || || || ||||||||| | ||| ||| |||||| ||||| |||| Sbjct 417331 GACCGATACCTCCAGCTGTCTTGGAGATCATGGCACAGGTCTTGAGTGTGTCGTAGATGC 417272 Query 245340 CCTCCATGCTGTCCGACTTCATGTTGAGCAGAAAGCAGGAGGACAGCTGGGGCTTGGGGC 245399 |||| || ||||| |||||||| || | |||||||| | |||||| | || ||| Sbjct 417271 CCTCAATACTGTCTTCCTTCATGTCGACTAAGAAGCAGGATGCCAGCTGCGCCTGGGGTG 417212 Query 245400 TGCACGAGTTGAACAGAGTGGGGCTGGCGTGGGTAAAGTA 245439 | | | ||||| ||||| || |||||||| || || Sbjct 417211 TTCCAGCATTGAAAAGAGTAGGAGAAGCGTGGGTGAAATA 417172 >seq1 Length=2525816 Score = 194 bits (214), Expect = 3e-44 Identities = 315/444 (71%), Gaps = 21/444 (5%) Strand=Plus/Minus Query 42711 GCCTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCTGGCTC 42770 ||||| | || |||||||| ||||||||| || || |||||||||||||||||| | Sbjct 592510 GCCTTCGCTGCTGTCGAGGGTATCTTCTTCAGTGGTGCATTCGCCTCCATCTTCTGGTTG 592451 Query 42771 AAGCAGAAGGTGTC-GATGCCCGGACTCACCTTCTCGAACGAACTCATCAGCAGGGACGA 42829 ||| || | ||| ||||||||| ||||||||||| ||||| |||||| | || || Sbjct 592450 AAGAAGCGTG-GTCTGATGCCCGGTCTCACCTTCTCCAACGAGCTCATCTCTCGTGATGA 592392 Query 42830 GGGGCTGCATAGGGACTTTGCCTGCCTCCTGTTCTCGAGCCACCTCAGGCACAAGCCCTC 42889 ||| || || | ||||| || ||||| || ||| | ||||||| | || ||| Sbjct 592391 GGGTCTACACACTGACTTCGCTTGCCTACTATTC---ACACACCTCAAGAACCGCCCCGG 592335 Query 42890 GAAGGAGCGGGTCCGGGCCATCATCACGGAGGCCGTGGAGATCGAGAAGGAGTTCCTCAC 42949 ||||| ||| | |||||||| || || || | ||||| |||| ||||| || Sbjct 592334 CAAGGACGTCATCCAGAAGATCATCACAGATGCTGTCGCCATCGAACAGGAATTCCTGAC 592275 Query 42950 GCAGTCGCTGCCC-GTGTCCCTGGTCGGCATGAACCACGACCTCATG-TGCAAGTACATC 43007 || | |||||| ||| | ||| | ||||||||| | | | ||| |||| |||||| Sbjct 592274 CGAGGCTCTGCCCTGTG-CTCTGCTGGGCATGAACGCCAATTTGATGAAGCAA-TACATC 592217 Query 43008 CAGTACGTCGCCGACCATCTCCTGTGCCAGATGGGTCTCAGC--CG----CCTCTACAAC 43061 ||| ||||||||||| || || | | | |||| || || ||||| Sbjct 592216 GAGTTCGTCGCCGACCGCCTACT------GGTCGCTCTCGGCAACGAGAAGGTCTACCGA 592163 Query 43062 ACGCCGTGCCCCTTCGACTTTATGGAGAACATCTCGTTGGAGGGCAAGACCAACTTTTTC 43121 | | |||||||||||| ||||||||||| || | | |||||||||||||| ||| Sbjct 592162 TCTACCAACCCCTTCGACTTCATGGAGAACATTTCCCTTGGTGGCAAGACCAACTTCTTC 592103 Query 43122 GAGAAGCGCGTCGCCGACTACCAG 43145 |||||||| |||| ||||||||| Sbjct 592102 GAGAAGCGTGTCGGTGACTACCAG 592079 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 944334501912480