Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Daldinia_20sp._20EC12_20[genbank_20GCA_5F002120325.1_202017-05-11] 398 sequences; 37,551,009 total letters Query= NC_009898.1 Length=368683 Score E Sequences producing significant alignments: (Bits) Value seq39 131 4e-25 seq16 127 5e-24 seq24 109 1e-18 seq1 98.7 2e-15 >seq39 Length=331608 Score = 131 bits (144), Expect = 4e-25 Identities = 167/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| || || | || || || || | ||||| || || ||||| || ||||||| | Sbjct 20983 CCACCACGTAGGCGGAGCACAAGGTGGAGGGTGCTCTCCTTCTGGATGTTGTAGTCGGAG 20924 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || || || |||||||| | || || || |||||||| | |||||||| ||| Sbjct 20923 AGGGTTCGGCCGTCTTCGAGCTGCTTGCCGGCGAAGATTAATCGCTGTTGGTCGGGGGGG 20864 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 ||||| || || ||||| || || | || || || || |||| ||||| || || || Sbjct 20863 ATTCCCTCCTTGTCCTGAATCTTGGACTTGACATTGTCGATAGTGTCGCTAGACTCCACC 20804 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATTAT 288476 || || ||||| ||||| || || || ||||||||||| |||||||| || Sbjct 20803 TCAAGGGTGATAGTCTTACCCGTGAGGGTCTTGACGAAAATCTGCATGAT 20754 >seq16 Length=747318 Score = 127 bits (140), Expect = 5e-24 Identities = 168/232 (72%), Gaps = 1/232 (0%) Strand=Plus/Minus Query 288242 CATGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGT 288301 |||| ||||| || || | ||| |||||||| | ||| || || || || || |||| Sbjct 127613 CATG-CCACCACGTAGACGAAGGACGAGATGGAGGGTGGACTCCTTCTGAATGTTGTAGT 127555 Query 288302 CGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAAT 288361 || || ||||| ||||| || | ||| ||||| ||||| |||| ||||| || | Sbjct 127554 CGCTCAGAGTGCGACCGTCCTCGAGTTGCTTTCCAGCGAAAATCAATCGCTGCTGGTCAG 127495 Query 288362 CTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATT 288421 || || ||||| |||||||| || |||| ||| || || || || | ||| || | Sbjct 127494 GAGGAATGCCTTCCTTATCCTGAATCTTCGATTTGACATTGTCGATGGTGTCGGAGGACT 127435 Query 288422 CTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 | || || || ||||| ||||| || || || ||||||||||| |||||||| Sbjct 127434 CCACCTCAAGGGTGATGGTCTTGCCAGTGAGGGTCTTGACGAAGATCTGCAT 127383 Score = 127 bits (140), Expect = 5e-24 Identities = 169/232 (73%), Gaps = 2/232 (1%) Strand=Plus/Minus Query 288244 TGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCG 288303 |||||||| ||||| | ||| || | || | ||| || || ||||| || |||||| Sbjct 128359 TGTCCACCACGGAGACGAAGCACCAAGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCG 128300 Query 288304 GCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCT 288363 || ||||| || || || || || || || |||||||| || || ||||| | Sbjct 128299 CTTAGAGTGCGGCCATCCTCCAACTGCTTACCAGCGAAGATAAGTCGTTGTTGGTCAGGG 128240 Query 288364 GGGATTCCTTCTTTATCCTGGATTTTCGCT-TTCACGTTTTCTATAGAATCGCTCGATTC 288422 || || ||||| || |||||||| || ||| || ||||| || || | || ||||| Sbjct 128239 GGAATACCTTCCTTGTCCTGGATCTT-GCTCTTGACGTTGTCAATCGTGTCCGATGATTC 128181 Query 288423 TACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATT 288474 ||||| || ||||||||||| || |||| ||||||||||| ||||||||| Sbjct 128180 AACTTCCAGAGTGATCGTCTTTCCTGTCAAGGTCTTGACGAAGATCTGCATT 128129 Score = 123 bits (136), Expect = 6e-23 Identities = 169/232 (73%), Gaps = 8/232 (3%) Strand=Plus/Minus Query 288246 TCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGC 288305 |||||| || |||| || |||||||||| || ||| || |||||||| |||||| Sbjct 128129 TCCACCACGTAGTCGGAGAACGAGATGAAGGGTAGATTCCTTCTGGATATTGTAGTCGCT 128070 Query 288306 GAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGG 288365 ||| || || |||||||| | || || || || ||||| || |||||||| || || Sbjct 128069 GAGGGTTCGGCCGTCTTCCAGCTGCTTACCCGCAAAGATAAGTCGCTGTTGG---TCGGG 128013 Query 288366 G---ATTCCTTCTTTATCCTGGATTTTCGCT-TTCACGTTTTCTATAGAATCGCTCGATT 288421 | || || || || ||||| || || ||| ||||| || || || | || ||| | Sbjct 128012 GGGAATACCCTCCTTGTCCTGAATCTT-GCTCTTCACATTATCGATGGTGTCTGACGACT 127954 Query 288422 CTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 | || || | ||||| ||||| |||||||||||||| || || |||||||| Sbjct 127953 CGACCTCTAAGGTGATGGTCTTGCCGGTCAGAGTCTTCACAAAGATCTGCAT 127902 >seq24 Length=497866 Score = 109 bits (120), Expect = 1e-18 Identities = 155/218 (71%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| ||||| | || || || || | || || || ||||| || ||||||| | Sbjct 474268 CCACCACGGAGACGGAGGACCAGGTGGAGGGTAGACTCCTTCTGGATGTTGTAGTCGGAG 474209 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || || || ||||| || | || ||||| ||||||||||| |||||||| ||| Sbjct 474208 AGGGTTCGGCCGTCCTCGAGCTGCTTTCCGGCGAAGATCAGGCGCTGTTGGTCGGGGGGG 474149 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 || || || || |||||||| || | || || || || || | ||| || || || Sbjct 474148 ATACCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATGGTGTCGGAAGACTCCACC 474089 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAA 288464 ||||| ||||| ||||| || ||||| ||||| ||||| Sbjct 474088 TCGAGGGTGATGGTCTTGCCCGTCAGGGTCTTCACGAA 474051 >seq1 Length=2525816 Score = 98.7 bits (108), Expect = 2e-15 Identities = 150/211 (71%), Gaps = 2/211 (1%) Strand=Plus/Minus Query 269131 GACGCTATCCCATGTTCTATGATCGGTATGAATGCCGATCTCATGAATCAATATATCGAA 269190 || ||| | || ||| || || | || ||||| ||| || | ||||| ||||| ||||| Sbjct 592273 GAGGCTCTGCCCTGTGCTCTGCTGGGCATGAACGCCAATTTGATGAAGCAATACATCGAG 592214 Query 269191 TTCGTGGCTGATCGTATCTTCACGGCACTCGGTTATGAGAAAGTGTACAATTCGAAGAAT 269250 ||||| || || || | | || ||||| | ||||| || ||| || | || Sbjct 592213 TTCGTCGCCGACCGCCTACTGGTCGCTCTCGGCAACGAGAAGGTCTACCGATCTACCAAC 592154 Query 269251 CCCTTCGCCTTTATGGAACTAATTTCGCTCGAAGGAAAGACGAACTTCTTCGAAAAGCGT 269310 ||||||| ||| ||||| ||||| || | || ||||| ||||||||||| |||||| Sbjct 592153 CCCTTCGACTTCATGGAGAACATTTCCCTTGGTGGCAAGACCAACTTCTTCGAGAAGCGT 592094 Query 269311 GTCAGCGACTATCA-ACGTCCTGGTGTAATG 269340 ||| | ||||| || | | || ||||| ||| Sbjct 592093 GTCGGTGACTACCAGAAGGCC-GGTGTCATG 592064 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1179648384499844