Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Daldinia_20sp._20EC12_20[genbank_20GCA_5F002120325.1_202017-05-11] 398 sequences; 37,551,009 total letters Query= NC_009899.1 Length=344691 Score E Sequences producing significant alignments: (Bits) Value seq1 125 2e-23 >seq1 Length=2525816 Score = 125 bits (138), Expect = 2e-23 Identities = 320/472 (68%), Gaps = 14/472 (3%) Strand=Plus/Minus Query 243289 TTTGCTGAGCGTCTCGTCGCCTGGGTGTGC-GTTGAAGGTATTCTGTTTTCCG-GGAGT- 243345 |||||| |||||||| | |||| | ||| || || ||||| || | ||| | || | Sbjct 592528 TTTGCTCAGCGTCTCATTGCCTTCGC-TGCTGTCGAGGGTAT-CT-TCTTCAGTGGTGCA 592472 Query 243346 TTCTGCGCCATCTTTTGGCTGCGGAACAAAGGTGTGATGCCTGGCCTCGGTCTGTCTAAC 243405 ||| | ||||||| ||| || ||| ||| ||||||| || ||| | || ||| Sbjct 592471 TTCGCCTCCATCTTCTGGTTGAAGAAGCGTGGTCTGATGCCCGGTCTCACCTTCTCCAAC 592412 Query 243406 GAGTTCATCAGTCGCGACGAGGGCCTTCACCAACAGTTCGGTGAGCTTATGTATTCAAAG 243465 ||| ||||| ||| || ||||| || ||| | |||| | || || |||||| | Sbjct 592411 GAGCTCATCTCTCGTGATGAGGGTCTACACACTGACTTCGCTT-GCCTAC-TATTCACA- 592355 Query 243466 CTCCAGAACAAGCTACCATTCGAAACGGTCAAACAAA---TCATCACAGAAGCAGTTGAA 243522 | || || || | || | | |||| || | |||||||||| || || | Sbjct 592354 CACCTCAAGAACCGCCCCGGCAAGGACGTCATCCAGAAGATCATCACAGATGCTGTCGCC 592295 Query 243523 AACGAAAAGGAATTCATTTGCGACGCTATTCCATGCCGGCTTATTGGCATGAACTCTGAA 243582 | |||| |||||||| | ||| ||| | || || || | ||||||||| | | Sbjct 592294 ATCGAACAGGAATTCCTGACCGAGGCTCTGCCCTGTGCTCTGCTGGGCATGAACGCCAAT 592235 Query 243583 CTCATGGGACAGTACATCGAATTCGTAGCCGACCGCATTTTCATCGCGCTTGGTTATGAG 243642 | ||| || |||||||| ||||| ||||||||| | | |||| || || | ||| Sbjct 592234 TTGATGAAGCAATACATCGAGTTCGTCGCCGACCGCCTACTGGTCGCTCTCGGCAACGAG 592175 Query 243643 AAAGTGTACAACTCCAAGAACCCCTTTGCCTTTATGGAGCTCATTTCGCTTCAAGGGAAA 243702 || || ||| || | |||||||| | ||| |||||| |||||| ||| || || Sbjct 592174 AAGGTCTACCGATCTACCAACCCCTTCGACTTCATGGAGAACATTTCCCTTGGTGGCAAG 592115 Query 243703 ACTAACTTCTTCGAAAAGCGTGTCAGTGATTATCA-ACGCCCTGGTGTGATG 243753 || ||||||||||| ||||||||| |||| || || | | || ||||| ||| Sbjct 592114 ACCAACTTCTTCGAGAAGCGTGTCGGTGACTACCAGAAGGCC-GGTGTCATG 592064 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1102874376001300