Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Daldinia_20sp._20EC12_20[genbank_20GCA_5F002120325.1_202017-05-11] 398 sequences; 37,551,009 total letters Query= NC_010240.1 Length=169794 Score E Sequences producing significant alignments: (Bits) Value seq39 107 2e-18 seq16 107 2e-18 >seq39 Length=331608 Score = 107 bits (118), Expect = 2e-18 Identities = 144/198 (73%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 42012 GTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCA 42071 ||||||||||| || || ||||| || | || || || |||| || |||||||| || Sbjct 20953 GTGCTCTCCTTCTGGATGTTGTAGTCGGAGAGGGTTCGGCCGTCTTCGAGCTGCTTGCCG 20894 Query 42072 GCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTG-TTT 42130 ||||| || | |||||| ||||||| || | | |||||||||| ||| | || | || Sbjct 20893 GCGAAGATTAATCGCTGTTGGTCGGGGGGGATTCCCTCCTTGTCC-TGAATCTTGGACTT 20835 Query 42131 GAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGT 42190 || | | | |||||||| || ||||| || | ||||| || || ||||| || || Sbjct 20834 GACATTGTCGATAGTGTCGCTAGACTCCACCTCAAGGGTGATAGTCTTACCCGTGAGGGT 20775 Query 42191 CTTTACAAAGATTTGCAT 42208 ||| || || || ||||| Sbjct 20774 CTTGACGAAAATCTGCAT 20757 >seq16 Length=747318 Score = 107 bits (118), Expect = 2e-18 Identities = 143/196 (73%), Gaps = 2/196 (1%) Strand=Plus/Minus Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076 |||||| ||||| ||||| || |||||| || |||| || || ||||| |||||||| Sbjct 127574 CTCCTTCTGAATGTTGTAGTCGCTCAGAGTGCGACCGTCCTCGAGTTGCTTTCCAGCGAA 127515 Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCG 42135 || | |||||||||||| | || | || ||||| ||| ||| | || | ||||| Sbjct 127514 AATCAATCGCTGCTGGTCAGGAGGAATGCCTTCCTTATCC-TGAATCTTCGATTTGACAT 127456 Query 42136 TCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTA 42195 | | | |||||| || ||||| || | |||||||| ||||| || || ||||| | Sbjct 127455 TGTCGATGGTGTCGGAGGACTCCACCTCAAGGGTGATGGTCTTGCCAGTGAGGGTCTTGA 127396 Query 42196 CAAAGATTTGCATTTT 42211 | ||||| ||||| || Sbjct 127395 CGAAGATCTGCATGTT 127380 Score = 96.9 bits (106), Expect = 4e-15 Identities = 138/192 (72%), Gaps = 2/192 (1%) Strand=Plus/Minus Query 42018 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 42077 ||||| || |||||||| || || || || |||| || ||||||||||| || || Sbjct 128092 TCCTTCTGGATATTGTAGTCGCTGAGGGTTCGGCCGTCTTCCAGCTGCTTACCCGCAAAG 128033 Query 42078 ATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGT-TTGAGCGT 42136 || |||||||| ||||||| || | | |||||||||| ||| | || | || | | Sbjct 128032 ATAAGTCGCTGTTGGTCGGGGGGAATACCCTCCTTGTCC-TGAATCTTGCTCTTCACATT 127974 Query 42137 CGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 42196 | | ||||| ||| || || || | |||||||| ||||| || || ||||| || Sbjct 127973 ATCGATGGTGTCTGACGACTCGACCTCTAAGGTGATGGTCTTGCCGGTCAGAGTCTTCAC 127914 Query 42197 AAAGATTTGCAT 42208 |||||| ||||| Sbjct 127913 AAAGATCTGCAT 127902 Score = 89.7 bits (98), Expect = 6e-13 Identities = 152/218 (70%), Gaps = 2/218 (1%) Strand=Plus/Minus Query 41993 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 42052 ||| | |||||| |||| || |||||| || || ||||| || ||||| || | Sbjct 128345 ACGAAGCACCAAGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCGCTTAGAGTGCGGCC 128286 Query 42053 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTT 42112 || || | ||||||||||||||| || ||||| || ||||| | || | | ||||| Sbjct 128285 ATCCTCCAACTGCTTACCAGCGAAGATAAGTCGTTGTTGGTCAGGGGGAATACCTTCCTT 128226 Query 42113 GTCCATGATTTTTTGTTTGAGCGTCG-CCACCGTGTCGCTCGATTCCACATCGACCGTGA 42171 |||| ||| || |||| ||| | | | |||||| ||||| || || | |||| Sbjct 128225 GTCCTGGATCTTGCTCTTGA-CGTTGTCAATCGTGTCCGATGATTCAACTTCCAGAGTGA 128167 Query 42172 TGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCATT 42209 | || || || || | ||||| || ||||| |||||| Sbjct 128166 TCGTCTTTCCTGTCAAGGTCTTGACGAAGATCTGCATT 128129 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 543210097516320